Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2914.t1
Gene name
Locationscaffold_04:216081..217419
Strand+
Gene length (bp)1338
Transcript length (bp)1227
Coding sequence length (bp)1227
Protein length (aa) 409

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03798 TRAM_LAG1_CLN8 TLC domain 5.1E-54 72 314

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No
GO:0031224 intrinsic component of membrane No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 32 54 22
2 75 94 19
3 109 128 19
4 135 157 22
5 167 186 19
6 199 221 22
7 287 309 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2914.t1
MLDPFPPPPEWLRSFVEPYTLRLNCPTLADHIHEVIAAFAFYLFIHTVLSPRLSPILFPQSYNKLTPRTKLNWDI
HAVSFVQSIVINVAALWVMFFDKERSSMTSGERVFAYTGACGLIQALAVGYFVYDLIVSIVHVRMFGLGMLFHAV
SALWVFSLGFRPFLNYFAPTFILYELSSPFLNIHWFLDKVNMTGSRAQWYNGMALLFSFFACRLVWGSWQTVIVY
MDMWNALQQTWSAAAAPLSEPVSINAHVFYPARDGRLCVNEACARANAEITKFKEHTAGGVPTWLVVTYVGSNLI
LNFLNFYWFSKMVETVLKRFRTPADAAGMKKGTKEPVSAEKDAQLKEDIVHDVVLEAASKLEQQETAILQDELSS
LHEKISSSVDSGLGEELRKRRAELVAKLPLPGA*
Coding >Pro_DTO377G3_2|g2914.t1
ATGTTGGACCCTTTCCCACCGCCTCCGGAATGGCTGCGGAGCTTTGTAGAGCCCTATACCCTCCGGTTGAACTGC
CCGACACTTGCCGACCATATCCACGAGGTTATCGCAGCGTTTGCCTTCTACCTGTTCATCCATACAGTTCTCTCA
CCCCGGCTCTCGCCAATCCTCTTTCCTCAGTCTTACAACAAGCTCACTCCTCGGACGAAGCTGAACTGGGATATC
CATGCTGTCTCTTTTGTTCAGAGCATTGTCATTAACGTTGCCGCCCTGTGGGTCATGTTCTTCGACAAGGAGCGC
AGCTCCATGACCTCCGGTGAGCGGGTCTTCGCGTATACAGGTGCCTGTGGACTTATTCAGGCTTTGGCCGTGGGA
TACTTCGTATATGACCTGATTGTCAGCATTGTGCATGTGCGCATGTTTGGCCTTGGAATGCTTTTCCACGCTGTC
AGCGCCTTGTGGGTGTTTAGTCTAGGCTTTAGACCATTCCTAAACTACTTCGCTCCGACCTTCATCCTCTATGAG
CTCTCCAGCCCATTCCTTAATATCCACTGGTTTCTCGACAAAGTCAACATGACCGGCAGCCGCGCCCAATGGTAT
AACGGCATGGCTTTGCTCTTCAGCTTCTTCGCCTGCCGCCTCGTCTGGGGCAGCTGGCAAACCGTCATTGTGTAC
ATGGACATGTGGAATGCGCTTCAGCAAACCTGGTCTGCAGCTGCAGCCCCACTCTCTGAACCCGTGAGCATCAAC
GCACATGTCTTCTACCCAGCCCGCGATGGTAGATTGTGTGTCAACGAAGCCTGCGCGCGCGCCAATGCCGAGATC
ACCAAGTTCAAGGAGCATACCGCGGGAGGTGTACCAACGTGGCTGGTCGTGACCTACGTCGGATCGAACTTGATC
TTGAACTTCTTGAACTTCTACTGGTTTTCCAAGATGGTCGAGACTGTTCTCAAGCGTTTCCGCACTCCGGCTGAT
GCTGCTGGCATGAAGAAGGGGACGAAAGAGCCTGTTAGCGCAGAGAAGGATGCGCAGCTCAAGGAGGATATTGTG
CATGATGTTGTCCTCGAGGCGGCTTCCAAGCTGGAGCAGCAGGAGACCGCTATTTTGCAGGATGAGCTTTCCTCG
TTGCATGAAAAGATCTCTTCAAGTGTGGACTCAGGTCTCGGGGAGGAGTTGCGGAAACGGAGAGCAGAGCTTGTC
GCGAAGCTTCCTTTGCCTGGTGCTTGA
Transcript >Pro_DTO377G3_2|g2914.t1
ATGTTGGACCCTTTCCCACCGCCTCCGGAATGGCTGCGGAGCTTTGTAGAGCCCTATACCCTCCGGTTGAACTGC
CCGACACTTGCCGACCATATCCACGAGGTTATCGCAGCGTTTGCCTTCTACCTGTTCATCCATACAGTTCTCTCA
CCCCGGCTCTCGCCAATCCTCTTTCCTCAGTCTTACAACAAGCTCACTCCTCGGACGAAGCTGAACTGGGATATC
CATGCTGTCTCTTTTGTTCAGAGCATTGTCATTAACGTTGCCGCCCTGTGGGTCATGTTCTTCGACAAGGAGCGC
AGCTCCATGACCTCCGGTGAGCGGGTCTTCGCGTATACAGGTGCCTGTGGACTTATTCAGGCTTTGGCCGTGGGA
TACTTCGTATATGACCTGATTGTCAGCATTGTGCATGTGCGCATGTTTGGCCTTGGAATGCTTTTCCACGCTGTC
AGCGCCTTGTGGGTGTTTAGTCTAGGCTTTAGACCATTCCTAAACTACTTCGCTCCGACCTTCATCCTCTATGAG
CTCTCCAGCCCATTCCTTAATATCCACTGGTTTCTCGACAAAGTCAACATGACCGGCAGCCGCGCCCAATGGTAT
AACGGCATGGCTTTGCTCTTCAGCTTCTTCGCCTGCCGCCTCGTCTGGGGCAGCTGGCAAACCGTCATTGTGTAC
ATGGACATGTGGAATGCGCTTCAGCAAACCTGGTCTGCAGCTGCAGCCCCACTCTCTGAACCCGTGAGCATCAAC
GCACATGTCTTCTACCCAGCCCGCGATGGTAGATTGTGTGTCAACGAAGCCTGCGCGCGCGCCAATGCCGAGATC
ACCAAGTTCAAGGAGCATACCGCGGGAGGTGTACCAACGTGGCTGGTCGTGACCTACGTCGGATCGAACTTGATC
TTGAACTTCTTGAACTTCTACTGGTTTTCCAAGATGGTCGAGACTGTTCTCAAGCGTTTCCGCACTCCGGCTGAT
GCTGCTGGCATGAAGAAGGGGACGAAAGAGCCTGTTAGCGCAGAGAAGGATGCGCAGCTCAAGGAGGATATTGTG
CATGATGTTGTCCTCGAGGCGGCTTCCAAGCTGGAGCAGCAGGAGACCGCTATTTTGCAGGATGAGCTTTCCTCG
TTGCATGAAAAGATCTCTTCAAGTGTGGACTCAGGTCTCGGGGAGGAGTTGCGGAAACGGAGAGCAGAGCTTGTC
GCGAAGCTTCCTTTGCCTGGTGCTTGA
Gene >Pro_DTO377G3_2|g2914.t1
ATGTTGGACCCTTTCCCACCGCCTCCGGAATGGCTGCGGAGCTTTGTAGAGCCCTATACCCTCCGGTTGAACTGC
CCGACACTTGCCGACCATATCCACGAGGTTATCGCAGCGTTTGCCTTCTACCTGTTCATCCATACAGTTCTCTCA
CCCCGGCTCTCGCCAATCCTCTTTCCTCAGTCTTACAACAAGCTCACTCCTCGGACGAAGCTGAACTGGGATATC
CATGCTGTCTCTTTTGTTCAGAGCATTGTCATTAACGTTGCCGCCCTGTGGGTCATGTTCTTCGACAAGGAGCGC
AGCTCCATGACCTCCGGTGAGCGGGTCTTCGCGTATACAGGTGCCTGTGGACTTATTCAGGCTTTGGCCGTGGGA
TACTTCGTATATGACCTGATTGTCAGCATTGTGCATGTGCGCATGTTTGGCCTTGGAATGCTTTTCCACGCTGTC
AGCGCCTTGTGGGTGTTTAGTCTAGGCTTTGTAAGTTGCGTCTCCAATCTGCCTGATATAGGTACATTCAGTATC
AAGAAGATCAGCATAAATGCGTTTTCATTTTTTAAAATCGAGAAACATCTAACATAGTTTCCGCAGAGACCATTC
CTAAACTACTTCGCTCCGACCTTCATCCTCTATGAGCTCTCCAGCCCATTCCTTAATATCCACTGGTTTCTCGAC
AAAGTCAACATGACCGGCAGCCGCGCCCAATGGTATAACGGCATGGCTTTGCTCTTCAGCTTCTTCGCCTGCCGC
CTCGTCTGGGGCAGCTGGCAAACCGTCATTGTGTACATGGACATGTGGAATGCGCTTCAGCAAACCTGGTCTGCA
GCTGCAGCCCCACTCTCTGAACCCGTGAGCATCAACGCACATGTCTTCTACCCAGCCCGCGATGGTAGATTGTGT
GTCAACGAAGCCTGCGCGCGCGCCAATGCCGAGATCACCAAGTTCAAGGAGCATACCGCGGGAGGTGTACCAACG
TGGCTGGTCGTGACCTACGTCGGATCGAACTTGATCTTGAACTTCTTGAACTTCTACTGGTTTTCCAAGATGGTC
GAGACTGTTCTCAAGCGTTTCCGCACTCCGGCTGATGCTGCTGGCATGAAGAAGGGGACGAAAGAGCCTGTTAGC
GCAGAGAAGGATGCGCAGCTCAAGGAGGATATTGTGCATGATGTTGTCCTCGAGGCGGCTTCCAAGCTGGAGCAG
CAGGAGACCGCTATTTTGCAGGATGAGCTTTCCTCGTTGCATGAAAAGATCTCTTCAAGTGTGGACTCAGGTCTC
GGGGAGGAGTTGCGGAAACGGAGAGCAGAGCTTGTCGCGAAGCTTCCTTTGCCTGGTGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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