© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g288.t1 |
| Gene name | |
| Location | scaffold_01:732332..734885 |
| Strand | - |
| Gene length (bp) | 2553 |
| Transcript length (bp) | 2226 |
| Coding sequence length (bp) | 2226 |
| Protein length (aa) | 742 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02516 | STT3 | Oligosaccharyl transferase STT3 subunit | 1.8E-139 | 22 | 498 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0006486 | protein glycosylation | Yes |
| GO:0004576 | oligosaccharyl transferase activity | Yes |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0043413 | macromolecule glycosylation | No |
| GO:0070085 | glycosylation | No |
| GO:0016758 | hexosyltransferase activity | No |
| GO:0019538 | protein metabolic process | No |
| GO:0016757 | glycosyltransferase activity | No |
| GO:0008150 | biological_process | No |
| GO:0036211 | protein modification process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0005575 | cellular_component | No |
| GO:0016740 | transferase activity | No |
| GO:0008152 | metabolic process | No |
| GO:0043412 | macromolecule modification | No |
| GO:0003674 | molecular_function | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0003824 | catalytic activity | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 42 | 22 |
| 2 | 90 | 112 | 22 |
| 3 | 119 | 138 | 19 |
| 4 | 148 | 168 | 20 |
| 5 | 175 | 192 | 17 |
| 6 | 212 | 234 | 22 |
| 7 | 241 | 263 | 22 |
| 8 | 273 | 295 | 22 |
| 9 | 308 | 330 | 22 |
| 10 | 362 | 384 | 22 |
| 11 | 391 | 413 | 22 |
| 12 | 418 | 437 | 19 |
| 13 | 465 | 487 | 22 |
| CAZyme category | E-value | Start | End |
|---|---|---|---|
| GT66 | 2.1E-195 | 23 | 662 |
| Orthofinder run ID | 2 |
| Orthogroup | 625 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g288.t1 MAPSSLDVVLKGSSGRNTRGLLRVIILCTIAAAAVSSRLFSVIRFESIIHEFDPWFNFRATKYLIENGFYSFWDW FDDRTWHPLGRVTGGTLYPGLMVTSGVIYHILRLLTIPVDIRNICVMLAPGFSGLTALAMYLLTSEMSDSPSAGL LAAAFMGITPGYISRSVAGSYDNEAIAIFLLVFTFYLWIKAVKNGSIMWGALTALFYGYMVSAWGGYVFITNLIP LHVFVLLCMGRYSTRVYISYTTWYALGTLGSMQIPFVGFLPIRNSDHMSALGVFGLIQLVAFAEFIRGYLPGKQF QKLLTSMVLLTFGLGFGGLVLLSISGVIAPWSGRFYSLWDTGYAKIHIPIIASVSEHQPTAWPAFFFDLNFLIWL FPAGVFMCFQKLKDEHVFVVIYSVLASYFAGVMVRLMLTLTPIVCVAAALALSCILDNFLVASTPSTETKAKATT DDKSLRSTRNPVVGIYSWFSKSVVVASVTLYLLLFVAHCTWVTSNAYSSPSVVLASKLPDGSQFIIDDYREAYYW LRQNTPDNAKIMSWWDYGYQIGGMADRPTLVDNNTWNNTHIATVGKAMSSREEVSYPILRQHDVDYVLVVFGGLL GYSGDDLNKFLWMVRIAEGIWPDEVKERDYFTARGEYRVDEEATPAMKNSLMYKMSYHNFQSLFPAGQAMDRVRN TKLPKESPQLNTLEEAFTSENWIVRLYKVKDLDNLGRDHSNAVAFDKGLKRKRATKHKGPRVLRTE* |
| Coding | >Pro_DTO377G3_2|g288.t1 ATGGCCCCGTCTTCGCTTGATGTTGTGTTGAAAGGCAGCTCCGGCCGCAATACGCGCGGTCTATTGCGGGTTATC ATTCTCTGTACCATTGCCGCCGCCGCGGTGTCCAGCCGCTTGTTCAGTGTCATTAGATTTGAAAGTATCATTCAC GAATTCGATCCGTGGTTCAACTTCCGTGCGACAAAATACTTGATCGAAAATGGCTTTTATAGCTTCTGGGATTGG TTTGATGACCGAACATGGCACCCTCTTGGGCGTGTCACTGGTGGCACATTGTACCCTGGCCTGATGGTGACCAGC GGCGTGATCTACCACATCCTTCGTCTCCTCACCATCCCCGTCGACATTCGAAACATCTGTGTCATGCTCGCCCCC GGATTCTCTGGACTAACAGCCCTGGCGATGTATCTCCTTACCTCTGAGATGTCCGACTCTCCTTCCGCAGGTCTT CTCGCCGCTGCTTTCATGGGAATTACACCCGGTTACATCTCACGGTCTGTGGCAGGCAGCTACGATAATGAAGCC ATTGCCATTTTCCTATTGGTGTTCACATTCTACCTCTGGATCAAGGCTGTGAAGAACGGCTCGATCATGTGGGGA GCCTTGACTGCATTGTTCTATGGATATATGGTTTCTGCTTGGGGTGGATACGTCTTCATTACTAACCTGATCCCT CTGCATGTCTTTGTTCTTCTGTGCATGGGACGATACAGCACCCGTGTCTACATCAGCTACACCACCTGGTACGCC CTGGGAACATTGGGAAGCATGCAGATCCCCTTTGTCGGTTTCCTGCCTATTCGCAACAGTGACCACATGTCTGCA CTTGGTGTCTTTGGGTTGATTCAATTGGTTGCGTTTGCTGAGTTCATCCGAGGCTACCTGCCCGGCAAGCAGTTC CAGAAGCTCCTCACTTCTATGGTCTTACTTACGTTTGGCCTTGGATTTGGTGGTCTTGTCCTGCTATCAATCTCA GGGGTAATTGCTCCCTGGAGTGGTCGCTTCTACTCTCTGTGGGATACCGGATATGCCAAGATTCATATCCCAATT ATTGCCTCCGTCTCCGAGCACCAGCCCACCGCCTGGCCTGCCTTCTTCTTTGACCTGAACTTCCTCATCTGGCTG TTCCCGGCCGGAGTGTTCATGTGCTTCCAGAAACTCAAGGATGAGCATGTCTTTGTGGTCATCTACTCCGTCCTT GCTAGTTACTTCGCTGGTGTTATGGTCCGTCTGATGCTCACCCTGACCCCCATTGTGTGTGTTGCGGCTGCTCTG GCCTTGTCATGCATCCTCGATAACTTCCTGGTTGCATCGACCCCTAGCACTGAAACCAAGGCTAAGGCAACTACG GATGATAAGTCACTTCGGTCAACCCGGAATCCTGTTGTCGGTATCTATTCCTGGTTTTCCAAGTCTGTCGTGGTA GCCTCGGTCACTCTTTACTTGCTTCTGTTCGTTGCACACTGCACCTGGGTTACTTCGAACGCATATTCCTCTCCC TCTGTGGTTCTGGCTAGCAAGCTTCCAGATGGAAGCCAATTCATCATCGATGACTACCGTGAGGCCTACTATTGG CTCCGCCAGAACACCCCGGACAATGCCAAGATCATGTCCTGGTGGGATTATGGATACCAAATCGGTGGTATGGCT GACCGCCCCACCCTGGTCGACAACAACACCTGGAACAACACCCATATTGCTACTGTTGGCAAGGCAATGAGCTCG CGCGAGGAAGTTAGCTACCCTATTCTCCGACAGCACGATGTCGACTACGTCTTGGTCGTGTTCGGTGGACTACTC GGCTACTCAGGTGACGATTTGAACAAGTTCCTCTGGATGGTTCGTATTGCCGAGGGTATCTGGCCAGACGAGGTG AAAGAGCGTGACTACTTCACCGCTCGTGGCGAGTACCGTGTCGACGAAGAAGCCACTCCCGCCATGAAGAACAGC CTGATGTACAAGATGTCTTATCACAACTTCCAGTCGCTCTTCCCGGCCGGTCAAGCCATGGACCGTGTCCGTAAC ACAAAACTTCCCAAGGAGAGCCCACAACTCAACACACTGGAAGAGGCATTCACCAGCGAGAACTGGATCGTTCGT CTATACAAGGTCAAGGACCTGGATAACCTCGGCCGTGATCATAGCAACGCAGTTGCCTTCGACAAGGGCCTCAAG CGCAAGCGTGCCACCAAGCACAAGGGCCCTCGTGTTCTGCGAACCGAGTAG |
| Transcript | >Pro_DTO377G3_2|g288.t1 ATGGCCCCGTCTTCGCTTGATGTTGTGTTGAAAGGCAGCTCCGGCCGCAATACGCGCGGTCTATTGCGGGTTATC ATTCTCTGTACCATTGCCGCCGCCGCGGTGTCCAGCCGCTTGTTCAGTGTCATTAGATTTGAAAGTATCATTCAC GAATTCGATCCGTGGTTCAACTTCCGTGCGACAAAATACTTGATCGAAAATGGCTTTTATAGCTTCTGGGATTGG TTTGATGACCGAACATGGCACCCTCTTGGGCGTGTCACTGGTGGCACATTGTACCCTGGCCTGATGGTGACCAGC GGCGTGATCTACCACATCCTTCGTCTCCTCACCATCCCCGTCGACATTCGAAACATCTGTGTCATGCTCGCCCCC GGATTCTCTGGACTAACAGCCCTGGCGATGTATCTCCTTACCTCTGAGATGTCCGACTCTCCTTCCGCAGGTCTT CTCGCCGCTGCTTTCATGGGAATTACACCCGGTTACATCTCACGGTCTGTGGCAGGCAGCTACGATAATGAAGCC ATTGCCATTTTCCTATTGGTGTTCACATTCTACCTCTGGATCAAGGCTGTGAAGAACGGCTCGATCATGTGGGGA GCCTTGACTGCATTGTTCTATGGATATATGGTTTCTGCTTGGGGTGGATACGTCTTCATTACTAACCTGATCCCT CTGCATGTCTTTGTTCTTCTGTGCATGGGACGATACAGCACCCGTGTCTACATCAGCTACACCACCTGGTACGCC CTGGGAACATTGGGAAGCATGCAGATCCCCTTTGTCGGTTTCCTGCCTATTCGCAACAGTGACCACATGTCTGCA CTTGGTGTCTTTGGGTTGATTCAATTGGTTGCGTTTGCTGAGTTCATCCGAGGCTACCTGCCCGGCAAGCAGTTC CAGAAGCTCCTCACTTCTATGGTCTTACTTACGTTTGGCCTTGGATTTGGTGGTCTTGTCCTGCTATCAATCTCA GGGGTAATTGCTCCCTGGAGTGGTCGCTTCTACTCTCTGTGGGATACCGGATATGCCAAGATTCATATCCCAATT ATTGCCTCCGTCTCCGAGCACCAGCCCACCGCCTGGCCTGCCTTCTTCTTTGACCTGAACTTCCTCATCTGGCTG TTCCCGGCCGGAGTGTTCATGTGCTTCCAGAAACTCAAGGATGAGCATGTCTTTGTGGTCATCTACTCCGTCCTT GCTAGTTACTTCGCTGGTGTTATGGTCCGTCTGATGCTCACCCTGACCCCCATTGTGTGTGTTGCGGCTGCTCTG GCCTTGTCATGCATCCTCGATAACTTCCTGGTTGCATCGACCCCTAGCACTGAAACCAAGGCTAAGGCAACTACG GATGATAAGTCACTTCGGTCAACCCGGAATCCTGTTGTCGGTATCTATTCCTGGTTTTCCAAGTCTGTCGTGGTA GCCTCGGTCACTCTTTACTTGCTTCTGTTCGTTGCACACTGCACCTGGGTTACTTCGAACGCATATTCCTCTCCC TCTGTGGTTCTGGCTAGCAAGCTTCCAGATGGAAGCCAATTCATCATCGATGACTACCGTGAGGCCTACTATTGG CTCCGCCAGAACACCCCGGACAATGCCAAGATCATGTCCTGGTGGGATTATGGATACCAAATCGGTGGTATGGCT GACCGCCCCACCCTGGTCGACAACAACACCTGGAACAACACCCATATTGCTACTGTTGGCAAGGCAATGAGCTCG CGCGAGGAAGTTAGCTACCCTATTCTCCGACAGCACGATGTCGACTACGTCTTGGTCGTGTTCGGTGGACTACTC GGCTACTCAGGTGACGATTTGAACAAGTTCCTCTGGATGGTTCGTATTGCCGAGGGTATCTGGCCAGACGAGGTG AAAGAGCGTGACTACTTCACCGCTCGTGGCGAGTACCGTGTCGACGAAGAAGCCACTCCCGCCATGAAGAACAGC CTGATGTACAAGATGTCTTATCACAACTTCCAGTCGCTCTTCCCGGCCGGTCAAGCCATGGACCGTGTCCGTAAC ACAAAACTTCCCAAGGAGAGCCCACAACTCAACACACTGGAAGAGGCATTCACCAGCGAGAACTGGATCGTTCGT CTATACAAGGTCAAGGACCTGGATAACCTCGGCCGTGATCATAGCAACGCAGTTGCCTTCGACAAGGGCCTCAAG CGCAAGCGTGCCACCAAGCACAAGGGCCCTCGTGTTCTGCGAACCGAGTAG |
| Gene | >Pro_DTO377G3_2|g288.t1 ATGGCCCCGTCTTCGCTTGATGTTGTGTTGAAAGGCAGCTCCGGCCGCAATACGCGCGGTCTATTGCGGGTTATC ATTCTCTGTACCATTGCCGCCGCCGCGGTGTCCAGCCGCTTGTTCAGTGTCATTAGTATGTCCCAATTGAGTTCC TTTATGATCAGTATGCTAACTATATTTTAGGATTTGAAAGTATCATTCACGAATGTATGATTTCCCTATGTTGCT GCACTGAATGCGGTGGCCACCTCGATAACCCCCGAAACAAACGAGATATTGATACCGTCTTACTCTAGTCGATCC GTGGTTCAACTTCCGTGCGACAAAATACTTGATCGAAAATGGCTTTTATAGCTTCTGGGATTGGTTTGATGACCG TAAGGCCCCTTCCCCGTGATTGCACGTCCTCCGCATGATACTATAAATGACATTGGGCTGATGGGAATGCTCGTG CTATAGGAACATGGCACCCTCTTGGGCGTGTCACTGGTGGCACATTGTACCCTGGCCTGATGGTGACCAGCGGCG TGATCTACCACATCCTTCGTCTCCTCACCATCCCCGTCGACATTCGAAACATCTGTGTCATGCTCGCCCCCGGAT