Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2836.t1
Gene name
Locationscaffold_04:10028..10900
Strand-
Gene length (bp)872
Transcript length (bp)759
Coding sequence length (bp)759
Protein length (aa) 253

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00651 BTB BTB/POZ domain 1.4E-10 21 125

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 41 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2836.t1
MELTSNSVEGTDRFVHRLGNFHRTGIFSDLTIYTADQVLSVHRIVVCSRSETFCRHFADLSSESDEDAHVFEIKD
EHPRVVEAMIRSFYGLHYDINEPEHQMCPLLFNVKVYSIADKFEVEYLKVQAKLTFVTLAQDHWDSVEFLVAAFQ
AYKTTPKLDRGLRDVVVAVCQIHRRELREKKGFEKLLEEAPGLATDLVLLSQRWLPQSASTRVRIVQSFSCLSCF
AKWQIQVDMAEYFTACPFCQDERVTAL*
Coding >Pro_DTO377G3_2|g2836.t1
ATGGAACTCACTTCCAACAGCGTCGAGGGCACTGATCGGTTTGTCCATCGACTTGGAAATTTCCACCGTACAGGC
ATCTTCTCCGATCTCACAATCTACACCGCTGACCAAGTTTTGAGCGTGCACCGAATCGTAGTCTGCAGCAGATCT
GAGACTTTCTGCAGACATTTCGCTGATCTCTCCAGTGAGAGCGACGAGGATGCTCATGTATTCGAAATAAAGGAC
GAGCATCCACGCGTCGTGGAAGCCATGATACGCTCCTTCTACGGACTACACTACGACATCAACGAACCCGAGCAC
CAAATGTGTCCCCTGTTGTTCAACGTCAAAGTATACTCCATTGCCGACAAATTCGAGGTGGAATATCTCAAAGTT
CAAGCAAAGCTAACATTCGTCACTCTCGCTCAAGATCACTGGGACTCGGTTGAATTCTTGGTTGCTGCTTTCCAG
GCATACAAAACAACACCAAAGTTGGATCGAGGTCTTCGGGATGTGGTAGTAGCGGTTTGTCAGATACACCGGAGG
GAGCTGCGCGAGAAGAAGGGATTCGAGAAACTGCTTGAAGAAGCCCCCGGCCTTGCTACCGATCTCGTCCTTCTC
TCGCAGAGGTGGTTGCCCCAGTCTGCATCCACAAGGGTCCGTATCGTCCAGTCTTTCTCTTGTTTGTCTTGCTTT
GCGAAATGGCAGATCCAGGTGGACATGGCAGAGTACTTCACTGCATGCCCGTTTTGCCAGGATGAGAGGGTTACG
GCTCTTTGA
Transcript >Pro_DTO377G3_2|g2836.t1
ATGGAACTCACTTCCAACAGCGTCGAGGGCACTGATCGGTTTGTCCATCGACTTGGAAATTTCCACCGTACAGGC
ATCTTCTCCGATCTCACAATCTACACCGCTGACCAAGTTTTGAGCGTGCACCGAATCGTAGTCTGCAGCAGATCT
GAGACTTTCTGCAGACATTTCGCTGATCTCTCCAGTGAGAGCGACGAGGATGCTCATGTATTCGAAATAAAGGAC
GAGCATCCACGCGTCGTGGAAGCCATGATACGCTCCTTCTACGGACTACACTACGACATCAACGAACCCGAGCAC
CAAATGTGTCCCCTGTTGTTCAACGTCAAAGTATACTCCATTGCCGACAAATTCGAGGTGGAATATCTCAAAGTT
CAAGCAAAGCTAACATTCGTCACTCTCGCTCAAGATCACTGGGACTCGGTTGAATTCTTGGTTGCTGCTTTCCAG
GCATACAAAACAACACCAAAGTTGGATCGAGGTCTTCGGGATGTGGTAGTAGCGGTTTGTCAGATACACCGGAGG
GAGCTGCGCGAGAAGAAGGGATTCGAGAAACTGCTTGAAGAAGCCCCCGGCCTTGCTACCGATCTCGTCCTTCTC
TCGCAGAGGTGGTTGCCCCAGTCTGCATCCACAAGGGTCCGTATCGTCCAGTCTTTCTCTTGTTTGTCTTGCTTT
GCGAAATGGCAGATCCAGGTGGACATGGCAGAGTACTTCACTGCATGCCCGTTTTGCCAGGATGAGAGGGTTACG
GCTCTTTGA
Gene >Pro_DTO377G3_2|g2836.t1
ATGGAACTCACTTCCAACAGCGTCGAGGGCACTGATCGGTTTGTCCATCGACTTGGAAAGTAAGTTCTTGAGTCT
ACACATTGTATGAATGAGGGAACTGACAGAAGACAGTTTCCACCGTACAGGCATCTTCTCCGATCTCACAATCTA
CACCGCTGACCAAGTTTTGAGCGTGCACCGAATCGTAGTCTGCAGCAGATCTGAGACTTTCTGCAGACATTTCGC
TGATCTCTCCAGTGTATGTTTCCAAAGCCCAAGCCCTTCATTATCCACGCGCCCAGCTGACTTTAATGATACAGG
AGAGCGACGAGGATGCTCATGTATTCGAAATAAAGGACGAGCATCCACGCGTCGTGGAAGCCATGATACGCTCCT
TCTACGGACTACACTACGACATCAACGAACCCGAGCACCAAATGTGTCCCCTGTTGTTCAACGTCAAAGTATACT
CCATTGCCGACAAATTCGAGGTGGAATATCTCAAAGTTCAAGCAAAGCTAACATTCGTCACTCTCGCTCAAGATC
ACTGGGACTCGGTTGAATTCTTGGTTGCTGCTTTCCAGGCATACAAAACAACACCAAAGTTGGATCGAGGTCTTC
GGGATGTGGTAGTAGCGGTTTGTCAGATACACCGGAGGGAGCTGCGCGAGAAGAAGGGATTCGAGAAACTGCTTG
AAGAAGCCCCCGGCCTTGCTACCGATCTCGTCCTTCTCTCGCAGAGGTGGTTGCCCCAGTCTGCATCCACAAGGG
TCCGTATCGTCCAGTCTTTCTCTTGTTTGTCTTGCTTTGCGAAATGGCAGATCCAGGTGGACATGGCAGAGTACT
TCACTGCATGCCCGTTTTGCCAGGATGAGAGGGTTACGGCTCTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail