Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2810.t1
Gene name
Locationscaffold_03:1014016..1014717
Strand+
Gene length (bp)701
Transcript length (bp)519
Coding sequence length (bp)519
Protein length (aa) 173

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13664 DUF4149 Domain of unknown function (DUF4149) 2.4E-28 9 116

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.5

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 45 64 19
3 84 106 22
4 145 167 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2810.t1
MDPRPYHVLSYGTLLGTQFFQSFVGGFVAFRALPRPQFANLQTAIFPIYFSLQSALPIVVALTASHGGQVLGLSG
LAAPENRLNTLLPLATVTVTGLVNMFVLRPITTNVMRERKHQETRDGKRSYDPAPHSKEMLALNKKFGRVHGISS
LVNLISLVATVWYGAVLSKRLE*
Coding >Pro_DTO377G3_2|g2810.t1
ATGGATCCTCGCCCCTATCACGTTCTAAGCTACGGCACCCTTCTAGGGACACAGTTCTTCCAGTCTTTTGTTGGA
GGCTTCGTTGCTTTCCGCGCCCTTCCGCGGCCTCAGTTTGCTAATCTGCAAACCGCCATCTTCCCCATATATTTC
TCACTGCAATCTGCGCTACCTATAGTGGTCGCCTTGACCGCTTCCCACGGGGGACAGGTATTGGGTCTGTCAGGT
CTCGCTGCACCCGAGAACCGCCTTAACACTCTCTTGCCTCTGGCAACTGTGACAGTGACCGGATTGGTGAACATG
TTCGTGTTGCGTCCCATCACCACCAACGTGATGCGCGAGCGCAAGCATCAAGAAACTCGTGATGGAAAGAGGAGC
TACGACCCGGCGCCCCATTCCAAGGAGATGCTGGCTCTGAACAAGAAGTTCGGCCGCGTGCATGGCATCTCAAGT
TTGGTCAATTTGATCAGCCTGGTTGCTACAGTCTGGTACGGTGCTGTTCTAAGCAAGAGACTTGAGTAA
Transcript >Pro_DTO377G3_2|g2810.t1
ATGGATCCTCGCCCCTATCACGTTCTAAGCTACGGCACCCTTCTAGGGACACAGTTCTTCCAGTCTTTTGTTGGA
GGCTTCGTTGCTTTCCGCGCCCTTCCGCGGCCTCAGTTTGCTAATCTGCAAACCGCCATCTTCCCCATATATTTC
TCACTGCAATCTGCGCTACCTATAGTGGTCGCCTTGACCGCTTCCCACGGGGGACAGGTATTGGGTCTGTCAGGT
CTCGCTGCACCCGAGAACCGCCTTAACACTCTCTTGCCTCTGGCAACTGTGACAGTGACCGGATTGGTGAACATG
TTCGTGTTGCGTCCCATCACCACCAACGTGATGCGCGAGCGCAAGCATCAAGAAACTCGTGATGGAAAGAGGAGC
TACGACCCGGCGCCCCATTCCAAGGAGATGCTGGCTCTGAACAAGAAGTTCGGCCGCGTGCATGGCATCTCAAGT
TTGGTCAATTTGATCAGCCTGGTTGCTACAGTCTGGTACGGTGCTGTTCTAAGCAAGAGACTTGAGTAA
Gene >Pro_DTO377G3_2|g2810.t1
ATGGATCCTCGCCCCTATCACGTTCTAAGGTTTGTTTATTAGCGAACGTCATGGCTCATATGCTAATGAGTGAGG
TAGCTACGGCACCCTTCTAGGGACACAGTTCTTCCAGGTGAGATCAATATCTGAACCGGACGCATGGTCGAATCG
TCGCCTCTAAAAGCATTGTCTGACATATCCGAAGTCTTTTGTTGGAGGCTTCGTTGCTTTCCGCGCCCTTCCGCG
GCCTCAGTTTGCTAATCTGCAAACCGCCATCTTCCCCATATATTTCTCACTGCAATCTGCGCTACCTATAGTGGT
CGCCTTGACCGCTTCCCACGGGGGACAGGTATTGGGTCTGTCAGGTCTCGCTGCACCCGAGAACCGCCTTAACAC
TCTCTTGCCTCTGGCAACTGTGACAGTGACCGGATTGGTGAACATGTTCGTGTTGCGTCCCATCACCACCAACGT
GATGCGCGAGCGCAAGCATCAAGGTGCGTTAGCTGCTGCCACCATGCTTGGGTAACATTCAATTGAATATTCTAA
CCTTCGCAGAAACTCGTGATGGAAAGAGGAGCTACGACCCGGCGCCCCATTCCAAGGAGATGCTGGCTCTGAACA
AGAAGTTCGGCCGCGTGCATGGCATCTCAAGTTTGGTCAATTTGATCAGCCTGGTTGCTACAGTCTGGTACGGTG
CTGTTCTAAGCAAGAGACTTGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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