Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2883.t1
Gene name
Locationscaffold_04:130128..131434
Strand-
Gene length (bp)1306
Transcript length (bp)756
Coding sequence length (bp)756
Protein length (aa) 252

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 1.1E-44 16 249
PF00106 adh_short short chain dehydrogenase 2.3E-40 9 204
PF08659 KR KR domain 1.8E-11 10 167

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2883.t1
MPYSLSGRNVLITGGSRGLGALSAEKFASEGSNVAINYMSSKETADKLASDIASKYGVKTVVIQGDAGVKDDCIN
AVKTTIEKLGGLDIIISNAGWTKMTNFGDLDAMDDEDWDKCWSVNVKSSLYLFKAALPTFNANPEGGVFLITASI
AGVMPSGSSLPYAVSKAASIHLMKCLAKSQGAKIRVNAILPGLLLTEWGQRFSPDQIEGWTNATTLKRAPEVEDC
ADMFVTLAKNASITGQAVQIDSGFGI*
Coding >Pro_DTO377G3_2|g2883.t1
ATGCCCTATTCCTTGTCGGGTCGCAATGTTTTGATCACCGGTGGCTCCCGAGGGCTAGGTGCTCTTTCGGCTGAG
AAGTTCGCCTCTGAGGGAAGCAACGTTGCTATCAACTATATGTCCAGCAAAGAGACTGCAGATAAGCTTGCCTCG
GACATTGCGAGCAAATATGGGGTAAAAACAGTGGTTATTCAAGGCGATGCCGGAGTCAAAGATGACTGTATCAAC
GCCGTCAAAACCACGATTGAGAAGCTCGGTGGCTTGGATATTATTATCTCAAATGCCGGATGGACAAAAATGACC
AATTTCGGCGATCTTGATGCCATGGACGACGAAGACTGGGACAAGTGCTGGTCGGTCAATGTAAAGAGCAGTCTT
TACCTGTTCAAGGCAGCTTTGCCCACGTTCAATGCGAACCCGGAAGGAGGTGTCTTCCTCATCACAGCCTCGATT
GCAGGCGTTATGCCAAGTGGCAGCAGCTTGCCTTATGCTGTCTCGAAAGCAGCATCTATCCATCTTATGAAGTGT
CTTGCTAAGAGCCAAGGCGCGAAAATTCGCGTCAATGCTATTCTCCCCGGCCTGTTACTCACCGAATGGGGTCAA
CGCTTCTCGCCCGATCAAATCGAAGGCTGGACAAATGCGACAACCCTCAAGCGAGCGCCCGAGGTAGAAGACTGC
GCGGACATGTTTGTTACATTGGCTAAGAATGCTTCTATAACTGGTCAAGCAGTTCAAATTGATTCCGGCTTTGGG
ATCTGA
Transcript >Pro_DTO377G3_2|g2883.t1
ATGCCCTATTCCTTGTCGGGTCGCAATGTTTTGATCACCGGTGGCTCCCGAGGGCTAGGTGCTCTTTCGGCTGAG
AAGTTCGCCTCTGAGGGAAGCAACGTTGCTATCAACTATATGTCCAGCAAAGAGACTGCAGATAAGCTTGCCTCG
GACATTGCGAGCAAATATGGGGTAAAAACAGTGGTTATTCAAGGCGATGCCGGAGTCAAAGATGACTGTATCAAC
GCCGTCAAAACCACGATTGAGAAGCTCGGTGGCTTGGATATTATTATCTCAAATGCCGGATGGACAAAAATGACC
AATTTCGGCGATCTTGATGCCATGGACGACGAAGACTGGGACAAGTGCTGGTCGGTCAATGTAAAGAGCAGTCTT
TACCTGTTCAAGGCAGCTTTGCCCACGTTCAATGCGAACCCGGAAGGAGGTGTCTTCCTCATCACAGCCTCGATT
GCAGGCGTTATGCCAAGTGGCAGCAGCTTGCCTTATGCTGTCTCGAAAGCAGCATCTATCCATCTTATGAAGTGT
CTTGCTAAGAGCCAAGGCGCGAAAATTCGCGTCAATGCTATTCTCCCCGGCCTGTTACTCACCGAATGGGGTCAA
CGCTTCTCGCCCGATCAAATCGAAGGCTGGACAAATGCGACAACCCTCAAGCGAGCGCCCGAGGTAGAAGACTGC
GCGGACATGTTTGTTACATTGGCTAAGAATGCTTCTATAACTGGTCAAGCAGTTCAAATTGATTCCGGCTTTGGG
ATCTGA
Gene >Pro_DTO377G3_2|g2883.t1
ATGCCCTATTCCTTGTCGGGTCGCAATGTTTTGATCACCGGTGGCTCCCGGTAGGAATCTTCAATTGAAACATGA
AAATATGCTCTGATCAATAAACTAATCTCGTTTTAACAGAGGGCTAGGTGCTCTTTCGGCTGAGAAGTTCGCCTC
TGAGGGAAGCAACGTTGCTATCAACTATATGTCCAGCAAAGAGACTGCAGATAAGCTTGCCTCGGACATTGCGAG
CAAATATGGGGTAAAAACAGTGGTTATTCAAGGCGTAAGGCACTCAAATCCAATGTAAATAGGCTGTTTCTCTAA
ATTTGACCCGCTGACATTATCTCGCATTTGAAAACAGGATGCCGGAGTCAAAGATGACTGTATCAACGCCGTCAA
AACCACGATTGAGAAGCTCGGTGGCTTGGATATTATTATCTCAAATGCCGTGAGTTATACAATCAATCCCTCTTA
TGGTACGAAATGCTAATACATGAGAAGGGATGGACAAAAATGACCAATTTCGGCGATCTTGATGCCATGGACGAC
GAAGACTGGGACAAGGTACCGAATGCATGCTCGGTAGTGGGAGCTTTAGTTTGACTGACTATTGAATCAGTGCTG
GTCGGTCAATGTAAAGAGCAGTCTTTACCTGTTCAAGGCAGCTTTGCCCACGTTCAATGCGAACCCGGAAGGAGG
TGTCTTCCTCATCACAGCCTCGATTGCAGTAAGCTACCAAAACTTGTCAAATTTCCTTGGACTGTCTACTGCTAT
AGAAACATCGAATGCTGATTTTCGGGTTCTTTCCAGGGCGTTATGCCAAGTGGCAGCAGCTTGCCTTATGCTGTC
TCGAAAGCAGCATGTATGCTATCATTCCAACAAACCACGCTGCTTGATTACTGACTCTGCATCGCCTAGCTATCC
ATCTTATGAAGTGTCTTGCTAAGAGCCAAGGCGCGAAAATTCGCGTCAATGCTATTCTCCCCGGCCTGTTACTCA
CCGAATGGGTAAGTAGCACATGCTCAATGCTAGGATCGATGAATACTGAGAACATCCCAGGGTCAACGCTTCTCG
CCCGATCAAATCGAAGGCTGGACAAATGCGACAACCCTCAAGCGAGCGGTAAGCAATTATAGTCTCGCCGACTTG
AAAGGACCATGTGTGCTAATGAATCGCTATAGCCCGAGGTAGAAGACTGCGCGGACATGTTTGTTACATTGGCTA
AGAATGCTTCTATAACTGGTCAAGCAGTTCAAATTGGTATGAGTCTCAAGTTCAGCGAGTAGAATCGAAACTGAC
AATCCTTCTAGATTCCGGCTTTGGGATCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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