Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2858.t1
Gene name
Locationscaffold_04:54598..55356
Strand+
Gene length (bp)758
Transcript length (bp)567
Coding sequence length (bp)567
Protein length (aa) 189

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05730 CFEM CFEM domain 4.2E-11 22 82

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2858.t1
MKFTITFALAALLSTAAAQGLGDLPDCSKTCATGSIPQSCGIDFKCICESKSFLDDVACCIADKCSKADQETTIK
VAKSICARGGVTDLPAEVVCSSSKSSSSSGASTSTSSSSSLTETGIKSSTETSSTTETSDSTTATNTNASTASSN
SASSVSAAATSTGVAALAHRDSSLVAAAGAAAAFAILI*
Coding >Pro_DTO377G3_2|g2858.t1
ATGAAATTCACCATCACTTTTGCCCTGGCAGCTCTATTGAGCACTGCCGCTGCTCAAGGCCTGGGCGATCTGCCC
GACTGCTCGAAAACCTGTGCTACGGGTTCAATTCCCCAGAGCTGCGGCATTGATTTCAAGTGCATCTGCGAGTCC
AAGTCCTTCCTGGACGATGTCGCCTGCTGCATCGCCGATAAATGCTCCAAGGCTGACCAAGAAACAACCATCAAG
GTCGCCAAGTCAATCTGTGCCCGCGGTGGTGTGACCGACCTGCCCGCCGAGGTGGTCTGCTCGAGCAGTAAATCC
AGTTCCAGCTCTGGCGCCAGTACCAGTACCAGCTCCAGCTCCAGCTTGACCGAGACTGGAATCAAGTCTAGCACT
GAGACCTCGAGTACGACGGAAACTTCGGATTCGACTACTGCGACCAATACGAACGCTTCTACCGCTTCCTCGAAC
AGTGCCTCGTCCGTCTCTGCTGCGGCGACTAGCACTGGTGTCGCTGCTCTTGCCCACAGGGATTCTTCGCTCGTG
GCCGCTGCTGGTGCTGCGGCGGCGTTCGCCATTCTGATCTAG
Transcript >Pro_DTO377G3_2|g2858.t1
ATGAAATTCACCATCACTTTTGCCCTGGCAGCTCTATTGAGCACTGCCGCTGCTCAAGGCCTGGGCGATCTGCCC
GACTGCTCGAAAACCTGTGCTACGGGTTCAATTCCCCAGAGCTGCGGCATTGATTTCAAGTGCATCTGCGAGTCC
AAGTCCTTCCTGGACGATGTCGCCTGCTGCATCGCCGATAAATGCTCCAAGGCTGACCAAGAAACAACCATCAAG
GTCGCCAAGTCAATCTGTGCCCGCGGTGGTGTGACCGACCTGCCCGCCGAGGTGGTCTGCTCGAGCAGTAAATCC
AGTTCCAGCTCTGGCGCCAGTACCAGTACCAGCTCCAGCTCCAGCTTGACCGAGACTGGAATCAAGTCTAGCACT
GAGACCTCGAGTACGACGGAAACTTCGGATTCGACTACTGCGACCAATACGAACGCTTCTACCGCTTCCTCGAAC
AGTGCCTCGTCCGTCTCTGCTGCGGCGACTAGCACTGGTGTCGCTGCTCTTGCCCACAGGGATTCTTCGCTCGTG
GCCGCTGCTGGTGCTGCGGCGGCGTTCGCCATTCTGATCTAG
Gene >Pro_DTO377G3_2|g2858.t1
ATGAAATTCACCATCACTTTTGCCCTGGCAGCTCTATTGAGCACTGCCGCTGCTCAAGGCCTGGGCGATCTGCCC
GACTGCTCGGTATGTGTTTACAGTCAGACATACAACTATGCCAAATGTGCCACCTGCTAAAGAAGCCATTGCATA
GAAAACCTGTGCTACGGGTTCAATTCCCCAGAGCTGCGGCATTGATTTCAAGTGCATCTGCGAGTCCAAGTCCTT
CCTGGACGATGTCGCCTGCTGCATCGCCGATAAATGCTCCAAGGCTGACCAAGAAAGTATGTTCTCTTCCTTTTC
CTCCATGCCCAATTGAGTACGCAAGTGCGGGATTATTCCAAAATGACTACGCATAATGGATGGCGGAACATGTAC
ATTGGGCTGATATGTTACACTTCACCACAGCAACCATCAAGGTCGCCAAGTCAATCTGTGCCCGCGGTGGTGTGA
CCGACCTGCCCGCCGAGGTGGTCTGCTCGAGCAGTAAATCCAGTTCCAGCTCTGGCGCCAGTACCAGTACCAGCT
CCAGCTCCAGCTTGACCGAGACTGGAATCAAGTCTAGCACTGAGACCTCGAGTACGACGGAAACTTCGGATTCGA
CTACTGCGACCAATACGAACGCTTCTACCGCTTCCTCGAACAGTGCCTCGTCCGTCTCTGCTGCGGCGACTAGCA
CTGGTGTCGCTGCTCTTGCCCACAGGGATTCTTCGCTCGTGGCCGCTGCTGGTGCTGCGGCGGCGTTCGCCATTC
TGATCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail