Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2782.t1
Gene name
Locationscaffold_03:938551..940276
Strand+
Gene length (bp)1725
Transcript length (bp)1725
Coding sequence length (bp)1725
Protein length (aa) 575

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02776 TPP_enzyme_N Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1.5E-34 6 175
PF00205 TPP_enzyme_M Thiamine pyrophosphate enzyme, central domain 3.7E-19 201 319
PF02775 TPP_enzyme_C Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 1.1E-13 398 482

GO

GO Term Description Terminal node
GO:0000287 magnesium ion binding Yes
GO:0003824 catalytic activity Yes
GO:0030976 thiamine pyrophosphate binding Yes
GO:0097159 organic cyclic compound binding No
GO:0036094 small molecule binding No
GO:0043168 anion binding No
GO:0043169 cation binding No
GO:0046872 metal ion binding No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0050662 coenzyme binding No
GO:0048037 cofactor binding No
GO:0019842 vitamin binding No
GO:1901681 sulfur compound binding No
GO:0043167 ion binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2782.t1
MTQDIKLAEYLFTRLRQLGVDSMFGVPGDYNLRLLDFVTPAGLHWVGNCNELNAAYAADGYGRIKGLSALITTYG
VGELSAINGIAGAYAENTPVLHIVGTPPRPLQSARTFMHHTFSDGDYRRFANMSKHVTAAQVRLEDAATAPERID
YVLRQALVHSRPVYLELPDDMPDVLVSAKNLETKISIPQPPSSTQEPEVLARILEKVYSAKRPLIFVDGESTGLG
IVEQIDALIKATNWPTWTTVYGKGLVNEQLPNVYGLYAGAFGDKSAQEYFDEADLILAFGLHNSDSNTYYFTTIP
KPAVSIAFSGSTVQIDNDTYRDLSARNILSNILQSLDSTRLVKATGPPKQEITLANIKNTDPLAQDNFYRLVNPL
LREGDIILTETGTASHGGRNFKLPPKCRIFGAVTWLSIGFMLPATLGTALAQREHNKVTESKSQTILFIGDGSLQ
MTAQEISVMIREKLNIIIFIINNEGYTIERVIHGRKQVYNDVPFWRHAQALNYFGADQEHAANNSFTARTCGELK
DVLASEQIQNGSGVRLVEVFMHREDVQGVLLHLLNKQLAQEKGEAEQQS*
Coding >Pro_DTO377G3_2|g2782.t1
ATGACTCAAGATATAAAACTCGCAGAGTACCTGTTTACCCGGTTGCGCCAGCTGGGCGTCGACTCCATGTTCGGC
GTCCCTGGTGACTACAACCTTCGTCTATTAGATTTCGTCACTCCCGCCGGTCTCCACTGGGTGGGCAACTGCAAT
GAACTCAATGCCGCCTATGCAGCGGACGGATATGGTCGCATCAAAGGCCTGTCTGCACTGATCACTACATATGGC
GTTGGCGAGCTGTCCGCTATCAACGGCATTGCAGGCGCCTATGCCGAGAATACACCTGTGTTACACATTGTCGGA
ACTCCACCGCGCCCACTTCAGAGCGCGCGCACGTTTATGCACCACACTTTCTCAGATGGCGACTACCGTCGCTTT
GCGAACATGTCGAAGCATGTCACTGCAGCTCAAGTGAGGCTGGAAGACGCTGCCACAGCGCCGGAACGGATCGAC
TATGTCCTGCGCCAGGCGTTGGTCCACAGCCGTCCGGTCTACCTTGAATTGCCCGATGATATGCCCGACGTGCTG
GTGTCGGCTAAAAATTTGGAAACAAAGATCAGCATTCCTCAACCACCAAGCTCTACACAAGAGCCCGAAGTGCTG
GCTCGCATCTTGGAGAAAGTGTACAGTGCCAAGCGTCCGCTCATCTTCGTGGACGGAGAAAGCACAGGTCTTGGT
ATCGTCGAGCAGATCGATGCTCTGATCAAAGCAACCAACTGGCCCACATGGACAACCGTGTACGGCAAAGGCCTA
GTCAACGAGCAGCTGCCAAATGTGTACGGATTGTACGCAGGAGCCTTTGGCGACAAGTCAGCGCAGGAGTACTTC
GACGAGGCAGATTTGATTCTGGCATTCGGACTGCACAATAGCGACTCCAACACCTATTACTTTACGACAATCCCC
AAGCCCGCAGTGTCAATCGCCTTTTCAGGCAGTACCGTTCAAATCGACAATGATACTTATCGCGACCTGTCCGCC
CGCAACATTCTATCAAACATACTCCAAAGCCTCGACTCCACCCGCCTAGTCAAGGCCACCGGACCCCCGAAACAA
GAAATCACATTGGCCAACATCAAAAACACAGACCCCCTCGCGCAAGACAACTTCTACCGCCTGGTAAACCCGCTC
TTGCGCGAAGGCGACATAATCCTCACCGAGACGGGCACCGCCTCGCATGGCGGCCGGAACTTCAAACTGCCTCCG
AAATGCCGCATCTTCGGCGCGGTCACTTGGCTCTCGATTGGATTCATGCTCCCGGCAACACTAGGCACAGCGCTA
GCGCAGCGTGAGCACAACAAGGTCACAGAAAGCAAGAGTCAGACTATTTTGTTCATCGGCGATGGAAGTCTGCAG
ATGACAGCGCAGGAGATCAGTGTGATGATCCGTGAGAAGTTGAACATTATTATTTTCATCATCAATAACGAAGGC
TATACCATTGAGCGGGTGATCCACGGACGCAAGCAGGTGTACAATGATGTGCCTTTCTGGAGACACGCGCAGGCG
CTGAACTATTTCGGAGCTGATCAAGAGCATGCGGCGAATAATAGTTTTACGGCGAGGACCTGTGGCGAGTTGAAG
GATGTGTTGGCTAGCGAGCAGATTCAGAATGGATCTGGGGTGAGGCTTGTTGAAGTCTTTATGCATAGGGAGGAT
GTGCAGGGAGTTTTGCTGCATTTACTGAACAAGCAACTTGCTCAGGAGAAGGGGGAGGCAGAGCAGCAGAGTTAG
Transcript >Pro_DTO377G3_2|g2782.t1
ATGACTCAAGATATAAAACTCGCAGAGTACCTGTTTACCCGGTTGCGCCAGCTGGGCGTCGACTCCATGTTCGGC
GTCCCTGGTGACTACAACCTTCGTCTATTAGATTTCGTCACTCCCGCCGGTCTCCACTGGGTGGGCAACTGCAAT
GAACTCAATGCCGCCTATGCAGCGGACGGATATGGTCGCATCAAAGGCCTGTCTGCACTGATCACTACATATGGC
GTTGGCGAGCTGTCCGCTATCAACGGCATTGCAGGCGCCTATGCCGAGAATACACCTGTGTTACACATTGTCGGA
ACTCCACCGCGCCCACTTCAGAGCGCGCGCACGTTTATGCACCACACTTTCTCAGATGGCGACTACCGTCGCTTT
GCGAACATGTCGAAGCATGTCACTGCAGCTCAAGTGAGGCTGGAAGACGCTGCCACAGCGCCGGAACGGATCGAC
TATGTCCTGCGCCAGGCGTTGGTCCACAGCCGTCCGGTCTACCTTGAATTGCCCGATGATATGCCCGACGTGCTG
GTGTCGGCTAAAAATTTGGAAACAAAGATCAGCATTCCTCAACCACCAAGCTCTACACAAGAGCCCGAAGTGCTG
GCTCGCATCTTGGAGAAAGTGTACAGTGCCAAGCGTCCGCTCATCTTCGTGGACGGAGAAAGCACAGGTCTTGGT
ATCGTCGAGCAGATCGATGCTCTGATCAAAGCAACCAACTGGCCCACATGGACAACCGTGTACGGCAAAGGCCTA
GTCAACGAGCAGCTGCCAAATGTGTACGGATTGTACGCAGGAGCCTTTGGCGACAAGTCAGCGCAGGAGTACTTC
GACGAGGCAGATTTGATTCTGGCATTCGGACTGCACAATAGCGACTCCAACACCTATTACTTTACGACAATCCCC
AAGCCCGCAGTGTCAATCGCCTTTTCAGGCAGTACCGTTCAAATCGACAATGATACTTATCGCGACCTGTCCGCC
CGCAACATTCTATCAAACATACTCCAAAGCCTCGACTCCACCCGCCTAGTCAAGGCCACCGGACCCCCGAAACAA
GAAATCACATTGGCCAACATCAAAAACACAGACCCCCTCGCGCAAGACAACTTCTACCGCCTGGTAAACCCGCTC
TTGCGCGAAGGCGACATAATCCTCACCGAGACGGGCACCGCCTCGCATGGCGGCCGGAACTTCAAACTGCCTCCG
AAATGCCGCATCTTCGGCGCGGTCACTTGGCTCTCGATTGGATTCATGCTCCCGGCAACACTAGGCACAGCGCTA
GCGCAGCGTGAGCACAACAAGGTCACAGAAAGCAAGAGTCAGACTATTTTGTTCATCGGCGATGGAAGTCTGCAG
ATGACAGCGCAGGAGATCAGTGTGATGATCCGTGAGAAGTTGAACATTATTATTTTCATCATCAATAACGAAGGC
TATACCATTGAGCGGGTGATCCACGGACGCAAGCAGGTGTACAATGATGTGCCTTTCTGGAGACACGCGCAGGCG
CTGAACTATTTCGGAGCTGATCAAGAGCATGCGGCGAATAATAGTTTTACGGCGAGGACCTGTGGCGAGTTGAAG
GATGTGTTGGCTAGCGAGCAGATTCAGAATGGATCTGGGGTGAGGCTTGTTGAAGTCTTTATGCATAGGGAGGAT
GTGCAGGGAGTTTTGCTGCATTTACTGAACAAGCAACTTGCTCAGGAGAAGGGGGAGGCAGAGCAGCAGAGTTAG
Gene >Pro_DTO377G3_2|g2782.t1
ATGACTCAAGATATAAAACTCGCAGAGTACCTGTTTACCCGGTTGCGCCAGCTGGGCGTCGACTCCATGTTCGGC
GTCCCTGGTGACTACAACCTTCGTCTATTAGATTTCGTCACTCCCGCCGGTCTCCACTGGGTGGGCAACTGCAAT
GAACTCAATGCCGCCTATGCAGCGGACGGATATGGTCGCATCAAAGGCCTGTCTGCACTGATCACTACATATGGC
GTTGGCGAGCTGTCCGCTATCAACGGCATTGCAGGCGCCTATGCCGAGAATACACCTGTGTTACACATTGTCGGA
ACTCCACCGCGCCCACTTCAGAGCGCGCGCACGTTTATGCACCACACTTTCTCAGATGGCGACTACCGTCGCTTT
GCGAACATGTCGAAGCATGTCACTGCAGCTCAAGTGAGGCTGGAAGACGCTGCCACAGCGCCGGAACGGATCGAC
TATGTCCTGCGCCAGGCGTTGGTCCACAGCCGTCCGGTCTACCTTGAATTGCCCGATGATATGCCCGACGTGCTG
GTGTCGGCTAAAAATTTGGAAACAAAGATCAGCATTCCTCAACCACCAAGCTCTACACAAGAGCCCGAAGTGCTG
GCTCGCATCTTGGAGAAAGTGTACAGTGCCAAGCGTCCGCTCATCTTCGTGGACGGAGAAAGCACAGGTCTTGGT
ATCGTCGAGCAGATCGATGCTCTGATCAAAGCAACCAACTGGCCCACATGGACAACCGTGTACGGCAAAGGCCTA
GTCAACGAGCAGCTGCCAAATGTGTACGGATTGTACGCAGGAGCCTTTGGCGACAAGTCAGCGCAGGAGTACTTC
GACGAGGCAGATTTGATTCTGGCATTCGGACTGCACAATAGCGACTCCAACACCTATTACTTTACGACAATCCCC
AAGCCCGCAGTGTCAATCGCCTTTTCAGGCAGTACCGTTCAAATCGACAATGATACTTATCGCGACCTGTCCGCC
CGCAACATTCTATCAAACATACTCCAAAGCCTCGACTCCACCCGCCTAGTCAAGGCCACCGGACCCCCGAAACAA
GAAATCACATTGGCCAACATCAAAAACACAGACCCCCTCGCGCAAGACAACTTCTACCGCCTGGTAAACCCGCTC
TTGCGCGAAGGCGACATAATCCTCACCGAGACGGGCACCGCCTCGCATGGCGGCCGGAACTTCAAACTGCCTCCG
AAATGCCGCATCTTCGGCGCGGTCACTTGGCTCTCGATTGGATTCATGCTCCCGGCAACACTAGGCACAGCGCTA
GCGCAGCGTGAGCACAACAAGGTCACAGAAAGCAAGAGTCAGACTATTTTGTTCATCGGCGATGGAAGTCTGCAG
ATGACAGCGCAGGAGATCAGTGTGATGATCCGTGAGAAGTTGAACATTATTATTTTCATCATCAATAACGAAGGC
TATACCATTGAGCGGGTGATCCACGGACGCAAGCAGGTGTACAATGATGTGCCTTTCTGGAGACACGCGCAGGCG
CTGAACTATTTCGGAGCTGATCAAGAGCATGCGGCGAATAATAGTTTTACGGCGAGGACCTGTGGCGAGTTGAAG
GATGTGTTGGCTAGCGAGCAGATTCAGAATGGATCTGGGGTGAGGCTTGTTGAAGTCTTTATGCATAGGGAGGAT
GTGCAGGGAGTTTTGCTGCATTTACTGAACAAGCAACTTGCTCAGGAGAAGGGGGAGGCAGAGCAGCAGAGTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail