© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g2847.t1 |
| Gene name | |
| Location | scaffold_04:29135..30105 |
| Strand | + |
| Gene length (bp) | 970 |
| Transcript length (bp) | 786 |
| Coding sequence length (bp) | 786 |
| Protein length (aa) | 262 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10277 | Frag1 | Frag1/DRAM/Sfk1 family | 6.0E-41 | 1 | 207 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 44 | 61 | 17 |
| 2 | 82 | 104 | 22 |
| 3 | 114 | 136 | 22 |
| 4 | 149 | 171 | 22 |
| 5 | 186 | 208 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g2847.t1 MWVAMLIAMLVTWVRDGRPHYASMEAGQTIAYISDVGAQGLKPLFIAGSVVTVVFLDLAFLSERWLRHSNQLASN KGRLDKACAIASIFFAIAGAAGLILLSIFDTLRHPKQHDGFIALFIAGYVISAILVCIEYLRIGIFYRREHRILL VSFFIKLVFVIFELSLAIAFGVCIGSKKSSKQNPGAVIEWTIAFVFTGYVISFVVDLLPSVRTRNHVPQGEKYLM NQGGFGGTREEAVSIEEPLTHDSMGPSTGFYRGQRV* |
| Coding | >Pro_DTO377G3_2|g2847.t1 ATGTGGGTTGCAATGTTGATCGCCATGCTGGTCACCTGGGTCAGAGACGGCAGACCGCACTATGCCAGTATGGAA GCGGGACAGACTATTGCGTACATTTCAGATGTTGGAGCACAAGGCTTGAAACCGCTGTTCATCGCAGGCAGCGTG GTTACCGTCGTGTTTCTCGATTTGGCATTCCTCTCCGAGCGGTGGCTTCGACACTCCAACCAGTTGGCCTCGAAC AAGGGCAGGTTGGACAAGGCATGCGCTATTGCATCAATCTTTTTCGCGATCGCCGGTGCTGCTGGTCTGATCCTG CTCTCTATCTTTGATACCCTCCGCCACCCGAAACAGCACGACGGTTTCATCGCCCTGTTCATTGCTGGATACGTG ATTAGTGCCATCTTGGTTTGCATCGAGTACCTTCGCATTGGAATCTTCTACCGTCGCGAGCACCGTATTCTGCTA GTCAGTTTCTTTATCAAGCTTGTCTTCGTCATCTTCGAGCTCTCCCTCGCCATCGCCTTCGGTGTCTGCATCGGC AGCAAAAAGTCGTCCAAGCAAAACCCCGGCGCGGTTATCGAGTGGACCATTGCTTTCGTCTTCACTGGCTACGTT ATCTCCTTCGTTGTCGATCTATTGCCTTCAGTGCGCACACGCAACCACGTGCCTCAGGGTGAGAAGTACCTGATG AACCAGGGCGGATTCGGCGGAACCCGCGAAGAGGCTGTCTCTATCGAAGAACCCCTGACTCATGACTCGATGGGC CCAAGCACCGGCTTTTACCGCGGTCAGCGGGTCTAA |
| Transcript | >Pro_DTO377G3_2|g2847.t1 ATGTGGGTTGCAATGTTGATCGCCATGCTGGTCACCTGGGTCAGAGACGGCAGACCGCACTATGCCAGTATGGAA GCGGGACAGACTATTGCGTACATTTCAGATGTTGGAGCACAAGGCTTGAAACCGCTGTTCATCGCAGGCAGCGTG GTTACCGTCGTGTTTCTCGATTTGGCATTCCTCTCCGAGCGGTGGCTTCGACACTCCAACCAGTTGGCCTCGAAC AAGGGCAGGTTGGACAAGGCATGCGCTATTGCATCAATCTTTTTCGCGATCGCCGGTGCTGCTGGTCTGATCCTG CTCTCTATCTTTGATACCCTCCGCCACCCGAAACAGCACGACGGTTTCATCGCCCTGTTCATTGCTGGATACGTG ATTAGTGCCATCTTGGTTTGCATCGAGTACCTTCGCATTGGAATCTTCTACCGTCGCGAGCACCGTATTCTGCTA GTCAGTTTCTTTATCAAGCTTGTCTTCGTCATCTTCGAGCTCTCCCTCGCCATCGCCTTCGGTGTCTGCATCGGC AGCAAAAAGTCGTCCAAGCAAAACCCCGGCGCGGTTATCGAGTGGACCATTGCTTTCGTCTTCACTGGCTACGTT ATCTCCTTCGTTGTCGATCTATTGCCTTCAGTGCGCACACGCAACCACGTGCCTCAGGGTGAGAAGTACCTGATG AACCAGGGCGGATTCGGCGGAACCCGCGAAGAGGCTGTCTCTATCGAAGAACCCCTGACTCATGACTCGATGGGC CCAAGCACCGGCTTTTACCGCGGTCAGCGGGTCTAA |
| Gene | >Pro_DTO377G3_2|g2847.t1 ATGTGGGTTGGTAAGGCATCCCTGCATGGAAATGGAACAGGATATCTTGTTCTGGGCTGCAGCTAACACGGTCCT AGCAATGTTGATCGCCATGCTGGTCACCTGGGTCAGAGACGGCAGACCGCACTATGCCAGTATGGAAGCGGGACA GACTATTGCGTATGTTTCCTCTCCGCTATTAGCCCATGCATGCGCTAATAGGTTTTCCTACAGGTACATTTCAGA TGTTGGAGCACAAGGCTTGAAACCGCTGTTCATCGCAGGCAGCGTGGTTACCGTCGTGTTTCTCGATTTGGCATT CCTCTCCGAGCGGTGGCTTCGACACTCCAACCAGTTGGCCTCGAACAAGGGCAGGTTGGACAAGGCATGCGCTAT TGCATCAATCTTTTTCGCGATCGCCGGTGCTGCTGGTCTGATCCTGCTCTCTATCTTTGATACCCTCCGCCACCC GAAACAGCACGACGGTTTCATCGCCCTGTTCATGTGAGTCTTGTGTACTCGACTATGTATAGTCAATTGTGAACT AATCAATGAATTTCTCTCCAGTGCTGGATACGTGATTAGTGCCATCTTGGTTTGCATCGAGTACCTTCGCATTGG AATCTTCTACCGTCGCGAGCACCGTATTCTGCTAGTCAGTTTCTTTATCAAGCTTGTCTTCGTCATCTTCGAGCT CTCCCTCGCCATCGCCTTCGGTGTCTGCATCGGCAGCAAAAAGTCGTCCAAGCAAAACCCCGGCGCGGTTATCGA GTGGACCATTGCTTTCGTCTTCACTGGCTACGTTATCTCCTTCGTTGTCGATCTATTGCCTTCAGTGCGCACACG CAACCACGTGCCTCAGGGTGAGAAGTACCTGATGAACCAGGGCGGATTCGGCGGAACCCGCGAAGAGGCTGTCTC TATCGAAGAACCCCTGACTCATGACTCGATGGGCCCAAGCACCGGCTTTTACCGCGGTCAGCGGGTCTAA |