Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2894.t1
Gene name
Locationscaffold_04:160631..162990
Strand+
Gene length (bp)2359
Transcript length (bp)2307
Coding sequence length (bp)2307
Protein length (aa) 769

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00096 zf-C2H2 Zinc finger, C2H2 type 4.3E-06 532 554
PF00096 zf-C2H2 Zinc finger, C2H2 type 7.0E-03 560 582
PF13894 zf-C2H2_4 C2H2-type zinc finger 4.8E-04 532 554
PF13912 zf-C2H2_6 C2H2-type zinc finger 4.3E-04 532 556
PF12874 zf-met Zinc-finger of C2H2 type 2.5E-02 532 554

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 49 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
C2H2 zinc finger

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 27.40 16.17 38.63
5d_25C Five days - 25 degrees Celsius 23.47 13.58 33.36
7d_25C Seven days - 25 degrees Celsius 22.08 12.65 31.50
10d_25C Ten days - 25 degrees Celsius 18.05 9.95 26.16
7d_15C Seven days - 15 degrees Celsius 26.35 15.49 37.22
7d_30C Seven days - 30 degrees Celsius 22.72 12.99 32.44

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.579997 no
3d_25C 7d_25C 0.411873 no
3d_25C 7d_15C 0.911984 no
3d_25C 7d_30C 0.495185 no
3d_25C 10d_25C 0.078462 no
5d_25C 7d_25C 0.854926 no
5d_25C 7d_15C 0.695774 no
5d_25C 7d_30C 0.927469 no
5d_25C 10d_25C 0.316786 no
7d_25C 7d_15C 0.521994 no
7d_25C 7d_30C 0.937775 no
7d_25C 10d_25C 0.480026 no
7d_15C 7d_30C 0.606254 no
7d_15C 10d_25C 0.115508 no
7d_30C 10d_25C 0.404918 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2894.t1
MTSHDQNHGTAYCPEHDQNHGAVYCSEDMKHRSISPSPHGQQYHDPNPGGLGVDPSSMAAYSTNLSYQNPDGSIG
GAEIYGYPNYLTGAPLTQTLSPLGGQGYAPTINTNLPISQSFETSLVNQLEHSSTGMRRMQGDENFSNMLNSNHP
ELDFSLYQNHSPNSASTPEYDSSLLLDPQMQQHQSINQAINPADLVSPISNPSVSSHPSQDQQHSSPGPMSPPGS
TPGAYYTPRHSRHTSLDPATAAYLSAQSGPDWQSVMNNVSFQGHRRAPSEVSEVSSASHSPYLSQHEFDGIENNA
SPSLIPQNDPNLYDNGLGMESFTLSEQHQQGISPLHSPYISPRLMPQQGNEMVPNNSYLTQFPSAPTDMYGMPQE
DMMNMGQLNNIPGDIGQASQMAPPSINVEFAPPSRAPSFGPAKSTADFDSLSPPAMRSRVRSKSDPYHPASRPRS
PATSAASLGPRAPATPRSLSPVGSIGSRSSPSSRDPSPSRSNRRLSTSSIENRNYILDLADPQRPGAVPGEPKRI
QKHPATFQCTLCPKRFTRAYNLRSHLRTHTDERPFVCTVCGKAFARQHDRKRHEGLHSGEKKFVCRGELSRSGQW
GCGRRFARADALGRHFRSEAGRVCIKPLLDEESRERDRVLLEHQQQQQQSPSGHLQPIPQPLVMPNMPGMDGQST
GNFILPAALLAQYPALQTLQWDQISAVGDDPSDIGGRSSFDASSGGEFGFDEDDSGMGGYGNNQGGMYGVDNSGQ
MLGVNSGDPGYSDQKWTG*
Coding >Pro_DTO377G3_2|g2894.t1
ATGACCTCCCATGACCAGAACCACGGCACGGCCTATTGTCCGGAGCATGACCAGAACCACGGCGCGGTCTATTGT
TCGGAAGATATGAAGCATCGGAGCATAAGCCCTTCGCCGCACGGCCAACAATATCACGACCCCAACCCCGGTGGA
TTAGGAGTTGACCCCTCCTCCATGGCCGCTTATTCCACAAACCTCTCCTATCAGAATCCCGACGGCAGCATTGGC
GGTGCTGAGATATATGGATACCCAAACTACCTTACCGGGGCGCCTTTGACACAGACATTATCACCGCTGGGGGGC
CAGGGCTATGCTCCAACCATCAATACCAACCTTCCGATATCGCAGTCGTTCGAGACAAGCCTGGTCAATCAGCTC
GAGCACTCTTCGACGGGAATGAGACGGATGCAGGGCGATGAAAACTTCTCCAATATGCTCAACTCCAATCACCCA
GAATTGGACTTCTCTCTCTACCAGAATCACAGCCCCAACAGCGCTTCCACCCCCGAGTACGATTCTTCGTTATTG
CTAGACCCGCAAATGCAACAGCATCAGTCTATCAACCAAGCGATAAACCCCGCTGATCTAGTCAGCCCCATCTCC
AATCCTTCTGTATCCTCGCATCCATCACAAGATCAGCAACATTCCTCACCTGGCCCCATGTCCCCTCCAGGGTCC
ACGCCGGGTGCATACTATACCCCTCGGCATTCACGACACACTTCGCTTGACCCGGCTACTGCGGCGTATTTGAGC
GCCCAGTCAGGTCCAGACTGGCAGTCGGTTATGAATAATGTTTCCTTCCAAGGCCATCGACGTGCACCGTCCGAG
GTGTCCGAAGTATCGTCGGCCAGCCACTCCCCTTATTTGTCTCAGCACGAATTCGATGGCATTGAGAACAATGCA
TCGCCTTCTTTGATTCCCCAAAATGATCCAAATCTTTACGACAATGGCCTAGGCATGGAATCATTTACGTTATCG
GAACAGCATCAGCAGGGGATCAGTCCTCTCCACAGCCCATATATCTCTCCGCGGTTGATGCCACAACAGGGGAAT
GAGATGGTGCCGAATAATTCATATCTCACTCAGTTCCCCTCTGCGCCGACAGACATGTACGGAATGCCCCAAGAA
GACATGATGAACATGGGCCAATTGAATAACATCCCGGGCGACATTGGTCAAGCTTCACAGATGGCTCCTCCATCG
ATCAATGTTGAGTTTGCCCCGCCATCACGAGCTCCAAGCTTCGGCCCAGCCAAATCAACGGCAGACTTTGACTCA
CTGAGCCCTCCGGCTATGCGATCCCGTGTTCGTAGCAAATCTGATCCTTATCACCCTGCTTCCCGCCCACGCTCT
CCTGCAACTTCAGCAGCTTCTCTAGGGCCCCGCGCACCTGCCACCCCACGATCTTTGTCCCCTGTTGGATCGATT
GGTTCGCGCAGTAGTCCCAGTTCGCGAGATCCCTCGCCCTCACGATCAAACCGACGCCTCTCCACCTCATCAATC
GAGAACCGGAACTACATCCTAGATCTCGCCGATCCACAAAGGCCCGGAGCAGTACCCGGGGAGCCAAAAAGAATT
CAGAAACACCCAGCTACCTTCCAGTGCACCCTATGTCCGAAACGGTTTACCCGCGCATACAACCTGCGATCCCAC
CTCCGCACCCACACCGACGAACGACCATTTGTGTGCACAGTATGCGGCAAAGCATTCGCACGGCAGCACGACCGC
AAACGCCACGAAGGCCTCCATTCCGGCGAAAAGAAATTCGTCTGCCGCGGCGAGCTCTCGCGAAGCGGACAATGG
GGCTGCGGCCGCCGCTTCGCCCGTGCGGACGCTTTGGGCCGCCACTTCCGCTCCGAGGCGGGCCGGGTATGCATC
AAGCCTCTTCTGGATGAGGAATCGCGAGAGCGTGACCGCGTCTTGCTAGAGCACCAGCAGCAACAGCAACAATCG
CCATCCGGCCATCTCCAGCCAATCCCCCAGCCGCTCGTTATGCCCAACATGCCCGGCATGGATGGGCAATCGACG
GGCAACTTTATTCTTCCTGCTGCTCTTCTGGCGCAATACCCGGCTTTGCAGACATTGCAGTGGGACCAGATTTCG
GCTGTGGGTGATGATCCGAGTGATATTGGTGGGCGGAGTAGCTTTGATGCTAGCTCTGGTGGAGAATTTGGCTTT
GACGAGGATGATTCGGGGATGGGCGGTTATGGTAATAACCAAGGGGGTATGTACGGTGTCGATAACTCTGGTCAG
ATGCTGGGGGTCAATTCTGGGGACCCTGGGTACTCTGATCAGAAGTGGACTGGATGA
Transcript >Pro_DTO377G3_2|g2894.t1
ATGACCTCCCATGACCAGAACCACGGCACGGCCTATTGTCCGGAGCATGACCAGAACCACGGCGCGGTCTATTGT
TCGGAAGATATGAAGCATCGGAGCATAAGCCCTTCGCCGCACGGCCAACAATATCACGACCCCAACCCCGGTGGA
TTAGGAGTTGACCCCTCCTCCATGGCCGCTTATTCCACAAACCTCTCCTATCAGAATCCCGACGGCAGCATTGGC
GGTGCTGAGATATATGGATACCCAAACTACCTTACCGGGGCGCCTTTGACACAGACATTATCACCGCTGGGGGGC
CAGGGCTATGCTCCAACCATCAATACCAACCTTCCGATATCGCAGTCGTTCGAGACAAGCCTGGTCAATCAGCTC
GAGCACTCTTCGACGGGAATGAGACGGATGCAGGGCGATGAAAACTTCTCCAATATGCTCAACTCCAATCACCCA
GAATTGGACTTCTCTCTCTACCAGAATCACAGCCCCAACAGCGCTTCCACCCCCGAGTACGATTCTTCGTTATTG
CTAGACCCGCAAATGCAACAGCATCAGTCTATCAACCAAGCGATAAACCCCGCTGATCTAGTCAGCCCCATCTCC
AATCCTTCTGTATCCTCGCATCCATCACAAGATCAGCAACATTCCTCACCTGGCCCCATGTCCCCTCCAGGGTCC
ACGCCGGGTGCATACTATACCCCTCGGCATTCACGACACACTTCGCTTGACCCGGCTACTGCGGCGTATTTGAGC
GCCCAGTCAGGTCCAGACTGGCAGTCGGTTATGAATAATGTTTCCTTCCAAGGCCATCGACGTGCACCGTCCGAG
GTGTCCGAAGTATCGTCGGCCAGCCACTCCCCTTATTTGTCTCAGCACGAATTCGATGGCATTGAGAACAATGCA
TCGCCTTCTTTGATTCCCCAAAATGATCCAAATCTTTACGACAATGGCCTAGGCATGGAATCATTTACGTTATCG
GAACAGCATCAGCAGGGGATCAGTCCTCTCCACAGCCCATATATCTCTCCGCGGTTGATGCCACAACAGGGGAAT
GAGATGGTGCCGAATAATTCATATCTCACTCAGTTCCCCTCTGCGCCGACAGACATGTACGGAATGCCCCAAGAA
GACATGATGAACATGGGCCAATTGAATAACATCCCGGGCGACATTGGTCAAGCTTCACAGATGGCTCCTCCATCG
ATCAATGTTGAGTTTGCCCCGCCATCACGAGCTCCAAGCTTCGGCCCAGCCAAATCAACGGCAGACTTTGACTCA
CTGAGCCCTCCGGCTATGCGATCCCGTGTTCGTAGCAAATCTGATCCTTATCACCCTGCTTCCCGCCCACGCTCT
CCTGCAACTTCAGCAGCTTCTCTAGGGCCCCGCGCACCTGCCACCCCACGATCTTTGTCCCCTGTTGGATCGATT
GGTTCGCGCAGTAGTCCCAGTTCGCGAGATCCCTCGCCCTCACGATCAAACCGACGCCTCTCCACCTCATCAATC
GAGAACCGGAACTACATCCTAGATCTCGCCGATCCACAAAGGCCCGGAGCAGTACCCGGGGAGCCAAAAAGAATT
CAGAAACACCCAGCTACCTTCCAGTGCACCCTATGTCCGAAACGGTTTACCCGCGCATACAACCTGCGATCCCAC
CTCCGCACCCACACCGACGAACGACCATTTGTGTGCACAGTATGCGGCAAAGCATTCGCACGGCAGCACGACCGC
AAACGCCACGAAGGCCTCCATTCCGGCGAAAAGAAATTCGTCTGCCGCGGCGAGCTCTCGCGAAGCGGACAATGG
GGCTGCGGCCGCCGCTTCGCCCGTGCGGACGCTTTGGGCCGCCACTTCCGCTCCGAGGCGGGCCGGGTATGCATC
AAGCCTCTTCTGGATGAGGAATCGCGAGAGCGTGACCGCGTCTTGCTAGAGCACCAGCAGCAACAGCAACAATCG
CCATCCGGCCATCTCCAGCCAATCCCCCAGCCGCTCGTTATGCCCAACATGCCCGGCATGGATGGGCAATCGACG
GGCAACTTTATTCTTCCTGCTGCTCTTCTGGCGCAATACCCGGCTTTGCAGACATTGCAGTGGGACCAGATTTCG
GCTGTGGGTGATGATCCGAGTGATATTGGTGGGCGGAGTAGCTTTGATGCTAGCTCTGGTGGAGAATTTGGCTTT
GACGAGGATGATTCGGGGATGGGCGGTTATGGTAATAACCAAGGGGGTATGTACGGTGTCGATAACTCTGGTCAG
ATGCTGGGGGTCAATTCTGGGGACCCTGGGTACTCTGATCAGAAGTGGACTGGATGA
Gene >Pro_DTO377G3_2|g2894.t1
ATGACCTCCCATGACCAGAACCACGGCACGGCCTATTGTCCGGAGCATGACCAGAACCACGGCGCGGTCTATTGT
TCGGAAGATATGAAGCATCGGAGCATAAGCCCTTCGCCGCACGGCCAACAATATCACGACCCCAACCCCGGTGGA
TTAGGAGTTGACCCCTCCTCCATGGCCGCTTATTCCACAAACCTCTCCTATCAGAATCCCGACGGCAGCATTGGC
GGTGCTGAGATATATGGATACCCAAACTACCTTACCGGGGCGCCTTTGACACAGACATTATCACCGCTGGGGGGC
CAGGGCTATGCTCCAACCATCAATACCAACCTTCCGATATCGCAGTCGTTCGAGACAAGCCTGGTCAATCAGCTC
GAGCACTCTTCGACGGGAATGAGACGGATGCAGGGCGATGAAAACTTCTCCAATATGCTCAACTCCAATCACCCA
GAATTGGACTTCTCTCTCTACCAGAATCACAGCCCCAACAGCGCTTCCACCCCCGAGTACGATTCTTCGTTATTG
CTAGACCCGCAAATGCAACAGCATCAGTCTATCAACCAAGCGATAAACCCCGCTGATCTAGTCAGCCCCATCTCC
