Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2894.t1
Gene name
Locationscaffold_04:160631..162990
Strand+
Gene length (bp)2359
Transcript length (bp)2307
Coding sequence length (bp)2307
Protein length (aa) 769

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00096 zf-C2H2 Zinc finger, C2H2 type 3.9E-06 532 554
PF00096 zf-C2H2 Zinc finger, C2H2 type 6.4E-03 560 582
PF13894 zf-C2H2_4 C2H2-type zinc finger 4.4E-04 532 554
PF13912 zf-C2H2_6 C2H2-type zinc finger 3.5E-04 532 556
PF12874 zf-met Zinc-finger of C2H2 type 1.4E-02 532 553

GO

GO Term Description Terminal node
GO:0003676 nucleic acid binding Yes
GO:0097159 organic cyclic compound binding No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 49 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
C2H2 zinc finger

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2894.t1
MTSHDQNHGTAYCPEHDQNHGAVYCSEDMKHRSISPSPHGQQYHDPNPGGLGVDPSSMAAYSTNLSYQNPDGSIG
GAEIYGYPNYLTGAPLTQTLSPLGGQGYAPTINTNLPISQSFETSLVNQLEHSSTGMRRMQGDENFSNMLNSNHP
ELDFSLYQNHSPNSASTPEYDSSLLLDPQMQQHQSINQAINPADLVSPISNPSVSSHPSQDQQHSSPGPMSPPGS
TPGAYYTPRHSRHTSLDPATAAYLSAQSGPDWQSVMNNVSFQGHRRAPSEVSEVSSASHSPYLSQHEFDGIENNA
SPSLIPQNDPNLYDNGLGMESFTLSEQHQQGISPLHSPYISPRLMPQQGNEMVPNNSYLTQFPSAPTDMYGMPQE
DMMNMGQLNNIPGDIGQASQMAPPSINVEFAPPSRAPSFGPAKSTADFDSLSPPAMRSRVRSKSDPYHPASRPRS
PATSAASLGPRAPATPRSLSPVGSIGSRSSPSSRDPSPSRSNRRLSTSSIENRNYILDLADPQRPGAVPGEPKRI
QKHPATFQCTLCPKRFTRAYNLRSHLRTHTDERPFVCTVCGKAFARQHDRKRHEGLHSGEKKFVCRGELSRSGQW
GCGRRFARADALGRHFRSEAGRVCIKPLLDEESRERDRVLLEHQQQQQQSPSGHLQPIPQPLVMPNMPGMDGQST
GNFILPAALLAQYPALQTLQWDQISAVGDDPSDIGGRSSFDASSGGEFGFDEDDSGMGGYGNNQGGMYGVDNSGQ
MLGVNSGDPGYSDQKWTG*
Coding >Pro_DTO377G3_2|g2894.t1
ATGACCTCCCATGACCAGAACCACGGCACGGCCTATTGTCCGGAGCATGACCAGAACCACGGCGCGGTCTATTGT
TCGGAAGATATGAAGCATCGGAGCATAAGCCCTTCGCCGCACGGCCAACAATATCACGACCCCAACCCCGGTGGA
TTAGGAGTTGACCCCTCCTCCATGGCCGCTTATTCCACAAACCTCTCCTATCAGAATCCCGACGGCAGCATTGGC
GGTGCTGAGATATATGGATACCCAAACTACCTTACCGGGGCGCCTTTGACACAGACATTATCACCGCTGGGGGGC
CAGGGCTATGCTCCAACCATCAATACCAACCTTCCGATATCGCAGTCGTTCGAGACAAGCCTGGTCAATCAGCTC
GAGCACTCTTCGACGGGAATGAGACGGATGCAGGGCGATGAAAACTTCTCCAATATGCTCAACTCCAATCACCCA
GAATTGGACTTCTCTCTCTACCAGAATCACAGCCCCAACAGCGCTTCCACCCCCGAGTACGATTCTTCGTTATTG
CTAGACCCGCAAATGCAACAGCATCAGTCTATCAACCAAGCGATAAACCCCGCTGATCTAGTCAGCCCCATCTCC
AATCCTTCTGTATCCTCGCATCCATCACAAGATCAGCAACATTCCTCACCTGGCCCCATGTCCCCTCCAGGGTCC
ACGCCGGGTGCATACTATACCCCTCGGCATTCACGACACACTTCGCTTGACCCGGCTACTGCGGCGTATTTGAGC
GCCCAGTCAGGTCCAGACTGGCAGTCGGTTATGAATAATGTTTCCTTCCAAGGCCATCGACGTGCACCGTCCGAG
GTGTCCGAAGTATCGTCGGCCAGCCACTCCCCTTATTTGTCTCAGCACGAATTCGATGGCATTGAGAACAATGCA
TCGCCTTCTTTGATTCCCCAAAATGATCCAAATCTTTACGACAATGGCCTAGGCATGGAATCATTTACGTTATCG
GAACAGCATCAGCAGGGGATCAGTCCTCTCCACAGCCCATATATCTCTCCGCGGTTGATGCCACAACAGGGGAAT
GAGATGGTGCCGAATAATTCATATCTCACTCAGTTCCCCTCTGCGCCGACAGACATGTACGGAATGCCCCAAGAA
GACATGATGAACATGGGCCAATTGAATAACATCCCGGGCGACATTGGTCAAGCTTCACAGATGGCTCCTCCATCG
ATCAATGTTGAGTTTGCCCCGCCATCACGAGCTCCAAGCTTCGGCCCAGCCAAATCAACGGCAGACTTTGACTCA
CTGAGCCCTCCGGCTATGCGATCCCGTGTTCGTAGCAAATCTGATCCTTATCACCCTGCTTCCCGCCCACGCTCT
CCTGCAACTTCAGCAGCTTCTCTAGGGCCCCGCGCACCTGCCACCCCACGATCTTTGTCCCCTGTTGGATCGATT
GGTTCGCGCAGTAGTCCCAGTTCGCGAGATCCCTCGCCCTCACGATCAAACCGACGCCTCTCCACCTCATCAATC
GAGAACCGGAACTACATCCTAGATCTCGCCGATCCACAAAGGCCCGGAGCAGTACCCGGGGAGCCAAAAAGAATT
CAGAAACACCCAGCTACCTTCCAGTGCACCCTATGTCCGAAACGGTTTACCCGCGCATACAACCTGCGATCCCAC
CTCCGCACCCACACCGACGAACGACCATTTGTGTGCACAGTATGCGGCAAAGCATTCGCACGGCAGCACGACCGC
AAACGCCACGAAGGCCTCCATTCCGGCGAAAAGAAATTCGTCTGCCGCGGCGAGCTCTCGCGAAGCGGACAATGG
GGCTGCGGCCGCCGCTTCGCCCGTGCGGACGCTTTGGGCCGCCACTTCCGCTCCGAGGCGGGCCGGGTATGCATC
AAGCCTCTTCTGGATGAGGAATCGCGAGAGCGTGACCGCGTCTTGCTAGAGCACCAGCAGCAACAGCAACAATCG
CCATCCGGCCATCTCCAGCCAATCCCCCAGCCGCTCGTTATGCCCAACATGCCCGGCATGGATGGGCAATCGACG
GGCAACTTTATTCTTCCTGCTGCTCTTCTGGCGCAATACCCGGCTTTGCAGACATTGCAGTGGGACCAGATTTCG
GCTGTGGGTGATGATCCGAGTGATATTGGTGGGCGGAGTAGCTTTGATGCTAGCTCTGGTGGAGAATTTGGCTTT
GACGAGGATGATTCGGGGATGGGCGGTTATGGTAATAACCAAGGGGGTATGTACGGTGTCGATAACTCTGGTCAG
ATGCTGGGGGTCAATTCTGGGGACCCTGGGTACTCTGATCAGAAGTGGACTGGATGA
Transcript >Pro_DTO377G3_2|g2894.t1
ATGACCTCCCATGACCAGAACCACGGCACGGCCTATTGTCCGGAGCATGACCAGAACCACGGCGCGGTCTATTGT
TCGGAAGATATGAAGCATCGGAGCATAAGCCCTTCGCCGCACGGCCAACAATATCACGACCCCAACCCCGGTGGA
TTAGGAGTTGACCCCTCCTCCATGGCCGCTTATTCCACAAACCTCTCCTATCAGAATCCCGACGGCAGCATTGGC
GGTGCTGAGATATATGGATACCCAAACTACCTTACCGGGGCGCCTTTGACACAGACATTATCACCGCTGGGGGGC
CAGGGCTATGCTCCAACCATCAATACCAACCTTCCGATATCGCAGTCGTTCGAGACAAGCCTGGTCAATCAGCTC
GAGCACTCTTCGACGGGAATGAGACGGATGCAGGGCGATGAAAACTTCTCCAATATGCTCAACTCCAATCACCCA
GAATTGGACTTCTCTCTCTACCAGAATCACAGCCCCAACAGCGCTTCCACCCCCGAGTACGATTCTTCGTTATTG
CTAGACCCGCAAATGCAACAGCATCAGTCTATCAACCAAGCGATAAACCCCGCTGATCTAGTCAGCCCCATCTCC
AATCCTTCTGTATCCTCGCATCCATCACAAGATCAGCAACATTCCTCACCTGGCCCCATGTCCCCTCCAGGGTCC
ACGCCGGGTGCATACTATACCCCTCGGCATTCACGACACACTTCGCTTGACCCGGCTACTGCGGCGTATTTGAGC
GCCCAGTCAGGTCCAGACTGGCAGTCGGTTATGAATAATGTTTCCTTCCAAGGCCATCGACGTGCACCGTCCGAG
GTGTCCGAAGTATCGTCGGCCAGCCACTCCCCTTATTTGTCTCAGCACGAATTCGATGGCATTGAGAACAATGCA
TCGCCTTCTTTGATTCCCCAAAATGATCCAAATCTTTACGACAATGGCCTAGGCATGGAATCATTTACGTTATCG
GAACAGCATCAGCAGGGGATCAGTCCTCTCCACAGCCCATATATCTCTCCGCGGTTGATGCCACAACAGGGGAAT
GAGATGGTGCCGAATAATTCATATCTCACTCAGTTCCCCTCTGCGCCGACAGACATGTACGGAATGCCCCAAGAA
GACATGATGAACATGGGCCAATTGAATAACATCCCGGGCGACATTGGTCAAGCTTCACAGATGGCTCCTCCATCG
ATCAATGTTGAGTTTGCCCCGCCATCACGAGCTCCAAGCTTCGGCCCAGCCAAATCAACGGCAGACTTTGACTCA
CTGAGCCCTCCGGCTATGCGATCCCGTGTTCGTAGCAAATCTGATCCTTATCACCCTGCTTCCCGCCCACGCTCT
CCTGCAACTTCAGCAGCTTCTCTAGGGCCCCGCGCACCTGCCACCCCACGATCTTTGTCCCCTGTTGGATCGATT
GGTTCGCGCAGTAGTCCCAGTTCGCGAGATCCCTCGCCCTCACGATCAAACCGACGCCTCTCCACCTCATCAATC
GAGAACCGGAACTACATCCTAGATCTCGCCGATCCACAAAGGCCCGGAGCAGTACCCGGGGAGCCAAAAAGAATT
CAGAAACACCCAGCTACCTTCCAGTGCACCCTATGTCCGAAACGGTTTACCCGCGCATACAACCTGCGATCCCAC
CTCCGCACCCACACCGACGAACGACCATTTGTGTGCACAGTATGCGGCAAAGCATTCGCACGGCAGCACGACCGC
AAACGCCACGAAGGCCTCCATTCCGGCGAAAAGAAATTCGTCTGCCGCGGCGAGCTCTCGCGAAGCGGACAATGG
GGCTGCGGCCGCCGCTTCGCCCGTGCGGACGCTTTGGGCCGCCACTTCCGCTCCGAGGCGGGCCGGGTATGCATC
AAGCCTCTTCTGGATGAGGAATCGCGAGAGCGTGACCGCGTCTTGCTAGAGCACCAGCAGCAACAGCAACAATCG
CCATCCGGCCATCTCCAGCCAATCCCCCAGCCGCTCGTTATGCCCAACATGCCCGGCATGGATGGGCAATCGACG
GGCAACTTTATTCTTCCTGCTGCTCTTCTGGCGCAATACCCGGCTTTGCAGACATTGCAGTGGGACCAGATTTCG
GCTGTGGGTGATGATCCGAGTGATATTGGTGGGCGGAGTAGCTTTGATGCTAGCTCTGGTGGAGAATTTGGCTTT
GACGAGGATGATTCGGGGATGGGCGGTTATGGTAATAACCAAGGGGGTATGTACGGTGTCGATAACTCTGGTCAG
ATGCTGGGGGTCAATTCTGGGGACCCTGGGTACTCTGATCAGAAGTGGACTGGATGA
Gene >Pro_DTO377G3_2|g2894.t1
ATGACCTCCCATGACCAGAACCACGGCACGGCCTATTGTCCGGAGCATGACCAGAACCACGGCGCGGTCTATTGT
TCGGAAGATATGAAGCATCGGAGCATAAGCCCTTCGCCGCACGGCCAACAATATCACGACCCCAACCCCGGTGGA
TTAGGAGTTGACCCCTCCTCCATGGCCGCTTATTCCACAAACCTCTCCTATCAGAATCCCGACGGCAGCATTGGC
