© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g2904.t1 |
| Gene name | |
| Location | scaffold_04:191443..192106 |
| Strand | - |
| Gene length (bp) | 663 |
| Transcript length (bp) | 663 |
| Coding sequence length (bp) | 663 |
| Protein length (aa) | 221 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02096 | 60KD_IMP | 60Kd inner membrane protein | 3.8E-09 | 12 | 186 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0032977 | membrane insertase activity | Yes |
| GO:0140104 | molecular carrier activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0140597 | protein carrier chaperone | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 47 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 21 | 40 | 19 |
| 2 | 99 | 118 | 19 |
| 3 | 138 | 160 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g2904.t1 MGKELYGNIRKRTAELHKRWGVSGKHKAIAFLQIPVFIALMDSLRGMSGNNRGIIAWLSSFIESQDPASAAQSLH LTIEPTLANEGALWFPDLLAGDPTGVLPFCLTASILGNVLLGWKVKPWKTISFLPKNEMYKQLSFTGLRSFVIVL TCYIGFASFVQELPTALMLYWITSTNFATLQTWVLDNKVFSPVEIGVYKKQAIVFERPGDNDPFQLKNLR* |
| Coding | >Pro_DTO377G3_2|g2904.t1 ATGGGTAAAGAATTATATGGCAATATAAGGAAACGAACAGCTGAGCTTCATAAGCGTTGGGGAGTATCCGGAAAG CACAAAGCAATCGCCTTCCTGCAGATACCTGTCTTTATTGCGCTTATGGACAGTCTGCGTGGGATGAGCGGTAAC AATCGTGGTATCATTGCCTGGCTATCGTCGTTCATCGAGTCGCAAGACCCTGCCTCCGCAGCCCAATCTTTGCAT TTAACCATCGAGCCCACTCTTGCGAACGAGGGTGCCCTCTGGTTCCCGGACTTGCTGGCCGGTGACCCCACAGGC GTGCTGCCATTTTGTCTGACTGCGTCGATATTGGGGAACGTTCTGCTGGGATGGAAAGTCAAGCCTTGGAAGACG ATTTCGTTCCTCCCAAAGAACGAGATGTACAAGCAGCTCTCTTTCACCGGTTTGCGGTCCTTTGTCATAGTCTTG ACATGCTATATTGGATTTGCGAGCTTTGTTCAAGAGTTACCAACTGCACTTATGCTCTACTGGATCACCAGTACC AATTTTGCCACGCTGCAAACCTGGGTACTTGACAATAAGGTGTTTTCACCGGTAGAGATTGGCGTATACAAAAAG CAAGCCATTGTTTTCGAGAGGCCGGGCGATAATGATCCTTTCCAGTTGAAAAACTTGCGCTGA |
| Transcript | >Pro_DTO377G3_2|g2904.t1 ATGGGTAAAGAATTATATGGCAATATAAGGAAACGAACAGCTGAGCTTCATAAGCGTTGGGGAGTATCCGGAAAG CACAAAGCAATCGCCTTCCTGCAGATACCTGTCTTTATTGCGCTTATGGACAGTCTGCGTGGGATGAGCGGTAAC AATCGTGGTATCATTGCCTGGCTATCGTCGTTCATCGAGTCGCAAGACCCTGCCTCCGCAGCCCAATCTTTGCAT TTAACCATCGAGCCCACTCTTGCGAACGAGGGTGCCCTCTGGTTCCCGGACTTGCTGGCCGGTGACCCCACAGGC GTGCTGCCATTTTGTCTGACTGCGTCGATATTGGGGAACGTTCTGCTGGGATGGAAAGTCAAGCCTTGGAAGACG ATTTCGTTCCTCCCAAAGAACGAGATGTACAAGCAGCTCTCTTTCACCGGTTTGCGGTCCTTTGTCATAGTCTTG ACATGCTATATTGGATTTGCGAGCTTTGTTCAAGAGTTACCAACTGCACTTATGCTCTACTGGATCACCAGTACC AATTTTGCCACGCTGCAAACCTGGGTACTTGACAATAAGGTGTTTTCACCGGTAGAGATTGGCGTATACAAAAAG CAAGCCATTGTTTTCGAGAGGCCGGGCGATAATGATCCTTTCCAGTTGAAAAACTTGCGCTGA |
| Gene | >Pro_DTO377G3_2|g2904.t1 ATGGGTAAAGAATTATATGGCAATATAAGGAAACGAACAGCTGAGCTTCATAAGCGTTGGGGAGTATCCGGAAAG CACAAAGCAATCGCCTTCCTGCAGATACCTGTCTTTATTGCGCTTATGGACAGTCTGCGTGGGATGAGCGGTAAC AATCGTGGTATCATTGCCTGGCTATCGTCGTTCATCGAGTCGCAAGACCCTGCCTCCGCAGCCCAATCTTTGCAT TTAACCATCGAGCCCACTCTTGCGAACGAGGGTGCCCTCTGGTTCCCGGACTTGCTGGCCGGTGACCCCACAGGC GTGCTGCCATTTTGTCTGACTGCGTCGATATTGGGGAACGTTCTGCTGGGATGGAAAGTCAAGCCTTGGAAGACG ATTTCGTTCCTCCCAAAGAACGAGATGTACAAGCAGCTCTCTTTCACCGGTTTGCGGTCCTTTGTCATAGTCTTG ACATGCTATATTGGATTTGCGAGCTTTGTTCAAGAGTTACCAACTGCACTTATGCTCTACTGGATCACCAGTACC AATTTTGCCACGCTGCAAACCTGGGTACTTGACAATAAGGTGTTTTCACCGGTAGAGATTGGCGTATACAAAAAG CAAGCCATTGTTTTCGAGAGGCCGGGCGATAATGATCCTTTCCAGTTGAAAAACTTGCGCTGA |