TCTCTGGACTAACAGCCCTGGCGATGTATCTCCTTACCTCTGAGATGTCCGACTCTCCTTCCGCAGGTCTTCTCG CCGCTGCTTTCATGGGAATTACACCCGGTTACATCTCACGGTCTGTGGCAGGCAGCTACGATAATGAAGCCATTG CCATTTTCCTATTGGTGTTCACATTCTACCTCTGGATCAAGGCTGTGAAGAACGGCTCGATCATGTGGGGAGCCT TGACTGCATTGTTCTATGGATATATGGTTTCTGCTTGGGGTGGATACGTCTTCATTACTAACCTGATCCCTCTGC ATGTCTTTGTTCTTCTGTGCATGGGACGATACAGCACCCGTGTCTACATCAGCTACACCACCTGGTACGCCCTGG GAACATTGGGAAGCATGCAGATCCCCTTTGTCGGTTTCCTGCCTATTCGCAACAGTGACCACATGTCTGCACTTG GTAAGATTTTTTGGATTCTAAGCCATATCGTTGTCTCATTCTAACTATTTGATAGGTGTCTTTGGGTTGATTCAA TTGGTTGCGTTTGCTGAGTTCATCCGAGGCTACCTGCCCGGCAAGCAGTTCCAGAAGCTCCTCACTTCTATGGTC TTACTTACGTTTGGCCTTGGATTTGGTGGTCTTGTCCTGCTATCAATCTCAGGGGTAATTGCTCCCTGGAGTGGT CGCTTCTACTCTCTGTGGGATACCGGATATGCCAAGATTCATATCCCAATTATTGCCTCCGTCTCCGAGCACCAG CCCACCGCCTGGCCTGCCTTCTTCTTTGACCTGAACTTCCTCATCTGGCTGTTCCCGGCCGGAGTGTTCATGTGC TTCCAGAAACTCAAGGATGAGCATGTCTTTGTGGTCATCTACTCCGTCCTTGCTAGTTACTTCGCTGGTGTTATG GTCCGTCTGATGCTCACCCTGACCCCCATTGTGTGTGTTGCGGCTGCTCTGGCCTTGTCATGCATCCTCGATAAC TTCCTGGTTGCATCGACCCCTAGCACTGAAACCAAGGCTAAGGCAACTACGGATGATAAGTCACTTCGGTCAACC CGGAATCCTGTTGTCGGTATCTATTCCTGGTTTTCCAAGTCTGTCGTGGTAGCCTCGGTCACTCTTTACTTGCTT CTGTTCGTTGCACACTGCACCTGGGTTACTTCGAACGCATATTCCTCTCCCTCTGTGGTTCTGGCTAGCAAGCTT CCAGATGGAAGCCAATTCATCATCGATGACTACCGTGAGGCCTACTATTGGCTCCGCCAGAACACCCCGGACAAT GCCAAGATCATGTCCTGGTGGGATTATGGATACCAAATCGGTGGTATGGCTGACCGCCCCACCCTGGTCGACAAC AACACCTGGAACAACACCCATATTGCTACTGTTGGCAAGGCAATGAGCTCGCGCGAGGAAGTTAGCTACCCTATT CTCCGACAGCACGATGTCGACTACGTCTTGGTCGTGTTCGGTGGACTACTCGGCTACTCAGGTGACGATTTGAAC AAGTTCCTCTGGATGGTTCGTATTGCCGAGGGTATCTGGCCAGACGAGGTGAAAGAGCGTGACTACTTCACCGCT CGTGGCGAGTACCGTGTCGACGAAGAAGCCACTCCCGCCATGAAGAACAGCCTGATGTAAGAACCTCACATCTTA ATTATCCAAGTTACTGCTAACCCCATCAATAGGTACAAGATGTCTTATCACAACTTCCAGTCGCTCTTCCCGGCC GGTCAAGCCATGGACCGTGTCCGTAACACAAAACTTCCCAAGGAGAGCCCACAACTCAACACACTGGAAGAGGCA TTCACCAGCGAGAACTGGATCGTTCGTCTATACAAGGTCAAGGACCTGGATAACCTCGGCCGTGATCATAGCAAC GCAGTTGCCTTCGACAAGGGCCTCAAGCGCAAGCGTGCCACCAAGCACAAGGGCCCTCGTGTTCTGCGAACCGAG TAG |