Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2839.t1
Gene name
Locationscaffold_04:16612..17311
Strand+
Gene length (bp)699
Transcript length (bp)699
Coding sequence length (bp)699
Protein length (aa) 233

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 1.6E-21 7 192
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 7.8E-21 12 192

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2839.t1
MSASRPTILIIGISRGLGHAMAVEFLEKGWNVVGTVRGESRKLLHELEDKYNGLIDIETLDICQPDQIQALDKCL
SGKIFDILFVNAGTTNRDQTQKIGDVSTEEFVHVMVTNALSPMRVVERLAHHVAPKGLIGVMSSGQGSISNNETG
QREVYRGTKAALNMYMRSFAARQAPSRPMVVMAPGWVKTELGGADARLTIEESIPSLVNVLIAKQERPGLEYLDY
LGRTVPW*
Coding >Pro_DTO377G3_2|g2839.t1
ATGTCCGCTTCACGCCCCACGATCCTTATCATCGGTATTTCACGTGGCCTTGGCCACGCCATGGCGGTCGAATTC
CTAGAAAAGGGATGGAATGTTGTTGGGACAGTCCGCGGAGAGTCGCGAAAATTACTCCACGAGCTAGAAGACAAG
TACAACGGTCTGATTGACATCGAGACCTTGGACATTTGCCAACCCGATCAAATCCAGGCGCTAGACAAGTGTTTG
TCGGGAAAGATATTCGATATCCTCTTTGTCAACGCTGGAACAACGAATCGTGACCAAACCCAAAAAATTGGCGAT
GTATCAACCGAGGAGTTTGTACATGTCATGGTTACGAATGCGCTCAGCCCCATGCGTGTCGTTGAACGTCTGGCA
CATCACGTGGCTCCGAAAGGTCTTATTGGTGTGATGTCCTCTGGACAGGGAAGCATCAGCAACAATGAAACCGGT
CAGCGAGAGGTATATCGTGGCACTAAAGCCGCGCTGAACATGTACATGCGAAGCTTTGCAGCTCGTCAGGCCCCA
TCACGTCCAATGGTGGTGATGGCTCCAGGGTGGGTCAAAACCGAGCTGGGGGGTGCGGACGCTCGGCTTACCATC
GAAGAAAGCATTCCCAGCTTGGTCAATGTACTTATTGCAAAGCAAGAACGACCCGGACTCGAATACCTCGACTAC
CTCGGCCGAACTGTTCCTTGGTGA
Transcript >Pro_DTO377G3_2|g2839.t1
ATGTCCGCTTCACGCCCCACGATCCTTATCATCGGTATTTCACGTGGCCTTGGCCACGCCATGGCGGTCGAATTC
CTAGAAAAGGGATGGAATGTTGTTGGGACAGTCCGCGGAGAGTCGCGAAAATTACTCCACGAGCTAGAAGACAAG
TACAACGGTCTGATTGACATCGAGACCTTGGACATTTGCCAACCCGATCAAATCCAGGCGCTAGACAAGTGTTTG
TCGGGAAAGATATTCGATATCCTCTTTGTCAACGCTGGAACAACGAATCGTGACCAAACCCAAAAAATTGGCGAT
GTATCAACCGAGGAGTTTGTACATGTCATGGTTACGAATGCGCTCAGCCCCATGCGTGTCGTTGAACGTCTGGCA
CATCACGTGGCTCCGAAAGGTCTTATTGGTGTGATGTCCTCTGGACAGGGAAGCATCAGCAACAATGAAACCGGT
CAGCGAGAGGTATATCGTGGCACTAAAGCCGCGCTGAACATGTACATGCGAAGCTTTGCAGCTCGTCAGGCCCCA
TCACGTCCAATGGTGGTGATGGCTCCAGGGTGGGTCAAAACCGAGCTGGGGGGTGCGGACGCTCGGCTTACCATC
GAAGAAAGCATTCCCAGCTTGGTCAATGTACTTATTGCAAAGCAAGAACGACCCGGACTCGAATACCTCGACTAC
CTCGGCCGAACTGTTCCTTGGTGA
Gene >Pro_DTO377G3_2|g2839.t1
ATGTCCGCTTCACGCCCCACGATCCTTATCATCGGTATTTCACGTGGCCTTGGCCACGCCATGGCGGTCGAATTC
CTAGAAAAGGGATGGAATGTTGTTGGGACAGTCCGCGGAGAGTCGCGAAAATTACTCCACGAGCTAGAAGACAAG
TACAACGGTCTGATTGACATCGAGACCTTGGACATTTGCCAACCCGATCAAATCCAGGCGCTAGACAAGTGTTTG
TCGGGAAAGATATTCGATATCCTCTTTGTCAACGCTGGAACAACGAATCGTGACCAAACCCAAAAAATTGGCGAT
GTATCAACCGAGGAGTTTGTACATGTCATGGTTACGAATGCGCTCAGCCCCATGCGTGTCGTTGAACGTCTGGCA
CATCACGTGGCTCCGAAAGGTCTTATTGGTGTGATGTCCTCTGGACAGGGAAGCATCAGCAACAATGAAACCGGT
CAGCGAGAGGTATATCGTGGCACTAAAGCCGCGCTGAACATGTACATGCGAAGCTTTGCAGCTCGTCAGGCCCCA
TCACGTCCAATGGTGGTGATGGCTCCAGGGTGGGTCAAAACCGAGCTGGGGGGTGCGGACGCTCGGCTTACCATC
GAAGAAAGCATTCCCAGCTTGGTCAATGTACTTATTGCAAAGCAAGAACGACCCGGACTCGAATACCTCGACTAC
CTCGGCCGAACTGTTCCTTGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail