Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g2894.t1
Gene name
Location	scaffold_04:160631..162990
Strand	+
Gene length (bp)	2359
Transcript length (bp)	2307
Coding sequence length (bp)	2307
Protein length (aa)	769

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00096	zf-C2H2	Zinc finger, C2H2 type	4.3E-06	532	554
PF00096	zf-C2H2	Zinc finger, C2H2 type	7.0E-03	560	582
PF13894	zf-C2H2_4	C2H2-type zinc finger	4.8E-04	532	554
PF13912	zf-C2H2_6	C2H2-type zinc finger	4.3E-04	532	556
PF12874	zf-met	Zinc-finger of C2H2 type	2.5E-02	532	554

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 49	0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class (based on PFAM domains)
C2H2 zinc finger

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
3d_25C	Three days - 25 degrees Celsius	27.40	16.17	38.63
5d_25C	Five days - 25 degrees Celsius	23.47	13.58	33.36
7d_25C	Seven days - 25 degrees Celsius	22.08	12.65	31.50
10d_25C	Ten days - 25 degrees Celsius	18.05	9.95	26.16
7d_15C	Seven days - 15 degrees Celsius	26.35	15.49	37.22
7d_30C	Seven days - 30 degrees Celsius	22.72	12.99	32.44

Differential expression

Label1	Label2	Q-value	Significant difference
3d_25C	5d_25C	0.579997	no
3d_25C	7d_25C	0.411873	no
3d_25C	7d_15C	0.911984	no
3d_25C	7d_30C	0.495185	no
3d_25C	10d_25C	0.078462	no
5d_25C	7d_25C	0.854926	no
5d_25C	7d_15C	0.695774	no
5d_25C	7d_30C	0.927469	no
5d_25C	10d_25C	0.316786	no
7d_25C	7d_15C	0.521994	no
7d_25C	7d_30C	0.937775	no
7d_25C	10d_25C	0.480026	no
7d_15C	7d_30C	0.606254	no
7d_15C	10d_25C	0.115508	no
7d_30C	10d_25C	0.404918	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g2894.t1 MTSHDQNHGTAYCPEHDQNHGAVYCSEDMKHRSISPSPHGQQYHDPNPGGLGVDPSSMAAYSTNLSYQNPDGSIG GAEIYGYPNYLTGAPLTQTLSPLGGQGYAPTINTNLPISQSFETSLVNQLEHSSTGMRRMQGDENFSNMLNSNHP ELDFSLYQNHSPNSASTPEYDSSLLLDPQMQQHQSINQAINPADLVSPISNPSVSSHPSQDQQHSSPGPMSPPGS TPGAYYTPRHSRHTSLDPATAAYLSAQSGPDWQSVMNNVSFQGHRRAPSEVSEVSSASHSPYLSQHEFDGIENNA SPSLIPQNDPNLYDNGLGMESFTLSEQHQQGISPLHSPYISPRLMPQQGNEMVPNNSYLTQFPSAPTDMYGMPQE DMMNMGQLNNIPGDIGQASQMAPPSINVEFAPPSRAPSFGPAKSTADFDSLSPPAMRSRVRSKSDPYHPASRPRS PATSAASLGPRAPATPRSLSPVGSIGSRSSPSSRDPSPSRSNRRLSTSSIENRNYILDLADPQRPGAVPGEPKRI QKHPATFQCTLCPKRFTRAYNLRSHLRTHTDERPFVCTVCGKAFARQHDRKRHEGLHSGEKKFVCRGELSRSGQW GCGRRFARADALGRHFRSEAGRVCIKPLLDEESRERDRVLLEHQQQQQQSPSGHLQPIPQPLVMPNMPGMDGQST GNFILPAALLAQYPALQTLQWDQISAVGDDPSDIGGRSSFDASSGGEFGFDEDDSGMGGYGNNQGGMYGVDNSGQ MLGVNSGDPGYSDQKWTG*
Coding	>Pro_DTO377G3_2\|g2894.t1 ATGACCTCCCATGACCAGAACCACGGCACGGCCTATTGTCCGGAGCATGACCAGAACCACGGCGCGGTCTATTGT TCGGAAGATATGAAGCATCGGAGCATAAGCCCTTCGCCGCACGGCCAACAATATCACGACCCCAACCCCGGTGGA TTAGGAGTTGACCCCTCCTCCATGGCCGCTTATTCCACAAACCTCTCCTATCAGAATCCCGACGGCAGCATTGGC GGTGCTGAGATATATGGATACCCAAACTACCTTACCGGGGCGCCTTTGACACAGACATTATCACCGCTGGGGGGC CAGGGCTATGCTCCAACCATCAATACCAACCTTCCGATATCGCAGTCGTTCGAGACAAGCCTGGTCAATCAGCTC GAGCACTCTTCGACGGGAATGAGACGGATGCAGGGCGATGAAAACTTCTCCAATATGCTCAACTCCAATCACCCA GAATTGGACTTCTCTCTCTACCAGAATCACAGCCCCAACAGCGCTTCCACCCCCGAGTACGATTCTTCGTTATTG CTAGACCCGCAAATGCAACAGCATCAGTCTATCAACCAAGCGATAAACCCCGCTGATCTAGTCAGCCCCATCTCC AATCCTTCTGTATCCTCGCATCCATCACAAGATCAGCAACATTCCTCACCTGGCCCCATGTCCCCTCCAGGGTCC ACGCCGGGTGCATACTATACCCCTCGGCATTCACGACACACTTCGCTTGACCCGGCTACTGCGGCGTATTTGAGC GCCCAGTCAGGTCCAGACTGGCAGTCGGTTATGAATAATGTTTCCTTCCAAGGCCATCGACGTGCACCGTCCGAG GTGTCCGAAGTATCGTCGGCCAGCCACTCCCCTTATTTGTCTCAGCACGAATTCGATGGCATTGAGAACAATGCA TCGCCTTCTTTGATTCCCCAAAATGATCCAAATCTTTACGACAATGGCCTAGGCATGGAATCATTTACGTTATCG GAACAGCATCAGCAGGGGATCAGTCCTCTCCACAGCCCATATATCTCTCCGCGGTTGATGCCACAACAGGGGAAT GAGATGGTGCCGAATAATTCATATCTCACTCAGTTCCCCTCTGCGCCGACAGACATGTACGGAATGCCCCAAGAA GACATGATGAACATGGGCCAATTGAATAACATCCCGGGCGACATTGGTCAAGCTTCACAGATGGCTCCTCCATCG ATCAATGTTGAGTTTGCCCCGCCATCACGAGCTCCAAGCTTCGGCCCAGCCAAATCAACGGCAGACTTTGACTCA CTGAGCCCTCCGGCTATGCGATCCCGTGTTCGTAGCAAATCTGATCCTTATCACCCTGCTTCCCGCCCACGCTCT CCTGCAACTTCAGCAGCTTCTCTAGGGCCCCGCGCACCTGCCACCCCACGATCTTTGTCCCCTGTTGGATCGATT GGTTCGCGCAGTAGTCCCAGTTCGCGAGATCCCTCGCCCTCACGATCAAACCGACGCCTCTCCACCTCATCAATC GAGAACCGGAACTACATCCTAGATCTCGCCGATCCACAAAGGCCCGGAGCAGTACCCGGGGAGCCAAAAAGAATT CAGAAACACCCAGCTACCTTCCAGTGCACCCTATGTCCGAAACGGTTTACCCGCGCATACAACCTGCGATCCCAC CTCCGCACCCACACCGACGAACGACCATTTGTGTGCACAGTATGCGGCAAAGCATTCGCACGGCAGCACGACCGC AAACGCCACGAAGGCCTCCATTCCGGCGAAAAGAAATTCGTCTGCCGCGGCGAGCTCTCGCGAAGCGGACAATGG GGCTGCGGCCGCCGCTTCGCCCGTGCGGACGCTTTGGGCCGCCACTTCCGCTCCGAGGCGGGCCGGGTATGCATC AAGCCTCTTCTGGATGAGGAATCGCGAGAGCGTGACCGCGTCTTGCTAGAGCACCAGCAGCAACAGCAACAATCG CCATCCGGCCATCTCCAGCCAATCCCCCAGCCGCTCGTTATGCCCAACATGCCCGGCATGGATGGGCAATCGACG GGCAACTTTATTCTTCCTGCTGCTCTTCTGGCGCAATACCCGGCTTTGCAGACATTGCAGTGGGACCAGATTTCG GCTGTGGGTGATGATCCGAGTGATATTGGTGGGCGGAGTAGCTTTGATGCTAGCTCTGGTGGAGAATTTGGCTTT GACGAGGATGATTCGGGGATGGGCGGTTATGGTAATAACCAAGGGGGTATGTACGGTGTCGATAACTCTGGTCAG ATGCTGGGGGTCAATTCTGGGGACCCTGGGTACTCTGATCAGAAGTGGACTGGATGA
Transcript	>Pro_DTO377G3_2\|g2894.t1 ATGACCTCCCATGACCAGAACCACGGCACGGCCTATTGTCCGGAGCATGACCAGAACCACGGCGCGGTCTATTGT TCGGAAGATATGAAGCATCGGAGCATAAGCCCTTCGCCGCACGGCCAACAATATCACGACCCCAACCCCGGTGGA TTAGGAGTTGACCCCTCCTCCATGGCCGCTTATTCCACAAACCTCTCCTATCAGAATCCCGACGGCAGCATTGGC GGTGCTGAGATATATGGATACCCAAACTACCTTACCGGGGCGCCTTTGACACAGACATTATCACCGCTGGGGGGC CAGGGCTATGCTCCAACCATCAATACCAACCTTCCGATATCGCAGTCGTTCGAGACAAGCCTGGTCAATCAGCTC GAGCACTCTTCGACGGGAATGAGACGGATGCAGGGCGATGAAAACTTCTCCAATATGCTCAACTCCAATCACCCA GAATTGGACTTCTCTCTCTACCAGAATCACAGCCCCAACAGCGCTTCCACCCCCGAGTACGATTCTTCGTTATTG CTAGACCCGCAAATGCAACAGCATCAGTCTATCAACCAAGCGATAAACCCCGCTGATCTAGTCAGCCCCATCTCC AATCCTTCTGTATCCTCGCATCCATCACAAGATCAGCAACATTCCTCACCTGGCCCCATGTCCCCTCCAGGGTCC ACGCCGGGTGCATACTATACCCCTCGGCATTCACGACACACTTCGCTTGACCCGGCTACTGCGGCGTATTTGAGC GCCCAGTCAGGTCCAGACTGGCAGTCGGTTATGAATAATGTTTCCTTCCAAGGCCATCGACGTGCACCGTCCGAG GTGTCCGAAGTATCGTCGGCCAGCCACTCCCCTTATTTGTCTCAGCACGAATTCGATGGCATTGAGAACAATGCA TCGCCTTCTTTGATTCCCCAAAATGATCCAAATCTTTACGACAATGGCCTAGGCATGGAATCATTTACGTTATCG