Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2770.t1
Gene name
Locationscaffold_03:907601..908436
Strand-
Gene length (bp)835
Transcript length (bp)717
Coding sequence length (bp)717
Protein length (aa) 239

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02798 GST_N Glutathione S-transferase, N-terminal domain 3.9E-16 4 78
PF13417 GST_N_3 Glutathione S-transferase, N-terminal domain 1.5E-13 7 83
PF00043 GST_C Glutathione S-transferase, C-terminal domain 3.4E-12 138 196
PF13409 GST_N_2 Glutathione S-transferase, N-terminal domain 6.0E-10 17 77
PF13410 GST_C_2 Glutathione S-transferase, C-terminal domain 1.0E-07 132 194
PF14497 GST_C_3 Glutathione S-transferase, C-terminal domain 3.1E-07 138 203

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0006749 glutathione metabolic process Yes
GO:0034641 cellular nitrogen compound metabolic process No
GO:0008150 biological_process No
GO:0005488 binding No
GO:0009987 cellular process No
GO:1901564 organonitrogen compound metabolic process No
GO:0044237 cellular metabolic process No
GO:0043603 cellular amide metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0008152 metabolic process No
GO:0006518 peptide metabolic process No
GO:0006790 sulfur compound metabolic process No
GO:0003674 molecular_function No
GO:0006575 cellular modified amino acid metabolic process No
GO:0071704 organic substance metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 452.07 273.13 631.01
5d_25C Five days - 25 degrees Celsius 516.59 308.37 724.80
7d_25C Seven days - 25 degrees Celsius 471.82 283.14 660.50
10d_25C Ten days - 25 degrees Celsius 837.82 486.79 1188.84
7d_15C Seven days - 15 degrees Celsius 475.58 279.78 671.38
7d_30C Seven days - 30 degrees Celsius 502.93 298.56 707.30

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.635476 no
3d_25C 7d_25C 0.901248 no
3d_25C 7d_15C 0.884429 no
3d_25C 7d_30C 0.722713 no
3d_25C 10d_25C 0.003625 yes
5d_25C 7d_25C 0.761952 no
5d_25C 7d_15C 0.793938 no
5d_25C 7d_30C 0.940482 no
5d_25C 10d_25C 0.030434 yes
7d_25C 7d_15C 0.983077 no
7d_25C 7d_30C 0.846719 no
7d_25C 10d_25C 0.005626 yes
7d_15C 7d_30C 0.870761 no
7d_15C 10d_25C 0.011993 yes
7d_30C 10d_25C 0.017762 yes

