Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g2809.t1
Gene name
Location	scaffold_03:1011003..1013692
Strand	-
Gene length (bp)	2689
Transcript length (bp)	2145
Coding sequence length (bp)	2145
Protein length (aa)	715

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08785	Ku_PK_bind	Ku C terminal domain like	6.8E-38	592	711
PF02735	Ku	Ku70/Ku80 beta-barrel domain	6.5E-34	240	442
PF03731	Ku_N	Ku70/Ku80 N-terminal alpha/beta domain	8.2E-10	6	163

GO

GO Term	Description	Terminal node
GO:0003677	DNA binding	Yes
GO:0006303	double-strand break repair via nonhomologous end joining	Yes
GO:0005488	binding	No
GO:0043170	macromolecule metabolic process	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0033554	cellular response to stress	No
GO:0006259	DNA metabolic process	No
GO:0006281	DNA repair	No
GO:0008150	biological_process	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0071704	organic substance metabolic process	No
GO:0003676	nucleic acid binding	No
GO:0044260	cellular macromolecule metabolic process	No
GO:0006302	double-strand break repair	No
GO:0008152	metabolic process	No
GO:0044238	primary metabolic process	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0046483	heterocycle metabolic process	No
GO:0003674	molecular_function	No
GO:0006807	nitrogen compound metabolic process	No
GO:0006950	response to stress	No
GO:0006974	cellular response to DNA damage stimulus	No
GO:0097159	organic cyclic compound binding	No
GO:0050896	response to stimulus	No
GO:1901363	heterocyclic compound binding	No
GO:0090304	nucleic acid metabolic process	No
GO:0044237	cellular metabolic process	No
GO:0051716	cellular response to stimulus	No
GO:0009987	cellular process	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 48	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g2809.t1 MAEKEATVYIVDMGQSMGERHHGRPMTDLEWAMQYVWDRITATVATGRKTATVGVVGLRTDETINNLEEENFSNI SILFGLGQVLMPDIRKLRETIKPSNTNRGDAISSIVIAMQMIIEYTKKNKYKRKIVLVTNGTGMMSDDNIEGIIE KMKEVNIELVIIGADFDDAEYGVKEEDKDSRKAENETLLRSLTEDCEGVYGTLEQAVSELDIPRIKVTKSMPSFK GNLMLGNPEEYDTAITIPVERYFRTYVAKPISASSFVPRSSTEPGSQAPVEGKGEGEGDALSSVRTSRTYQITDE TAPGGKIDVERDDLAKGYEYGRTAVPIEQTDENVANLQTFAGMGLIGFVQKDQYDRYMHMSNTNIIIPQRANDNA SLALSSLIHALYELESYAVARLVTKESKPPMLVLLAPSVEADYECLIEVQLPFAEDVRSYRFPPLDKIITVSGKV VTEHRNLPSAALKDAMSNFVDSMDFITTDDDGEPTDDLPIDESFSPLLHRIESAVRYRAVHPYDPVLDPSERLTQ FAHPSEEMAKNSKSHLEKLMSTADVKKVPPKTKGRKRQRETEKPLSGLDVDALLSLEPKRTKISTENAIPEFKQT LSRAENIDAIHDAVQQMAKIIETQITHSLGHSNYDRVIEGLGTMREELVDYEEPVVYNDFVRQLKGKVLREELGG DRRELWWFVRKGKLGLIGKSEVDSSAVEEEEAQEFFATN*