GGTGCTGAGATATATGGATACCCAAACTACCTTACCGGGGCGCCTTTGACACAGACATTATCACCGCTGGGGGGC
CAGGGCTATGCTCCAACCATCAATACCAACCTTCCGATATCGCAGTCGTTCGAGACAAGCCTGGTCAATCAGCTC
GAGCACTCTTCGACGGGAATGAGACGGATGCAGGGCGATGAAAACTTCTCCAATATGCTCAACTCCAATCACCCA
GAATTGGACTTCTCTCTCTACCAGAATCACAGCCCCAACAGCGCTTCCACCCCCGAGTACGATTCTTCGTTATTG
CTAGACCCGCAAATGCAACAGCATCAGTCTATCAACCAAGCGATAAACCCCGCTGATCTAGTCAGCCCCATCTCC
AATCCTTCTGTATCCTCGCATCCATCACAAGATCAGCAACATTCCTCACCTGGCCCCATGTCCCCTCCAGGGTCC
ACGCCGGGTGCATACTATACCCCTCGGCATTCACGACACACTTCGCTTGACCCGGCTACTGCGGCGTATTTGAGC
GCCCAGTCAGGTCCAGACTGGCAGTCGGTTATGAATAATGTTTCCTTCCAAGGCCATCGACGTGCACCGTCCGAG
GTGTCCGAAGTATCGTCGGCCAGCCACTCCCCTTATTTGTCTCAGCACGAATTCGATGGCATTGAGAACAATGCA
TCGCCTTCTTTGATTCCCCAAAATGATCCAAATCTTTACGACAATGGCCTAGGCATGGAATCATTTACGTTATCG
GAACAGCATCAGCAGGGGATCAGTCCTCTCCACAGCCCATATATCTCTCCGCGGTTGATGCCACAACAGGGGAAT
GAGATGGTGCCGAATAATTCATATCTCACTCAGTTCCCCTCTGCGCCGACAGACATGTACGGAATGCCCCAAGAA
GACATGATGAACATGGGCCAATTGAATAACATCCCGGGCGACATTGGTCAAGCTTCACAGATGGCTCCTCCATCG
ATCAATGTTGAGTTTGCCCCGCCATCACGAGCTCCAAGCTTCGGCCCAGCCAAATCAACGGCAGACTTTGACTCA
CTGAGCCCTCCGGCTATGCGTAAGTGACGATTTACAACAGTTTGATTCGTACGATACTAAACAGAACTTAGGATC
CCGTGTTCGTAGCAAATCTGATCCTTATCACCCTGCTTCCCGCCCACGCTCTCCTGCAACTTCAGCAGCTTCTCT
AGGGCCCCGCGCACCTGCCACCCCACGATCTTTGTCCCCTGTTGGATCGATTGGTTCGCGCAGTAGTCCCAGTTC
GCGAGATCCCTCGCCCTCACGATCAAACCGACGCCTCTCCACCTCATCAATCGAGAACCGGAACTACATCCTAGA
TCTCGCCGATCCACAAAGGCCCGGAGCAGTACCCGGGGAGCCAAAAAGAATTCAGAAACACCCAGCTACCTTCCA
GTGCACCCTATGTCCGAAACGGTTTACCCGCGCATACAACCTGCGATCCCACCTCCGCACCCACACCGACGAACG
ACCATTTGTGTGCACAGTATGCGGCAAAGCATTCGCACGGCAGCACGACCGCAAACGCCACGAAGGCCTCCATTC
CGGCGAAAAGAAATTCGTCTGCCGCGGCGAGCTCTCGCGAAGCGGACAATGGGGCTGCGGCCGCCGCTTCGCCCG
TGCGGACGCTTTGGGCCGCCACTTCCGCTCCGAGGCGGGCCGGGTATGCATCAAGCCTCTTCTGGATGAGGAATC
GCGAGAGCGTGACCGCGTCTTGCTAGAGCACCAGCAGCAACAGCAACAATCGCCATCCGGCCATCTCCAGCCAAT
CCCCCAGCCGCTCGTTATGCCCAACATGCCCGGCATGGATGGGCAATCGACGGGCAACTTTATTCTTCCTGCTGC
TCTTCTGGCGCAATACCCGGCTTTGCAGACATTGCAGTGGGACCAGATTTCGGCTGTGGGTGATGATCCGAGTGA
TATTGGTGGGCGGAGTAGCTTTGATGCTAGCTCTGGTGGAGAATTTGGCTTTGACGAGGATGATTCGGGGATGGG
CGGTTATGGTAATAACCAAGGGGGTATGTACGGTGTCGATAACTCTGGTCAGATGCTGGGGGTCAATTCTGGGGA
CCCTGGGTACTCTGATCAGAAGTGGACTGGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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