© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g2841.t1 |
| Gene name | |
| Location | scaffold_04:20096..21128 |
| Strand | - |
| Gene length (bp) | 1032 |
| Transcript length (bp) | 807 |
| Coding sequence length (bp) | 807 |
| Protein length (aa) | 269 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03332 | PMM | Eukaryotic phosphomannomutase | 1.6E-100 | 40 | 267 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004615 | phosphomannomutase activity | Yes |
| GO:0009298 | GDP-mannose biosynthetic process | Yes |
| GO:0008150 | biological_process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0055086 | nucleobase-containing small molecule metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0019438 | aromatic compound biosynthetic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0034654 | nucleobase-containing compound biosynthetic process | No |
| GO:0009225 | nucleotide-sugar metabolic process | No |
| GO:0009226 | nucleotide-sugar biosynthetic process | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0044271 | cellular nitrogen compound biosynthetic process | No |
| GO:0019673 | GDP-mannose metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0009058 | biosynthetic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:1901362 | organic cyclic compound biosynthetic process | No |
| GO:0044281 | small molecule metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0016866 | intramolecular transferase activity | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0018130 | heterocycle biosynthetic process | No |
| GO:0016853 | isomerase activity | No |
| GO:1901137 | carbohydrate derivative biosynthetic process | No |
| GO:0016868 | intramolecular transferase activity, phosphotransferases | No |
| GO:1901135 | carbohydrate derivative metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 47 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g2841.t1 MTEATSVYPSLEDRPMKNTIVLFDVDETLTPARRHASPEMLELLSRLRHKCAIGYVGGSNLVKQQEQLGSATMDV TTMFDFCFSENGLTAFRLGKPLATNNFIQWLGEDKYQTLVDFILKFIANTKLPRKRGTFVEFRNGMVNVSPVGRA ASTDERAEFEAFDKIHNIRKTLVEALRKEFPDYGLTYSIGGQISFDVFPTGWDKTYCLQHVEAEKGISGVDYKTI HFFGDKTCVGGNDYEIYEDPRTIGHAVTGPDDTIKQMKKLFDL* |
| Coding | >Pro_DTO377G3_2|g2841.t1 ATGACTGAAGCTACCAGTGTTTACCCCTCGTTGGAGGACCGTCCCATGAAGAACACGATTGTTCTGTTCGATGTT GACGAGACTCTCACCCCCGCAAGACGGCATGCCTCGCCAGAGATGCTCGAGTTGCTCTCTCGGTTGCGCCACAAA TGCGCCATTGGATACGTTGGCGGCTCGAACCTTGTGAAGCAGCAAGAACAACTTGGATCAGCCACCATGGATGTC ACCACCATGTTCGATTTCTGCTTCTCCGAAAACGGCCTGACCGCATTCCGCCTCGGCAAGCCGCTTGCTACCAAC AACTTCATCCAGTGGCTTGGGGAGGACAAGTACCAAACACTGGTGGATTTCATTCTTAAATTTATTGCCAACACC AAGTTGCCTCGCAAGCGCGGTACTTTCGTTGAGTTCCGTAATGGAATGGTTAATGTTAGCCCTGTTGGACGTGCT GCTAGCACCGACGAGCGTGCTGAGTTCGAAGCTTTCGACAAGATTCACAACATCAGAAAGACCCTAGTGGAGGCC TTGAGGAAGGAGTTCCCCGACTACGGTCTCACCTACTCTATCGGCGGTCAGATCTCTTTCGATGTCTTCCCTACC GGTTGGGATAAGACCTACTGCCTACAGCACGTCGAAGCTGAAAAGGGCATCTCGGGTGTCGACTACAAGACCATC CACTTCTTCGGCGACAAGACTTGCGTCGGAGGAAACGATTATGAGATCTACGAGGACCCTCGCACCATTGGGCAT GCCGTTACTGGTCCTGACGACACCATCAAGCAGATGAAGAAGCTGTTTGACTTATAG |
| Transcript | >Pro_DTO377G3_2|g2841.t1 ATGACTGAAGCTACCAGTGTTTACCCCTCGTTGGAGGACCGTCCCATGAAGAACACGATTGTTCTGTTCGATGTT GACGAGACTCTCACCCCCGCAAGACGGCATGCCTCGCCAGAGATGCTCGAGTTGCTCTCTCGGTTGCGCCACAAA TGCGCCATTGGATACGTTGGCGGCTCGAACCTTGTGAAGCAGCAAGAACAACTTGGATCAGCCACCATGGATGTC ACCACCATGTTCGATTTCTGCTTCTCCGAAAACGGCCTGACCGCATTCCGCCTCGGCAAGCCGCTTGCTACCAAC AACTTCATCCAGTGGCTTGGGGAGGACAAGTACCAAACACTGGTGGATTTCATTCTTAAATTTATTGCCAACACC AAGTTGCCTCGCAAGCGCGGTACTTTCGTTGAGTTCCGTAATGGAATGGTTAATGTTAGCCCTGTTGGACGTGCT GCTAGCACCGACGAGCGTGCTGAGTTCGAAGCTTTCGACAAGATTCACAACATCAGAAAGACCCTAGTGGAGGCC TTGAGGAAGGAGTTCCCCGACTACGGTCTCACCTACTCTATCGGCGGTCAGATCTCTTTCGATGTCTTCCCTACC GGTTGGGATAAGACCTACTGCCTACAGCACGTCGAAGCTGAAAAGGGCATCTCGGGTGTCGACTACAAGACCATC CACTTCTTCGGCGACAAGACTTGCGTCGGAGGAAACGATTATGAGATCTACGAGGACCCTCGCACCATTGGGCAT GCCGTTACTGGTCCTGACGACACCATCAAGCAGATGAAGAAGCTGTTTGACTTATAG |
| Gene | >Pro_DTO377G3_2|g2841.t1 ATGACTGAAGCTACCAGTGTTTACCCCTCGTTGGAGGACCGTCCCATGAAGAACACGATTGTTCTGTTCGATGTT GACGAGACTCTCACCCCCGCAAGACGGGTACGTTGCACTGAGACTCCTTGTTGTTCAATTATACTAACGAATTCT ATTACAGCATGCCTCGCCAGAGATGCTCGAGTTGCTCTCTCGGTTGCGCCACAAATGCGCCATTGGATACGTTCG TCTCCTCCCAATCAATACCCCCACCCCGTTCCTAACATGATGTAGGTTGGCGGCTCGAACCTTGTGAAGCAGCAA GAACAACTTGGATCAGCCACCATGGATGTCACCACCATGTTCGATTTCTGCTTCTCCGAAAACGGCCTGACCGCA TTCCGCCTCGGCAAGCCGCTTGCTACCAACAACTTCATCCAGTGGCTTGGGGAGGACAAGTACCAAACACTGGTG GATTTCATTCTTAAATTTATTGCCAACACCAAGTTGCCTCGCAAGCGCGGTACTTTCGTTGAGTTCCGTAATGGA ATGGTTAATGTTAGCCCTGTTGGACGTGCTGCTAGCACCGACGAGCGTGCTGAGTTCGAAGCGTACGGGCTGATC TTCTATATGTCCACATAAATGGACTGCCTGACTGACCTATGCTATAGTTTCGACAAGATTCACAACATCAGAAAG ACCCTAGTGGAGGCCTTGAGGAAGGAGTTCCCCGACTACGGTCTCACGTAAGTCTTTGTCCGGCAAGGTTTACTT TTAATATGGTACTAATCAATCTACTAATATAGCTACTCTATCGGCGGTCAGATCTCTTTCGATGTCTTCCCTACC GGTTGGGATAAGACCTACTGCCTACAGCACGTCGAAGCTGAAAAGGGCATCTCGGGTGTCGACTACAAGACCATC CACTTCTTCGGCGACAAGACTTGCGTCGGAGGAAACGATTATGAGATCTACGAGGACCCTCGCACCATTGGGCAT GCCGTTACTGGTCCTGACGACACCATCAAGCAGATGAAGAAGCTGTTTGACTTATAG |