Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2918.t1
Gene name
Locationscaffold_04:222917..224186
Strand-
Gene length (bp)1269
Transcript length (bp)1110
Coding sequence length (bp)1110
Protein length (aa) 370

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 3.8E-32 105 291
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 8.8E-23 110 270
PF08659 KR KR domain 4.5E-10 106 264

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 64 0.5

Transmembrane Domains

Domain # Start End Length
1 42 61 19
2 66 88 22
3 101 123 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2918.t1
MSSSNPQVLKTTAKPPQTTPGSTNPHTSLLTIDILTSILSKSLLNPFIAWIFVLCLRAHVTPSTDPAWILAVSYA
TAMTVLFVVRIINQRAAYGAPRKVDFEHEVVVITGGASGLGLLIVQMYSMRGASVAVLDIKDVPEKGRDEVFGEG
VLYITCDVADRRALEVARERILQELGTPTIVINCAAARINGLSLLDLPADAFEKTIRTNLLAAFHLYQVFLPGII
AAKSGGTLVTVSSVLGQLSAAGLSDYAASKAGLSALHRTIEAEVRVNPLIKTLLVEVGQMSTPLFDWVRAPNHFF
APILEPVEVAREMVAAIDSGRGGVIRLPFYAKLVNWYAVLPATVQRVARYLSGIDAAVTQSRQTSGKTY*
Coding >Pro_DTO377G3_2|g2918.t1
ATGTCATCTTCAAATCCTCAAGTTCTAAAAACAACAGCCAAACCACCCCAGACAACTCCCGGCTCGACCAATCCA
CACACCAGCCTCCTGACAATCGACATCCTAACAAGCATCCTCTCCAAATCACTACTCAACCCTTTCATAGCCTGG
ATTTTCGTCCTCTGCCTACGCGCCCATGTAACCCCATCAACAGATCCAGCCTGGATCCTCGCTGTAAGCTATGCA
ACGGCCATGACAGTCCTCTTCGTCGTGCGAATTATCAACCAGCGCGCCGCCTACGGCGCCCCGCGAAAAGTCGAT
TTCGAGCATGAGGTCGTGGTCATCACTGGCGGGGCGAGTGGGCTAGGTCTGCTAATTGTGCAAATGTATAGCATG
CGCGGGGCGAGTGTCGCTGTGCTGGATATTAAAGATGTTCCGGAAAAAGGCCGCGATGAGGTCTTTGGGGAGGGC
GTTTTGTATATTACGTGTGACGTCGCGGATAGACGTGCTTTAGAAGTTGCGAGGGAGAGGATTTTGCAAGAGTTA
GGAACACCGACGATCGTTATCAACTGTGCCGCGGCCAGGATCAACGGTCTCTCGCTGCTTGATCTGCCAGCGGAC
GCATTCGAGAAGACAATCCGCACCAATCTCCTAGCGGCTTTCCATCTGTACCAAGTCTTCTTGCCTGGGATCATC
GCAGCAAAGAGTGGAGGAACTCTTGTCACAGTCAGCTCCGTGCTGGGCCAACTGAGTGCCGCGGGACTGTCAGAC
TACGCAGCGAGCAAAGCAGGACTTAGCGCGCTGCATCGGACGATAGAAGCGGAAGTTCGGGTTAACCCGTTGATC
AAGACATTGCTAGTGGAAGTTGGTCAGATGTCGACGCCGTTGTTCGACTGGGTGCGTGCGCCGAATCATTTCTTT
GCGCCAATCCTGGAACCCGTCGAAGTTGCCCGGGAGATGGTGGCAGCGATTGATAGCGGTCGAGGTGGTGTGATC
AGGTTGCCTTTTTATGCAAAGCTCGTGAATTGGTATGCCGTGCTACCCGCTACGGTGCAGCGGGTTGCGAGATAT
CTGAGTGGGATAGATGCTGCTGTTACGCAAAGCCGGCAGACATCTGGGAAGACATATTGA
Transcript >Pro_DTO377G3_2|g2918.t1
ATGTCATCTTCAAATCCTCAAGTTCTAAAAACAACAGCCAAACCACCCCAGACAACTCCCGGCTCGACCAATCCA
CACACCAGCCTCCTGACAATCGACATCCTAACAAGCATCCTCTCCAAATCACTACTCAACCCTTTCATAGCCTGG
ATTTTCGTCCTCTGCCTACGCGCCCATGTAACCCCATCAACAGATCCAGCCTGGATCCTCGCTGTAAGCTATGCA
ACGGCCATGACAGTCCTCTTCGTCGTGCGAATTATCAACCAGCGCGCCGCCTACGGCGCCCCGCGAAAAGTCGAT
TTCGAGCATGAGGTCGTGGTCATCACTGGCGGGGCGAGTGGGCTAGGTCTGCTAATTGTGCAAATGTATAGCATG
CGCGGGGCGAGTGTCGCTGTGCTGGATATTAAAGATGTTCCGGAAAAAGGCCGCGATGAGGTCTTTGGGGAGGGC
GTTTTGTATATTACGTGTGACGTCGCGGATAGACGTGCTTTAGAAGTTGCGAGGGAGAGGATTTTGCAAGAGTTA
GGAACACCGACGATCGTTATCAACTGTGCCGCGGCCAGGATCAACGGTCTCTCGCTGCTTGATCTGCCAGCGGAC
GCATTCGAGAAGACAATCCGCACCAATCTCCTAGCGGCTTTCCATCTGTACCAAGTCTTCTTGCCTGGGATCATC
GCAGCAAAGAGTGGAGGAACTCTTGTCACAGTCAGCTCCGTGCTGGGCCAACTGAGTGCCGCGGGACTGTCAGAC
TACGCAGCGAGCAAAGCAGGACTTAGCGCGCTGCATCGGACGATAGAAGCGGAAGTTCGGGTTAACCCGTTGATC
AAGACATTGCTAGTGGAAGTTGGTCAGATGTCGACGCCGTTGTTCGACTGGGTGCGTGCGCCGAATCATTTCTTT
GCGCCAATCCTGGAACCCGTCGAAGTTGCCCGGGAGATGGTGGCAGCGATTGATAGCGGTCGAGGTGGTGTGATC
AGGTTGCCTTTTTATGCAAAGCTCGTGAATTGGTATGCCGTGCTACCCGCTACGGTGCAGCGGGTTGCGAGATAT
CTGAGTGGGATAGATGCTGCTGTTACGCAAAGCCGGCAGACATCTGGGAAGACATATTGA
Gene >Pro_DTO377G3_2|g2918.t1
ATGTCATCTTCAAATCCTCAAGTTCTAAAAACAACAGCCAAACCACCCCAGACAACTCCCGGCTCGACCAATCCA
CACACCAGCCTCCTGACAATCGACATCCTAACAAGCATCCTCTCCAAATCACTACTCAACCCTTTCATAGCCTGG
ATTTTCGTCCTCTGCCTACGCGCCCATGTAACCCCATCAACAGATCCAGCCTGGATCCTCGCTGTAAGCTATGCA
ACGGCCATGACAGTCCTCTTCGTCGTGCGAATTATCAACCAGCGCGCCGCCTACGGCGCCCCGCGAAAAGTCGAT
TTCGAGCATGAGGTCGTGGTCATCACTGGCGGGGCGAGTGGGCTAGGTCTGCTAATTGTGCAAATGTATAGCATG
CGCGGGGCGAGTGTCGCTGTGCTGGATATTAAAGATGTTCCGGAAAAAGGCCGCGATGAGGTCTTTGGGGAGGGC
GTTTTGTATATTACGTGTGACGTCGCGGATAGACGTGCTTTAGAAGTTGCGAGGGAGAGGATTTTGCAAGAGGTA
GGTTTTGCTTTTTTACTTTTGTTTTCGTTGTGACCTTCGATCCCATATCATCCTACTATTACTGCGGTTCTAGTG
ATTTGAATATTTGGATAAGGTGTTTTCATAGCGCGTTATGGCTTGCTTCAATTGGGGTCTGATTCGCTAAAAATC
TTGCAGTTAGGAACACCGACGATCGTTATCAACTGTGCCGCGGCCAGGATCAACGGTCTCTCGCTGCTTGATCTG
CCAGCGGACGCATTCGAGAAGACAATCCGCACCAATCTCCTAGCGGCTTTCCATCTGTACCAAGTCTTCTTGCCT
GGGATCATCGCAGCAAAGAGTGGAGGAACTCTTGTCACAGTCAGCTCCGTGCTGGGCCAACTGAGTGCCGCGGGA
CTGTCAGACTACGCAGCGAGCAAAGCAGGACTTAGCGCGCTGCATCGGACGATAGAAGCGGAAGTTCGGGTTAAC
CCGTTGATCAAGACATTGCTAGTGGAAGTTGGTCAGATGTCGACGCCGTTGTTCGACTGGGTGCGTGCGCCGAAT
CATTTCTTTGCGCCAATCCTGGAACCCGTCGAAGTTGCCCGGGAGATGGTGGCAGCGATTGATAGCGGTCGAGGT
GGTGTGATCAGGTTGCCTTTTTATGCAAAGCTCGTGAATTGGTATGCCGTGCTACCCGCTACGGTGCAGCGGGTT
GCGAGATATCTGAGTGGGATAGATGCTGCTGTTACGCAAAGCCGGCAGACATCTGGGAAGACATATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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