AATCCTTCTGTATCCTCGCATCCATCACAAGATCAGCAACATTCCTCACCTGGCCCCATGTCCCCTCCAGGGTCC
ACGCCGGGTGCATACTATACCCCTCGGCATTCACGACACACTTCGCTTGACCCGGCTACTGCGGCGTATTTGAGC
GCCCAGTCAGGTCCAGACTGGCAGTCGGTTATGAATAATGTTTCCTTCCAAGGCCATCGACGTGCACCGTCCGAG
GTGTCCGAAGTATCGTCGGCCAGCCACTCCCCTTATTTGTCTCAGCACGAATTCGATGGCATTGAGAACAATGCA
TCGCCTTCTTTGATTCCCCAAAATGATCCAAATCTTTACGACAATGGCCTAGGCATGGAATCATTTACGTTATCG
GAACAGCATCAGCAGGGGATCAGTCCTCTCCACAGCCCATATATCTCTCCGCGGTTGATGCCACAACAGGGGAAT
GAGATGGTGCCGAATAATTCATATCTCACTCAGTTCCCCTCTGCGCCGACAGACATGTACGGAATGCCCCAAGAA
GACATGATGAACATGGGCCAATTGAATAACATCCCGGGCGACATTGGTCAAGCTTCACAGATGGCTCCTCCATCG
ATCAATGTTGAGTTTGCCCCGCCATCACGAGCTCCAAGCTTCGGCCCAGCCAAATCAACGGCAGACTTTGACTCA
CTGAGCCCTCCGGCTATGCGTAAGTGACGATTTACAACAGTTTGATTCGTACGATACTAAACAGAACTTAGGATC
CCGTGTTCGTAGCAAATCTGATCCTTATCACCCTGCTTCCCGCCCACGCTCTCCTGCAACTTCAGCAGCTTCTCT
AGGGCCCCGCGCACCTGCCACCCCACGATCTTTGTCCCCTGTTGGATCGATTGGTTCGCGCAGTAGTCCCAGTTC
GCGAGATCCCTCGCCCTCACGATCAAACCGACGCCTCTCCACCTCATCAATCGAGAACCGGAACTACATCCTAGA
TCTCGCCGATCCACAAAGGCCCGGAGCAGTACCCGGGGAGCCAAAAAGAATTCAGAAACACCCAGCTACCTTCCA
GTGCACCCTATGTCCGAAACGGTTTACCCGCGCATACAACCTGCGATCCCACCTCCGCACCCACACCGACGAACG
ACCATTTGTGTGCACAGTATGCGGCAAAGCATTCGCACGGCAGCACGACCGCAAACGCCACGAAGGCCTCCATTC
CGGCGAAAAGAAATTCGTCTGCCGCGGCGAGCTCTCGCGAAGCGGACAATGGGGCTGCGGCCGCCGCTTCGCCCG
TGCGGACGCTTTGGGCCGCCACTTCCGCTCCGAGGCGGGCCGGGTATGCATCAAGCCTCTTCTGGATGAGGAATC
GCGAGAGCGTGACCGCGTCTTGCTAGAGCACCAGCAGCAACAGCAACAATCGCCATCCGGCCATCTCCAGCCAAT
CCCCCAGCCGCTCGTTATGCCCAACATGCCCGGCATGGATGGGCAATCGACGGGCAACTTTATTCTTCCTGCTGC
TCTTCTGGCGCAATACCCGGCTTTGCAGACATTGCAGTGGGACCAGATTTCGGCTGTGGGTGATGATCCGAGTGA
TATTGGTGGGCGGAGTAGCTTTGATGCTAGCTCTGGTGGAGAATTTGGCTTTGACGAGGATGATTCGGGGATGGG
CGGTTATGGTAATAACCAAGGGGGTATGTACGGTGTCGATAACTCTGGTCAGATGCTGGGGGTCAATTCTGGGGA
CCCTGGGTACTCTGATCAGAAGTGGACTGGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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