Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2901.t1
Gene name
Locationscaffold_04:182656..183838
Strand-
Gene length (bp)1182
Transcript length (bp)942
Coding sequence length (bp)942
Protein length (aa) 314

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04193 PQ-loop PQ loop repeat 7.0E-17 15 70
PF04193 PQ-loop PQ loop repeat 3.1E-19 217 271

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22
2 59 81 22
3 175 197 22
4 212 231 19
5 244 266 22
6 281 303 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2901.t1
MEQGPIPLTAREAASGLLGSVSMTCWFFLLVPQLIENYRNGNSEAISLLFLFVWFVGDVANLAGGLLAGLVPVIV
AIAVYFCMADGVLIAQCLYYKVRNSRPEPLHRRRSSTVSVEPTTPLLGRRFSESIASRRRSSGSLRRYHTGGRRE
SEVEDTLAKIVEENDYGRKAWIKNFTSVVGIFLIGATGWTMAWQTGMWAPAPLDNNNGSEEAVGGLLLGYFSAVC
YLGARLPQIYKNWSEKSCEGLSLLFFILSLMGNLTYGAGILCHSTEKEYFLTNLPWLIGSLGTIVEDAVIFFQFR
IYAVQDPHLSAIS*
Coding >Pro_DTO377G3_2|g2901.t1
ATGGAACAAGGCCCTATACCTTTAACAGCCCGTGAGGCTGCATCTGGTCTCTTGGGCTCAGTCTCTATGACCTGC
TGGTTTTTCCTTTTGGTACCTCAACTAATTGAGAATTATCGCAATGGCAACTCAGAGGCTATATCTCTCCTCTTC
CTCTTTGTTTGGTTCGTCGGCGATGTCGCAAACCTTGCTGGTGGCCTACTAGCCGGGCTTGTGCCCGTGATCGTT
GCGATCGCGGTATACTTCTGTATGGCAGACGGCGTGCTCATCGCGCAATGTTTGTACTATAAAGTGCGCAACTCG
CGTCCCGAGCCTCTCCACCGCCGACGCTCGTCCACCGTCTCTGTGGAGCCGACTACCCCGTTGCTGGGGCGGCGA
TTCAGCGAATCTATCGCGTCGCGGCGCCGGTCGTCGGGCTCACTGCGCCGGTATCACACTGGTGGCCGGCGCGAG
AGTGAGGTCGAGGATACCCTGGCCAAGATCGTCGAGGAGAATGATTATGGCCGCAAGGCATGGATCAAGAATTTT
ACTAGTGTTGTTGGAATTTTCCTCATTGGTGCGACTGGTTGGACCATGGCTTGGCAGACCGGGATGTGGGCGCCG
GCGCCTTTGGATAATAACAATGGTTCTGAGGAGGCTGTTGGGGGGCTGCTGCTGGGGTATTTCAGCGCCGTGTGC
TATCTGGGAGCGAGATTGCCTCAGATCTATAAGAACTGGAGCGAGAAGTCGTGCGAAGGGTTGTCGCTCTTGTTC
TTTATTCTCTCTCTTATGGGAAACCTGACTTACGGTGCAGGAATTCTTTGCCATTCTACAGAGAAAGAGTATTTC
CTCACCAATCTTCCTTGGCTTATTGGATCGCTGGGAACTATTGTTGAGGATGCCGTCATCTTCTTCCAATTCCGG
ATCTACGCTGTTCAAGACCCTCATCTCTCGGCGATCTCCTAA
Transcript >Pro_DTO377G3_2|g2901.t1
ATGGAACAAGGCCCTATACCTTTAACAGCCCGTGAGGCTGCATCTGGTCTCTTGGGCTCAGTCTCTATGACCTGC
TGGTTTTTCCTTTTGGTACCTCAACTAATTGAGAATTATCGCAATGGCAACTCAGAGGCTATATCTCTCCTCTTC
CTCTTTGTTTGGTTCGTCGGCGATGTCGCAAACCTTGCTGGTGGCCTACTAGCCGGGCTTGTGCCCGTGATCGTT