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2770.t1
MSSNITLYTWPTPNGIKASITLEELGLAYKTEGLDISSNLNPQKEEWFLKINPNGRIPALLDGSQRVFESGAIMT
YLVDKYDTDRKISYAPGTSEHVEQTSWLMFQMGGLGPMQGQANHFRLFANTRSDYGINRYINETKRLFSVLESRL
KESPYLAGEKYTIADIASFSWVRGAPVSLEIDLSEFPALKKWVEEIDKRAAVQKGVDVPHSTRTPEQRAEFFRNC
RAKIDAMTTSDQH*
Coding >Pro_DTO377G3_2|g2770.t1
ATGTCTTCAAACATTACCCTATATACCTGGCCCACGCCGAATGGCATCAAAGCTTCCATCACCCTCGAGGAGCTT
GGTCTAGCTTATAAAACTGAAGGCCTTGATATCTCCTCCAATTTGAATCCCCAAAAGGAAGAATGGTTCCTGAAG
ATCAACCCCAACGGCCGCATCCCCGCCCTACTCGATGGCTCGCAGCGCGTCTTTGAGAGCGGAGCAATCATGACA
TATCTAGTCGACAAGTATGACACCGACCGGAAGATCAGTTACGCCCCTGGTACCTCGGAGCACGTCGAACAAACA
TCCTGGTTAATGTTCCAGATGGGTGGGCTCGGGCCTATGCAAGGACAAGCGAACCATTTCCGTCTCTTCGCCAAT
ACGCGTTCCGATTACGGTATCAACCGTTATATCAACGAGACGAAGCGCCTCTTCTCGGTCCTCGAATCGCGTTTG
AAGGAAAGCCCTTACCTCGCGGGTGAGAAGTATACTATTGCCGATATTGCGAGTTTCTCTTGGGTTCGTGGTGCT
CCTGTTTCCTTGGAGATTGATCTATCTGAATTCCCCGCTTTGAAAAAGTGGGTCGAGGAGATTGATAAGCGTGCT
GCTGTTCAAAAGGGAGTCGATGTTCCTCATTCGACTAGGACTCCTGAGCAGAGAGCTGAATTTTTCCGGAATTGC
CGGGCCAAGATTGATGCCATGACCACTTCTGATCAGCATTGA
Transcript >Pro_DTO377G3_2|g2770.t1
ATGTCTTCAAACATTACCCTATATACCTGGCCCACGCCGAATGGCATCAAAGCTTCCATCACCCTCGAGGAGCTT
GGTCTAGCTTATAAAACTGAAGGCCTTGATATCTCCTCCAATTTGAATCCCCAAAAGGAAGAATGGTTCCTGAAG
ATCAACCCCAACGGCCGCATCCCCGCCCTACTCGATGGCTCGCAGCGCGTCTTTGAGAGCGGAGCAATCATGACA
TATCTAGTCGACAAGTATGACACCGACCGGAAGATCAGTTACGCCCCTGGTACCTCGGAGCACGTCGAACAAACA
TCCTGGTTAATGTTCCAGATGGGTGGGCTCGGGCCTATGCAAGGACAAGCGAACCATTTCCGTCTCTTCGCCAAT
ACGCGTTCCGATTACGGTATCAACCGTTATATCAACGAGACGAAGCGCCTCTTCTCGGTCCTCGAATCGCGTTTG
AAGGAAAGCCCTTACCTCGCGGGTGAGAAGTATACTATTGCCGATATTGCGAGTTTCTCTTGGGTTCGTGGTGCT
CCTGTTTCCTTGGAGATTGATCTATCTGAATTCCCCGCTTTGAAAAAGTGGGTCGAGGAGATTGATAAGCGTGCT
GCTGTTCAAAAGGGAGTCGATGTTCCTCATTCGACTAGGACTCCTGAGCAGAGAGCTGAATTTTTCCGGAATTGC
CGGGCCAAGATTGATGCCATGACCACTTCTGATCAGCATTGA
Gene >Pro_DTO377G3_2|g2770.t1
ATGTCTTCAAACATTACCCTATATACCTGGCCCACGCCGAATGGCATCAAAGCTTCCATCACCCTCGAGGAGCTT
GGTCTAGCTTATAAAACTGAAGGCCTTGATATCTCCTCCAATTTGAATCCCCAAAAGGAAGAGTACACAACCACC
TCTACTACACAATACGACATGTCACATAAGCTGATGAAAGCCCTTGAACAGATGGTTCCTGAAGATCAACCCCAA
CGGCCGCATCCCCGCCCTACTCGATGGCTCGCAGCGCGTCTTTGAGAGCGGAGCAATCATGACATATCTAGTCGA
CAAGTATGACACCGACCGGAAGATCAGTTACGCCCCTGGTACCTCGGAGCACGTCGAACAAACATCCTGGTTAAT
GTTCCAGATGGGTGGGCTCGGGCCTATGCAAGGTGCGTTCAAAATCTCTTGTACGTGTGTTTCAGGTTCTCTCTC
ACACCCAATAGGACAAGCGAACCATTTCCGTCTCTTCGCCAATACGCGTTCCGATTACGGTATCAACCGTTATAT
CAACGAGACGAAGCGCCTCTTCTCGGTCCTCGAATCGCGTTTGAAGGAAAGCCCTTACCTCGCGGGTGAGAAGTA
TACTATTGCCGATATTGCGAGTTTCTCTTGGGTTCGTGGTGCTCCTGTTTCCTTGGAGATTGATCTATCTGAATT
CCCCGCTTTGAAAAAGTGGGTCGAGGAGATTGATAAGCGTGCTGCTGTTCAAAAGGGAGTCGATGTTCCTCATTC
GACTAGGACTCCTGAGCAGAGAGCTGAATTTTTCCGGAATTGCCGGGCCAAGATTGATGCCATGACCACTTCTGA
TCAGCATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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