Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2884.t1
Gene name
Locationscaffold_04:131959..132845
Strand-
Gene length (bp)886
Transcript length (bp)831
Coding sequence length (bp)831
Protein length (aa) 277

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08660 Alg14 Oligosaccharide biosynthesis protein Alg14 like 1.1E-55 56 273

GO

GO Term Description Terminal node
GO:0006488 dolichol-linked oligosaccharide biosynthetic process Yes
GO:0006629 lipid metabolic process No
GO:0008150 biological_process No
GO:0006490 oligosaccharide-lipid intermediate biosynthetic process No
GO:0044238 primary metabolic process No
GO:1901576 organic substance biosynthetic process No
GO:0009987 cellular process No
GO:0044255 cellular lipid metabolic process No
GO:0044237 cellular metabolic process No
GO:0008152 metabolic process No
GO:1901135 carbohydrate derivative metabolic process No
GO:0071704 organic substance metabolic process No
GO:1901137 carbohydrate derivative biosynthetic process No
GO:0009058 biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 12 34 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2884.t1
MSFSLASLSFGGLLLWCFVLAIALGASILLFLLISLTISQNIIPSKCRPRGSPTHLLVVLGSGGHTAEMLYMLER
MNFDPQIYTYRTYLVSSGDNFSADKAKDFEAQHVQNSQGHTHNKNYTIVTVPRARRVHQSYLTAPFSTLRCFWAC
LNVLRGLHPDQRLPNEYNSLYPDLILTNGPATAVCVVAGAKLIRFFLCLAKCAALCLGLRTVSSFALAPKLRTIY
IESWARVSSLSTSGVLLLPLADRFLVQWPAQAGRRAWWGMKRTQYAGWLVI*
Coding >Pro_DTO377G3_2|g2884.t1
ATGTCCTTCTCTCTTGCTTCTTTATCCTTCGGCGGCCTGCTCCTTTGGTGTTTTGTCCTGGCAATTGCACTTGGG
GCTAGCATTCTTCTCTTTCTACTCATCTCGCTCACGATTTCCCAGAATATCATTCCCTCCAAATGTCGCCCAAGA
GGATCTCCTACCCACCTGTTGGTTGTACTTGGAAGTGGTGGGCACACAGCTGAGATGCTCTACATGCTCGAGCGC
ATGAATTTCGACCCTCAAATCTACACGTATCGGACATACCTCGTGAGCTCCGGAGATAACTTCAGCGCAGACAAA
GCCAAGGATTTCGAGGCTCAACATGTACAAAATTCTCAGGGCCATACCCATAACAAGAACTACACTATTGTCACA
GTGCCCCGTGCCCGACGGGTCCATCAATCCTATCTCACCGCGCCATTCTCCACGCTTCGATGTTTCTGGGCTTGT
CTCAATGTTCTTCGGGGACTTCACCCGGATCAAAGGCTCCCAAATGAATACAACTCACTCTACCCTGATTTGATT
CTTACAAACGGTCCCGCTACAGCAGTCTGCGTTGTCGCAGGCGCAAAACTCATTCGTTTCTTTCTATGTTTGGCC
AAATGCGCTGCCTTGTGTCTGGGTCTGCGAACAGTCTCCTCGTTCGCATTGGCACCAAAGCTACGCACTATTTAC
ATCGAATCGTGGGCCCGTGTGAGCTCGCTTAGTACCTCTGGTGTCTTGCTGTTGCCTCTGGCCGACCGTTTTCTT
GTCCAATGGCCTGCCCAGGCCGGACGACGGGCCTGGTGGGGGATGAAGAGAACCCAATATGCAGGATGGCTTGTG
ATCTAA
Transcript >Pro_DTO377G3_2|g2884.t1
ATGTCCTTCTCTCTTGCTTCTTTATCCTTCGGCGGCCTGCTCCTTTGGTGTTTTGTCCTGGCAATTGCACTTGGG
GCTAGCATTCTTCTCTTTCTACTCATCTCGCTCACGATTTCCCAGAATATCATTCCCTCCAAATGTCGCCCAAGA
GGATCTCCTACCCACCTGTTGGTTGTACTTGGAAGTGGTGGGCACACAGCTGAGATGCTCTACATGCTCGAGCGC
ATGAATTTCGACCCTCAAATCTACACGTATCGGACATACCTCGTGAGCTCCGGAGATAACTTCAGCGCAGACAAA
GCCAAGGATTTCGAGGCTCAACATGTACAAAATTCTCAGGGCCATACCCATAACAAGAACTACACTATTGTCACA
GTGCCCCGTGCCCGACGGGTCCATCAATCCTATCTCACCGCGCCATTCTCCACGCTTCGATGTTTCTGGGCTTGT
CTCAATGTTCTTCGGGGACTTCACCCGGATCAAAGGCTCCCAAATGAATACAACTCACTCTACCCTGATTTGATT
CTTACAAACGGTCCCGCTACAGCAGTCTGCGTTGTCGCAGGCGCAAAACTCATTCGTTTCTTTCTATGTTTGGCC
AAATGCGCTGCCTTGTGTCTGGGTCTGCGAACAGTCTCCTCGTTCGCATTGGCACCAAAGCTACGCACTATTTAC
ATCGAATCGTGGGCCCGTGTGAGCTCGCTTAGTACCTCTGGTGTCTTGCTGTTGCCTCTGGCCGACCGTTTTCTT
GTCCAATGGCCTGCCCAGGCCGGACGACGGGCCTGGTGGGGGATGAAGAGAACCCAATATGCAGGATGGCTTGTG
ATCTAA
Gene >Pro_DTO377G3_2|g2884.t1
ATGTCCTTCTCTCTTGCTTCTTTATCCTTCGGCGGCCTGCTCCTTTGGTGTTTTGTCCTGGCAATTGCACTTGGG
GCTAGCATTCTTCTCGTGGGTATTATTTACTCGTACCATTGAATCAATCTAACTTGTCTATCTCTCCTAGTTTCT
ACTCATCTCGCTCACGATTTCCCAGAATATCATTCCCTCCAAATGTCGCCCAAGAGGATCTCCTACCCACCTGTT
GGTTGTACTTGGAAGTGGTGGGCACACAGCTGAGATGCTCTACATGCTCGAGCGCATGAATTTCGACCCTCAAAT
CTACACGTATCGGACATACCTCGTGAGCTCCGGAGATAACTTCAGCGCAGACAAAGCCAAGGATTTCGAGGCTCA
ACATGTACAAAATTCTCAGGGCCATACCCATAACAAGAACTACACTATTGTCACAGTGCCCCGTGCCCGACGGGT
CCATCAATCCTATCTCACCGCGCCATTCTCCACGCTTCGATGTTTCTGGGCTTGTCTCAATGTTCTTCGGGGACT
TCACCCGGATCAAAGGCTCCCAAATGAATACAACTCACTCTACCCTGATTTGATTCTTACAAACGGTCCCGCTAC
AGCAGTCTGCGTTGTCGCAGGCGCAAAACTCATTCGTTTCTTTCTATGTTTGGCCAAATGCGCTGCCTTGTGTCT
GGGTCTGCGAACAGTCTCCTCGTTCGCATTGGCACCAAAGCTACGCACTATTTACATCGAATCGTGGGCCCGTGT
GAGCTCGCTTAGTACCTCTGGTGTCTTGCTGTTGCCTCTGGCCGACCGTTTTCTTGTCCAATGGCCTGCCCAGGC
CGGACGACGGGCCTGGTGGGGGATGAAGAGAACCCAATATGCAGGATGGCTTGTGATCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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