GCGATCGCGGTATACTTCTGTATGGCAGACGGCGTGCTCATCGCGCAATGTTTGTACTATAAAGTGCGCAACTCG
CGTCCCGAGCCTCTCCACCGCCGACGCTCGTCCACCGTCTCTGTGGAGCCGACTACCCCGTTGCTGGGGCGGCGA
TTCAGCGAATCTATCGCGTCGCGGCGCCGGTCGTCGGGCTCACTGCGCCGGTATCACACTGGTGGCCGGCGCGAG
AGTGAGGTCGAGGATACCCTGGCCAAGATCGTCGAGGAGAATGATTATGGCCGCAAGGCATGGATCAAGAATTTT
ACTAGTGTTGTTGGAATTTTCCTCATTGGTGCGACTGGTTGGACCATGGCTTGGCAGACCGGGATGTGGGCGCCG
GCGCCTTTGGATAATAACAATGGTTCTGAGGAGGCTGTTGGGGGGCTGCTGCTGGGGTATTTCAGCGCCGTGTGC
TATCTGGGAGCGAGATTGCCTCAGATCTATAAGAACTGGAGCGAGAAGTCGTGCGAAGGGTTGTCGCTCTTGTTC
TTTATTCTCTCTCTTATGGGAAACCTGACTTACGGTGCAGGAATTCTTTGCCATTCTACAGAGAAAGAGTATTTC
CTCACCAATCTTCCTTGGCTTATTGGATCGCTGGGAACTATTGTTGAGGATGCCGTCATCTTCTTCCAATTCCGG
ATCTACGCTGTTCAAGACCCTCATCTCTCGGCGATCTCCTAA
Gene >Pro_DTO377G3_2|g2901.t1
ATGGAACAAGGCCCTATACCTTTAACAGCCCGTGAGGCTGCATCTGGTCTCTTGGGCTCAGTCTCTATGACCTGC
TGGTTTTTCCTTTTGGTATGTTTAGCAACCAGACTCGCACCTCGAAATCCAAAGTGGACACAATCCATATCTAAC
AATACTGTTTCAGGTACCTCAACTAATTGAGAATTATCGCAATGGCAACTCAGAGGCTATATCTCTCCTCTTCCT
CTTTGTTTGGTTCGTCGGCGATGTCGCAAACCTTGCTGGTGGCCTACTAGCCGGGCTTGTGCCCGTGATCGTTGC
GATCGCGGTATACTTCTGTATGGCAGACGGCGTGCTCATCGCGCAATGTTTGTACTATAAAGTGCGCAACTCGCG
TCCCGAGCCTCTCCACCGCCGACGCTCGTCCACCGTCTCTGTGGAGCCGACTACCCCGTTGCTGGGGCGGCGATT
CAGCGAATCTATCGCGTCGCGGCGCCGGTCGTCGGGCTCACTGCGCCGGTATCACACTGGTGGCCGGCGCGAGAG
TGAGGTCGAGGATACCCTGGCCAAGATCGTCGAGGAGAATGATTATGGCCGCAAGGCATGGATCAAGAATTTTAC
TAGTGTTGTTGGAATTTTCCTCATTGGTGCGACTGGTTGGACCATGGCTTGGCAGACCGGGATGTGGGCGCCGGC
GCCTTTGGATAATAACAATGGTTCTGAGGAGGCTGTTGGGGGGCTGCTGCTGGGGTATTTCAGCGCCGTGTGCTA
TCTGGGGTGAGTGTCTCCTGCCGTTATGGCTGATGAGTTGGTATTGACTTTGATTCCAGAGCGAGATTGCCTCAG
ATCTATAAGAACTGGAGCGAGAAGTCGTGCGAAGGTATTTTTTCACTGTCTTCACATGCACGTATCAGGCCGGTA
TTGACTTTGATCTAGGGTTGTCGCTCTTGTTCTTTATTCTCTCTCTTATGGGAAACCTGACTTACGGTGCAGGAG
TGAGTGATACTACACGTTGTACTATAAACTGGACATAAGCTAATGGTGTTCATATAGATTCTTTGCCATTCTACA
GAGAAAGAGTATTTCCTCACCAATCTTCCTTGGCTTATTGGATCGCTGGGAACTATTGTTGAGGATGCCGTCATC
TTCTTCCAATTCCGGATCTACGCTGTTCAAGACCCTCATCTCTCGGCGATCTCCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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