GAACAGCATCAGCAGGGGATCAGTCCTCTCCACAGCCCATATATCTCTCCGCGGTTGATGCCACAACAGGGGAAT GAGATGGTGCCGAATAATTCATATCTCACTCAGTTCCCCTCTGCGCCGACAGACATGTACGGAATGCCCCAAGAA GACATGATGAACATGGGCCAATTGAATAACATCCCGGGCGACATTGGTCAAGCTTCACAGATGGCTCCTCCATCG ATCAATGTTGAGTTTGCCCCGCCATCACGAGCTCCAAGCTTCGGCCCAGCCAAATCAACGGCAGACTTTGACTCA CTGAGCCCTCCGGCTATGCGATCCCGTGTTCGTAGCAAATCTGATCCTTATCACCCTGCTTCCCGCCCACGCTCT CCTGCAACTTCAGCAGCTTCTCTAGGGCCCCGCGCACCTGCCACCCCACGATCTTTGTCCCCTGTTGGATCGATT GGTTCGCGCAGTAGTCCCAGTTCGCGAGATCCCTCGCCCTCACGATCAAACCGACGCCTCTCCACCTCATCAATC GAGAACCGGAACTACATCCTAGATCTCGCCGATCCACAAAGGCCCGGAGCAGTACCCGGGGAGCCAAAAAGAATT CAGAAACACCCAGCTACCTTCCAGTGCACCCTATGTCCGAAACGGTTTACCCGCGCATACAACCTGCGATCCCAC CTCCGCACCCACACCGACGAACGACCATTTGTGTGCACAGTATGCGGCAAAGCATTCGCACGGCAGCACGACCGC AAACGCCACGAAGGCCTCCATTCCGGCGAAAAGAAATTCGTCTGCCGCGGCGAGCTCTCGCGAAGCGGACAATGG GGCTGCGGCCGCCGCTTCGCCCGTGCGGACGCTTTGGGCCGCCACTTCCGCTCCGAGGCGGGCCGGGTATGCATC AAGCCTCTTCTGGATGAGGAATCGCGAGAGCGTGACCGCGTCTTGCTAGAGCACCAGCAGCAACAGCAACAATCG CCATCCGGCCATCTCCAGCCAATCCCCCAGCCGCTCGTTATGCCCAACATGCCCGGCATGGATGGGCAATCGACG GGCAACTTTATTCTTCCTGCTGCTCTTCTGGCGCAATACCCGGCTTTGCAGACATTGCAGTGGGACCAGATTTCG GCTGTGGGTGATGATCCGAGTGATATTGGTGGGCGGAGTAGCTTTGATGCTAGCTCTGGTGGAGAATTTGGCTTT GACGAGGATGATTCGGGGATGGGCGGTTATGGTAATAACCAAGGGGGTATGTACGGTGTCGATAACTCTGGTCAG ATGCTGGGGGTCAATTCTGGGGACCCTGGGTACTCTGATCAGAAGTGGACTGGATGA
Gene	>Pro_DTO377G3_2\|g2894.t1 ATGACCTCCCATGACCAGAACCACGGCACGGCCTATTGTCCGGAGCATGACCAGAACCACGGCGCGGTCTATTGT TCGGAAGATATGAAGCATCGGAGCATAAGCCCTTCGCCGCACGGCCAACAATATCACGACCCCAACCCCGGTGGA TTAGGAGTTGACCCCTCCTCCATGGCCGCTTATTCCACAAACCTCTCCTATCAGAATCCCGACGGCAGCATTGGC GGTGCTGAGATATATGGATACCCAAACTACCTTACCGGGGCGCCTTTGACACAGACATTATCACCGCTGGGGGGC CAGGGCTATGCTCCAACCATCAATACCAACCTTCCGATATCGCAGTCGTTCGAGACAAGCCTGGTCAATCAGCTC GAGCACTCTTCGACGGGAATGAGACGGATGCAGGGCGATGAAAACTTCTCCAATATGCTCAACTCCAATCACCCA GAATTGGACTTCTCTCTCTACCAGAATCACAGCCCCAACAGCGCTTCCACCCCCGAGTACGATTCTTCGTTATTG CTAGACCCGCAAATGCAACAGCATCAGTCTATCAACCAAGCGATAAACCCCGCTGATCTAGTCAGCCCCATCTCC AATCCTTCTGTATCCTCGCATCCATCACAAGATCAGCAACATTCCTCACCTGGCCCCATGTCCCCTCCAGGGTCC ACGCCGGGTGCATACTATACCCCTCGGCATTCACGACACACTTCGCTTGACCCGGCTACTGCGGCGTATTTGAGC GCCCAGTCAGGTCCAGACTGGCAGTCGGTTATGAATAATGTTTCCTTCCAAGGCCATCGACGTGCACCGTCCGAG GTGTCCGAAGTATCGTCGGCCAGCCACTCCCCTTATTTGTCTCAGCACGAATTCGATGGCATTGAGAACAATGCA TCGCCTTCTTTGATTCCCCAAAATGATCCAAATCTTTACGACAATGGCCTAGGCATGGAATCATTTACGTTATCG GAACAGCATCAGCAGGGGATCAGTCCTCTCCACAGCCCATATATCTCTCCGCGGTTGATGCCACAACAGGGGAAT GAGATGGTGCCGAATAATTCATATCTCACTCAGTTCCCCTCTGCGCCGACAGACATGTACGGAATGCCCCAAGAA GACATGATGAACATGGGCCAATTGAATAACATCCCGGGCGACATTGGTCAAGCTTCACAGATGGCTCCTCCATCG ATCAATGTTGAGTTTGCCCCGCCATCACGAGCTCCAAGCTTCGGCCCAGCCAAATCAACGGCAGACTTTGACTCA CTGAGCCCTCCGGCTATGCGTAAGTGACGATTTACAACAGTTTGATTCGTACGATACTAAACAGAACTTAGGATC CCGTGTTCGTAGCAAATCTGATCCTTATCACCCTGCTTCCCGCCCACGCTCTCCTGCAACTTCAGCAGCTTCTCT AGGGCCCCGCGCACCTGCCACCCCACGATCTTTGTCCCCTGTTGGATCGATTGGTTCGCGCAGTAGTCCCAGTTC GCGAGATCCCTCGCCCTCACGATCAAACCGACGCCTCTCCACCTCATCAATCGAGAACCGGAACTACATCCTAGA TCTCGCCGATCCACAAAGGCCCGGAGCAGTACCCGGGGAGCCAAAAAGAATTCAGAAACACCCAGCTACCTTCCA GTGCACCCTATGTCCGAAACGGTTTACCCGCGCATACAACCTGCGATCCCACCTCCGCACCCACACCGACGAACG ACCATTTGTGTGCACAGTATGCGGCAAAGCATTCGCACGGCAGCACGACCGCAAACGCCACGAAGGCCTCCATTC CGGCGAAAAGAAATTCGTCTGCCGCGGCGAGCTCTCGCGAAGCGGACAATGGGGCTGCGGCCGCCGCTTCGCCCG TGCGGACGCTTTGGGCCGCCACTTCCGCTCCGAGGCGGGCCGGGTATGCATCAAGCCTCTTCTGGATGAGGAATC GCGAGAGCGTGACCGCGTCTTGCTAGAGCACCAGCAGCAACAGCAACAATCGCCATCCGGCCATCTCCAGCCAAT CCCCCAGCCGCTCGTTATGCCCAACATGCCCGGCATGGATGGGCAATCGACGGGCAACTTTATTCTTCCTGCTGC TCTTCTGGCGCAATACCCGGCTTTGCAGACATTGCAGTGGGACCAGATTTCGGCTGTGGGTGATGATCCGAGTGA TATTGGTGGGCGGAGTAGCTTTGATGCTAGCTCTGGTGGAGAATTTGGCTTTGACGAGGATGATTCGGGGATGGG CGGTTATGGTAATAACCAAGGGGGTATGTACGGTGTCGATAACTCTGGTCAGATGCTGGGGGTCAATTCTGGGGA CCCTGGGTACTCTGATCAGAAGTGGACTGGATGA

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