Coding	>Pro_DTO377G3_2\|g2809.t1 ATGGCGGAGAAAGAGGCTACAGTTTACATCGTAGACATGGGACAGTCTATGGGCGAGCGCCACCACGGCCGTCCT ATGACAGATCTCGAATGGGCCATGCAGTATGTCTGGGATAGGATCACCGCCACGGTGGCTACCGGCCGAAAGACG GCTACGGTTGGCGTGGTCGGTCTCAGGACAGATGAAACCATCAACAACTTGGAAGAAGAGAACTTCTCTAATATC TCTATCCTCTTTGGGCTTGGTCAGGTCCTCATGCCTGATATCCGGAAACTCCGAGAGACGATCAAACCCAGCAAT ACTAACAGAGGCGATGCCATCTCTTCTATTGTCATTGCCATGCAGATGATCATTGAGTACACCAAGAAAAACAAA TACAAGCGCAAGATCGTTCTGGTGACCAATGGTACCGGTATGATGAGTGATGACAATATCGAAGGTATCATCGAA AAAATGAAAGAAGTCAACATTGAGTTGGTGATCATTGGTGCCGATTTTGATGACGCTGAGTATGGTGTAAAGGAA GAAGACAAGGACAGTCGAAAGGCCGAAAACGAGACTCTTCTCCGAAGCCTGACTGAGGACTGCGAAGGTGTTTAT GGAACGCTAGAACAAGCTGTTTCGGAATTGGATATTCCGCGCATCAAAGTGACTAAAAGCATGCCATCTTTCAAA GGCAACCTCATGCTCGGCAATCCCGAAGAGTATGACACAGCTATCACTATACCTGTGGAGCGATACTTCCGAACT TATGTCGCCAAGCCAATCTCAGCAAGCTCGTTCGTGCCACGCTCCAGCACCGAACCCGGAAGTCAAGCACCGGTT GAAGGCAAGGGTGAAGGTGAAGGTGACGCTCTTAGCTCAGTGCGAACATCACGGACATATCAGATCACAGACGAA ACCGCCCCAGGGGGTAAGATTGACGTTGAACGCGATGACCTCGCCAAGGGGTACGAGTACGGACGTACAGCAGTT CCCATCGAGCAAACTGATGAGAATGTTGCAAATCTACAAACATTTGCTGGTATGGGGCTGATCGGGTTCGTTCAG AAGGATCAGTATGACCGTTACATGCACATGTCCAACACGAATATTATCATTCCTCAACGTGCAAATGACAATGCG TCTCTTGCGTTGTCTTCTCTCATCCATGCACTGTACGAGTTAGAGTCCTATGCGGTTGCCCGATTGGTGACCAAA GAATCCAAACCACCAATGCTTGTATTGCTTGCTCCATCTGTTGAAGCAGACTATGAGTGCTTGATTGAAGTACAG CTTCCATTTGCAGAAGACGTGCGGTCATATCGGTTCCCACCTTTGGATAAGATCATAACTGTCTCTGGCAAGGTG GTAACTGAACACCGAAACCTCCCAAGCGCAGCTTTGAAAGATGCGATGAGTAATTTCGTGGACAGCATGGACTTT ATTACCACTGATGATGATGGGGAACCCACCGACGATCTCCCAATTGACGAGTCATTCTCACCATTACTGCACCGT ATCGAATCAGCCGTGCGATACCGTGCTGTCCATCCCTACGATCCTGTCCTTGATCCCTCAGAGCGACTCACCCAA TTCGCACACCCCTCGGAAGAGATGGCCAAGAACTCTAAGTCCCATCTGGAGAAATTGATGTCTACGGCAGATGTC AAGAAAGTTCCACCAAAGACAAAAGGCCGTAAACGCCAACGCGAAACAGAGAAACCCCTCTCAGGTCTGGACGTC GACGCCCTCCTCAGTCTCGAACCAAAGCGAACGAAAATTTCCACCGAGAATGCAATCCCAGAGTTCAAGCAAACG CTTTCCCGAGCAGAAAACATCGATGCAATCCACGACGCTGTGCAGCAAATGGCTAAGATCATTGAGACCCAGATT ACGCACAGTCTCGGTCACTCGAATTACGACCGTGTTATCGAGGGCCTCGGTACTATGCGCGAAGAACTGGTGGAC TACGAGGAACCAGTGGTGTATAATGACTTTGTGCGCCAATTGAAGGGTAAGGTGCTGCGGGAGGAGCTGGGTGGG GATCGGAGGGAGCTGTGGTGGTTTGTAAGGAAGGGGAAGCTCGGGCTTATTGGGAAAAGTGAGGTGGATAGCTCG GCTGTCGAGGAAGAAGAGGCCCAAGAGTTTTTCGCTACCAATTGA
Transcript	>Pro_DTO377G3_2\|g2809.t1 ATGGCGGAGAAAGAGGCTACAGTTTACATCGTAGACATGGGACAGTCTATGGGCGAGCGCCACCACGGCCGTCCT ATGACAGATCTCGAATGGGCCATGCAGTATGTCTGGGATAGGATCACCGCCACGGTGGCTACCGGCCGAAAGACG GCTACGGTTGGCGTGGTCGGTCTCAGGACAGATGAAACCATCAACAACTTGGAAGAAGAGAACTTCTCTAATATC TCTATCCTCTTTGGGCTTGGTCAGGTCCTCATGCCTGATATCCGGAAACTCCGAGAGACGATCAAACCCAGCAAT ACTAACAGAGGCGATGCCATCTCTTCTATTGTCATTGCCATGCAGATGATCATTGAGTACACCAAGAAAAACAAA TACAAGCGCAAGATCGTTCTGGTGACCAATGGTACCGGTATGATGAGTGATGACAATATCGAAGGTATCATCGAA AAAATGAAAGAAGTCAACATTGAGTTGGTGATCATTGGTGCCGATTTTGATGACGCTGAGTATGGTGTAAAGGAA GAAGACAAGGACAGTCGAAAGGCCGAAAACGAGACTCTTCTCCGAAGCCTGACTGAGGACTGCGAAGGTGTTTAT GGAACGCTAGAACAAGCTGTTTCGGAATTGGATATTCCGCGCATCAAAGTGACTAAAAGCATGCCATCTTTCAAA GGCAACCTCATGCTCGGCAATCCCGAAGAGTATGACACAGCTATCACTATACCTGTGGAGCGATACTTCCGAACT TATGTCGCCAAGCCAATCTCAGCAAGCTCGTTCGTGCCACGCTCCAGCACCGAACCCGGAAGTCAAGCACCGGTT GAAGGCAAGGGTGAAGGTGAAGGTGACGCTCTTAGCTCAGTGCGAACATCACGGACATATCAGATCACAGACGAA ACCGCCCCAGGGGGTAAGATTGACGTTGAACGCGATGACCTCGCCAAGGGGTACGAGTACGGACGTACAGCAGTT CCCATCGAGCAAACTGATGAGAATGTTGCAAATCTACAAACATTTGCTGGTATGGGGCTGATCGGGTTCGTTCAG AAGGATCAGTATGACCGTTACATGCACATGTCCAACACGAATATTATCATTCCTCAACGTGCAAATGACAATGCG TCTCTTGCGTTGTCTTCTCTCATCCATGCACTGTACGAGTTAGAGTCCTATGCGGTTGCCCGATTGGTGACCAAA GAATCCAAACCACCAATGCTTGTATTGCTTGCTCCATCTGTTGAAGCAGACTATGAGTGCTTGATTGAAGTACAG CTTCCATTTGCAGAAGACGTGCGGTCATATCGGTTCCCACCTTTGGATAAGATCATAACTGTCTCTGGCAAGGTG GTAACTGAACACCGAAACCTCCCAAGCGCAGCTTTGAAAGATGCGATGAGTAATTTCGTGGACAGCATGGACTTT ATTACCACTGATGATGATGGGGAACCCACCGACGATCTCCCAATTGACGAGTCATTCTCACCATTACTGCACCGT ATCGAATCAGCCGTGCGATACCGTGCTGTCCATCCCTACGATCCTGTCCTTGATCCCTCAGAGCGACTCACCCAA TTCGCACACCCCTCGGAAGAGATGGCCAAGAACTCTAAGTCCCATCTGGAGAAATTGATGTCTACGGCAGATGTC AAGAAAGTTCCACCAAAGACAAAAGGCCGTAAACGCCAACGCGAAACAGAGAAACCCCTCTCAGGTCTGGACGTC GACGCCCTCCTCAGTCTCGAACCAAAGCGAACGAAAATTTCCACCGAGAATGCAATCCCAGAGTTCAAGCAAACG CTTTCCCGAGCAGAAAACATCGATGCAATCCACGACGCTGTGCAGCAAATGGCTAAGATCATTGAGACCCAGATT ACGCACAGTCTCGGTCACTCGAATTACGACCGTGTTATCGAGGGCCTCGGTACTATGCGCGAAGAACTGGTGGAC TACGAGGAACCAGTGGTGTATAATGACTTTGTGCGCCAATTGAAGGGTAAGGTGCTGCGGGAGGAGCTGGGTGGG GATCGGAGGGAGCTGTGGTGGTTTGTAAGGAAGGGGAAGCTCGGGCTTATTGGGAAAAGTGAGGTGGATAGCTCG GCTGTCGAGGAAGAAGAGGCCCAAGAGTTTTTCGCTACCAATTGA
Gene	>Pro_DTO377G3_2\|g2809.t1 ATGGCGGAGAAAGAGGCTACAGTTTACATCGTAGACATGGGACAGTCTATGGGCGAGCGCCACCACGGCCGTCCT ATGACAGATCTCGAATGGGCCATGCAGTATGTCTGGGATAGGATCACCGCCACGGTATGCGACTTGGCTTTGCTC AATACCAGGACACTAACAATCCTAGGTGGCTACCGGCCGAAAGACGGCTACGGTTGGCGTGGTCGGTCTCAGGAC AGATGGTAAGTGGTAGCCTACCAGTCAGTACCCATTGGGAGCCTTGTCTCATGTTCGGAGTAGAAACCATCAACA ACTTGGAAGAAGAGAACTTCTCTAATATCTCTATCCTCTTTGGGCTTGGTCAGTATGTGTGGTTTGATGAGTTGA CTGTTTCATGTCGGGTCCCTTGACTAAATTTCCTTTCAGGGTCCTCATGCCTGATATCCGGAAACTCCGAGAGAC GATCAAACCCAGCAATACTAACAGAGGCGATGGTATGTGACAGATGAAATCTCATCAAGCTGCTTTTTCTGACAT TATACAAGCCATCTCTTCTATTGTCATTGCCATGCAGATGATCATTGAGTACACCAAGAAAAACAAATACAAGCG CAAGATCGTTCTGGTGACCAATGGTACCGGTATGATGAGTGATGACAATATCGAAGGTATCATCGAAAAAATGAA AGAAGTCAACATTGAGTTGGTGATCATGTATGTTCCTCGTCTATATGACTCCGCATTATGCTAATACCATCCAGT GGTGCCGATTTTGATGACGCTGAGTATGGTGTAAAGGAAGAAGACAAGGACAGTCGAAAGGTATTAAGCCGTCTT CAATGTATTCCAATATTCATGTTAATCAAGTTCTCCTCAGGCCGAAAACGAGACTCTTCTCCGAAGCCTGACTGA GGACTGCGAAGGTGTTTATGGAACGCTAGAACAAGCTGTTTCGGAATTGGATATTCCGCGCATCAAAGTGACTAA AAGCATGCCATCTTTCAAAGGCAACCTCATGCTCGGCAATCCCGAAGAGTATGACACAGCTATCACTATACCTGT GGAGCGATACTTCCGAACTTATGTCGCCAAGCCAATCTCAGCAAGCTCGTTCGTGCCACGCTCCAGCACCGAACC CGGAAGTCAAGCACCGGTTGAAGGCAAGGGTGAAGGTGAAGGTGACGCTCTTAGCTCAGTGCGAACATCACGGAC ATATCAGATCACAGACGAAACCGCCCCAGGGGGTAAGATTGACGTTGAACGCGATGACCTCGCCAAGGGGTACGA GTACGGACGTACAGCAGTTCCCATCGAGCAAACTGATGAGAATGTTGCAAATCTACAAACATTTGCTGGTATGGG GCTGATCGGGTTCGTTCAGAAGGATCAGGTGTGTCTTCATACTAATCCCATGTGTTATACCAGCTAATCCCGTCA ACTAGTATGACCGTTACATGCACATGTCCAACACGAATATTATCATTCCTCAACGTGCAAATGACAATGCGTCTC TTGCGTTGTCTTCTCTCATCCATGCACTGTACGAGTTAGAGTCCTATGCGGTTGCCCGATTGGTGACCAAAGAAT CCAAACCACCAATGCTTGTATTGCTTGCTCCATCTGTTGAAGCAGACTATGAGTGCTTGATTGAAGTACAGCTTC CATTTGCAGAAGACGTGCGGTCATATCGGTTCCCACCTTTGGATAAGATCATAACTGTCTCTGGCAAGGTGGTAA CTGAACACCGAAACCTCCCAAGCGCAGCTTTGAAAGATGCGATGAGTAATTTCGTGGACAGCATGGACTTTATTA CCACTGATGATGATGGGTAAGTAGAGTTCACTTGATTGTCCAGTCAACTAGCTAATCAAAAGAGCCAGGGAACCC ACCGACGATCTCCCAATTGACGAGTCATTCTCACCATTACTGCACCGTATCGAATCAGCCGTGCGATACCGTGCT GTCCATCCCTACGATCCTGTCCTTGATCCCTCAGAGCGACTCACCCAATTCGCACACCCCTCGGAAGAGATGGCC AAGAACTCTAAGTCCCATCTGGAGAAATTGATGTCTACGGCAGATGTCAAGAAAGGTGAACCCTATTCTTAAACC CCATACATTCAGAAGAGCCCCTACTCACCACCGAATTTCGTTCTATAGTTCCACCAAAGACAAAAGGCCGTAAAC GCCAACGCGAAACAGAGAAACCCCTCTCAGGTCTGGACGTCGACGCCCTCCTCAGTCTCGAACCAAAGCGAACGA AAATTTCCACCGAGAATGCAATCCCAGAGTTCAAGCAAACGCTTTCCCGAGCAGAAAACATCGATGCAATCCACG ACGCTGTGCAGCAAATGGCTAAGATCATTGAGACCCAGATTACGCACAGTCTCGGTCACTCGAATTACGACCGTG TTATCGAGGGCCTCGGTACTATGCGCGAAGAACTGGTGGACTACGAGGAACCAGTGGTGTATAATGACTTTGTGC GCCAATTGAAGGGTAAGGTGCTGCGGGAGGAGCTGGGTGGGGATCGGAGGGAGCTGTGGTGGTTTGTAAGGAAGG GGAAGCTCGGGCTTATTGGGAAAAGTGAGGTGGATAGCTCGGCTGTCGAGGAAGAAGAGGCCCAAGAGGTGAGCT TTGATTTCTTAGTGGGGAGTAGAACGAGTGCTAACGCTGCATATAGTTTTTCGCTACCAATTGA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences