© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g2769.t1 |
| Gene name | |
| Location | scaffold_03:904679..907402 |
| Strand | + |
| Gene length (bp) | 2723 |
| Transcript length (bp) | 2559 |
| Coding sequence length (bp) | 2559 |
| Protein length (aa) | 853 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00933 | Glyco_hydro_3 | Glycosyl hydrolase family 3 N terminal domain | 5.5E-86 | 6 | 329 |
| PF00583 | Acetyltransf_1 | Acetyltransferase (GNAT) family | 1.7E-10 | 574 | 646 |
| PF00583 | Acetyltransf_1 | Acetyltransferase (GNAT) family | 4.2E-05 | 779 | 841 |
| PF13508 | Acetyltransf_7 | Acetyltransferase (GNAT) domain | 1.3E-07 | 578 | 675 |
| PF13673 | Acetyltransf_10 | Acetyltransferase (GNAT) domain | 8.7E-07 | 565 | 636 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008080 | N-acetyltransferase activity | Yes |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | Yes |
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0016410 | N-acyltransferase activity | No |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| GO:0008150 | biological_process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0016407 | acetyltransferase activity | No |
| GO:0008152 | metabolic process | No |
| GO:0016740 | transferase activity | No |
| GO:0016746 | acyltransferase activity | No |
| GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | No |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| GO:0016787 | hydrolase activity | No |
| GO:0071704 | organic substance metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| 3d_25C | Three days - 25 degrees Celsius | 35.62 | 21.66 | 49.58 |
| 5d_25C | Five days - 25 degrees Celsius | 30.82 | 18.65 | 42.99 |
| 7d_25C | Seven days - 25 degrees Celsius | 26.82 | 16.02 | 37.62 |
| 10d_25C | Ten days - 25 degrees Celsius | 27.08 | 16.14 | 38.02 |
| 7d_15C | Seven days - 15 degrees Celsius | 35.58 | 21.29 | 49.87 |
| 7d_30C | Seven days - 30 degrees Celsius | 26.75 | 15.78 | 37.72 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| 3d_25C | 5d_25C | 0.579339 | no |
| 3d_25C | 7d_25C | 0.220632 | no |
| 3d_25C | 7d_15C | 0.997259 | no |
| 3d_25C | 7d_30C | 0.222787 | no |
| 3d_25C | 10d_25C | 0.239111 | no |
| 5d_25C | 7d_25C | 0.606521 | no |
| 5d_25C | 7d_15C | 0.590428 | no |
| 5d_25C | 7d_30C | 0.608432 | no |
| 5d_25C | 10d_25C | 0.639264 | no |
| 7d_25C | 7d_15C | 0.222685 | no |
| 7d_25C | 7d_30C | 0.994134 | no |
| 7d_25C | 10d_25C | 0.979739 | no |
| 7d_15C | 7d_30C | 0.229627 | no |
| 7d_15C | 10d_25C | 0.245118 | no |
| 7d_30C | 10d_25C | 0.973834 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g2769.t1 MVSSDLKKQVGQLFAVGFYGCTPSPEIKILIHDYHVGGIVLFSRNFENSEQLQALTLALQNEARLAGHERPLLIG IDQENGLVTRISPPIAAQVPGAMALGATHDPECAYSAGKATGETLSFFGINMNYAPVCDINSEPLNPVVGVRSFG DDPEFVGRFASAAARGLREQNIVPSVKHFPGHGDTAVDSHYGLPVIPKTRDQLERCELIPFRRAVAEGIETVMTA HISLPCIDLTRPATLSPDVMGILRKDMAYDGMIITDCLEMDGIRSTYGTEEGSVLALRAGSDSIMICHTFDVQVA SIKAVCEAIKSGRIEQSRLADACRHVATVKDKYLNWDVALQKSNLADLNSLNNRIAETTMDIYSRSTTLVRDKNG ILPLSKTSIIIFLFPGDNIPVGGAVDGEGTGRPGLYQSNRYLDVLRQHNNSIAELRYGATGLTSEQWRTLEVADV VIFTSFNARESPYQESLGLELAERVHALVHIAVCNPYDFLDAPSVKTYITTYEPTIEAFSVAADIMFGALVPTGA LPLGINASTKTSAVVMPFDAQRDLDEVVEVWAAALPTYLIPAESLRSLIVRPHGHHFIARFGSQLVGFCLAYTNA HSAPNTVYIAVLAVSPKYQHQGIGIALLDETRAYFRATFGFNNVKLGSSFPRFWPGIPQDLPETVQHFFTHRGFR LSPPSARSVDLYQDIRNFQSPEKYITRARERGFRFAPLKPEDYEACLVGQRKNFSKDSSWVEAYVALHPDKYPDS VMIAFDSHGQQVGWTLMLGPSYALNKSWAFPQTCGPNTGLIGAVGIDESHRKHGIGLALICHAIENMKQRGIEGV FVDWVALDGWYEQVGFKTWRSYRPGEL* |
| Coding | >Pro_DTO377G3_2|g2769.t1 ATGGTTTCTTCAGATCTTAAAAAGCAGGTTGGCCAGCTCTTCGCGGTGGGGTTCTATGGCTGCACCCCAAGTCCC GAAATCAAGATTTTGATTCATGACTACCACGTTGGAGGTATCGTTCTCTTCTCGCGCAATTTTGAGAATTCAGAA CAGCTCCAGGCCTTGACACTAGCTTTACAGAATGAAGCCAGATTGGCTGGACATGAGCGACCATTATTGATCGGA ATCGATCAGGAGAATGGGTTGGTCACTCGCATATCTCCGCCAATCGCTGCTCAAGTACCAGGCGCCATGGCACTC GGCGCCACGCATGACCCGGAGTGCGCCTACAGTGCGGGGAAAGCCACGGGGGAAACTTTGAGTTTCTTCGGGATT AACATGAACTATGCACCGGTGTGCGATATCAACTCGGAGCCCTTAAACCCAGTTGTTGGTGTACGCAGCTTTGGT GATGACCCTGAATTTGTGGGCCGGTTTGCGAGTGCGGCCGCGCGGGGTTTGCGGGAGCAAAACATCGTCCCTAGT GTGAAGCATTTTCCAGGTCATGGAGACACAGCTGTGGACTCGCATTATGGACTACCGGTGATTCCCAAAACAAGG GATCAGCTGGAGCGTTGCGAATTGATTCCATTTAGGCGGGCTGTCGCTGAAGGCATCGAGACCGTCATGACTGCT CATATCTCGCTGCCCTGTATCGATCTCACGCGGCCTGCAACACTTTCTCCGGATGTTATGGGGATTTTGCGCAAG GACATGGCCTATGATGGTATGATCATCACAGACTGCCTGGAGATGGATGGAATCCGCTCTACATACGGTACAGAA GAAGGCTCGGTCCTAGCGTTGCGCGCTGGCAGCGATAGCATCATGATCTGTCATACCTTTGATGTGCAGGTAGCA TCGATCAAGGCAGTTTGTGAAGCAATAAAGTCCGGCAGAATCGAGCAGTCACGACTGGCGGACGCTTGTCGCCAT GTTGCTACGGTGAAGGACAAGTATTTGAACTGGGATGTCGCTCTTCAAAAATCTAATCTCGCAGACTTGAACTCG CTCAACAATAGAATTGCCGAGACGACTATGGATATATATTCTCGATCGACCACACTCGTTCGTGACAAAAATGGC ATTCTCCCCCTATCAAAGACTTCAATCATCATCTTCCTCTTCCCTGGAGATAATATCCCAGTCGGTGGTGCGGTT GACGGCGAAGGAACGGGGAGGCCAGGATTATATCAGTCTAACAGATATCTTGATGTCTTGCGGCAACACAACAAT TCCATTGCGGAGCTCAGATACGGAGCGACCGGTTTGACTTCGGAGCAATGGCGAACCCTTGAAGTCGCTGATGTG GTGATTTTCACTTCATTCAATGCAAGAGAGTCGCCATACCAGGAGTCATTAGGCTTGGAACTCGCTGAACGTGTT CATGCATTGGTGCATATTGCTGTTTGCAACCCTTACGACTTCCTTGATGCTCCTAGTGTGAAGACCTATATTACC ACATACGAGCCGACCATCGAGGCATTTTCTGTGGCTGCCGATATCATGTTTGGAGCATTAGTCCCGACAGGTGCT CTTCCGCTGGGGATTAATGCTTCGACAAAGACCTCTGCGGTAGTAATGCCATTTGATGCGCAAAGAGATCTGGAT GAGGTGGTCGAAGTCTGGGCCGCTGCTCTCCCGACCTACCTTATTCCCGCTGAAAGTTTGCGGTCTCTGATAGTA CGCCCGCATGGTCACCATTTCATCGCGCGTTTTGGATCGCAGCTAGTAGGCTTCTGTCTTGCTTATACAAATGCC CATAGTGCACCAAACACCGTGTATATCGCAGTTCTTGCCGTGTCGCCAAAGTACCAACATCAAGGCATTGGAATT GCCTTGCTAGACGAAACAAGAGCATACTTCCGGGCAACCTTTGGCTTCAATAATGTGAAGCTGGGCAGCTCATTC CCCCGCTTTTGGCCCGGGATACCCCAGGACCTTCCAGAAACAGTGCAACATTTCTTCACTCACCGTGGTTTCCGA CTCAGCCCTCCCAGTGCCCGGTCGGTTGATTTGTACCAAGATATTCGGAACTTCCAGTCGCCAGAGAAGTATATC ACTCGTGCCCGGGAGCGAGGCTTCCGCTTCGCGCCATTAAAACCCGAAGATTACGAGGCCTGTTTGGTTGGCCAA AGAAAAAACTTCTCTAAGGACAGTAGCTGGGTGGAGGCATACGTCGCTTTACATCCCGACAAGTATCCCGACAGT GTGATGATAGCATTCGACTCTCACGGCCAGCAGGTTGGTTGGACACTAATGCTCGGTCCATCATATGCTTTGAAC AAGTCTTGGGCATTCCCCCAAACCTGTGGTCCAAACACAGGGCTCATTGGTGCCGTAGGAATTGATGAATCACAC CGCAAGCATGGCATTGGACTGGCATTGATCTGTCATGCTATTGAAAACATGAAGCAGCGAGGCATTGAAGGTGTC TTTGTAGACTGGGTTGCGCTCGACGGGTGGTATGAGCAGGTTGGGTTCAAGACCTGGAGAAGCTACAGGCCCGGG GAGCTTTGA |
| Transcript | >Pro_DTO377G3_2|g2769.t1 ATGGTTTCTTCAGATCTTAAAAAGCAGGTTGGCCAGCTCTTCGCGGTGGGGTTCTATGGCTGCACCCCAAGTCCC GAAATCAAGATTTTGATTCATGACTACCACGTTGGAGGTATCGTTCTCTTCTCGCGCAATTTTGAGAATTCAGAA CAGCTCCAGGCCTTGACACTAGCTTTACAGAATGAAGCCAGATTGGCTGGACATGAGCGACCATTATTGATCGGA ATCGATCAGGAGAATGGGTTGGTCACTCGCATATCTCCGCCAATCGCTGCTCAAGTACCAGGCGCCATGGCACTC GGCGCCACGCATGACCCGGAGTGCGCCTACAGTGCGGGGAAAGCCACGGGGGAAACTTTGAGTTTCTTCGGGATT AACATGAACTATGCACCGGTGTGCGATATCAACTCGGAGCCCTTAAACCCAGTTGTTGGTGTACGCAGCTTTGGT GATGACCCTGAATTTGTGGGCCGGTTTGCGAGTGCGGCCGCGCGGGGTTTGCGGGAGCAAAACATCGTCCCTAGT GTGAAGCATTTTCCAGGTCATGGAGACACAGCTGTGGACTCGCATTATGGACTACCGGTGATTCCCAAAACAAGG GATCAGCTGGAGCGTTGCGAATTGATTCCATTTAGGCGGGCTGTCGCTGAAGGCATCGAGACCGTCATGACTGCT CATATCTCGCTGCCCTGTATCGATCTCACGCGGCCTGCAACACTTTCTCCGGATGTTATGGGGATTTTGCGCAAG GACATGGCCTATGATGGTATGATCATCACAGACTGCCTGGAGATGGATGGAATCCGCTCTACATACGGTACAGAA GAAGGCTCGGTCCTAGCGTTGCGCGCTGGCAGCGATAGCATCATGATCTGTCATACCTTTGATGTGCAGGTAGCA TCGATCAAGGCAGTTTGTGAAGCAATAAAGTCCGGCAGAATCGAGCAGTCACGACTGGCGGACGCTTGTCGCCAT GTTGCTACGGTGAAGGACAAGTATTTGAACTGGGATGTCGCTCTTCAAAAATCTAATCTCGCAGACTTGAACTCG CTCAACAATAGAATTGCCGAGACGACTATGGATATATATTCTCGATCGACCACACTCGTTCGTGACAAAAATGGC ATTCTCCCCCTATCAAAGACTTCAATCATCATCTTCCTCTTCCCTGGAGATAATATCCCAGTCGGTGGTGCGGTT GACGGCGAAGGAACGGGGAGGCCAGGATTATATCAGTCTAACAGATATCTTGATGTCTTGCGGCAACACAACAAT TCCATTGCGGAGCTCAGATACGGAGCGACCGGTTTGACTTCGGAGCAATGGCGAACCCTTGAAGTCGCTGATGTG GTGATTTTCACTTCATTCAATGCAAGAGAGTCGCCATACCAGGAGTCATTAGGCTTGGAACTCGCTGAACGTGTT CATGCATTGGTGCATATTGCTGTTTGCAACCCTTACGACTTCCTTGATGCTCCTAGTGTGAAGACCTATATTACC ACATACGAGCCGACCATCGAGGCATTTTCTGTGGCTGCCGATATCATGTTTGGAGCATTAGTCCCGACAGGTGCT CTTCCGCTGGGGATTAATGCTTCGACAAAGACCTCTGCGGTAGTAATGCCATTTGATGCGCAAAGAGATCTGGAT GAGGTGGTCGAAGTCTGGGCCGCTGCTCTCCCGACCTACCTTATTCCCGCTGAAAGTTTGCGGTCTCTGATAGTA CGCCCGCATGGTCACCATTTCATCGCGCGTTTTGGATCGCAGCTAGTAGGCTTCTGTCTTGCTTATACAAATGCC CATAGTGCACCAAACACCGTGTATATCGCAGTTCTTGCCGTGTCGCCAAAGTACCAACATCAAGGCATTGGAATT GCCTTGCTAGACGAAACAAGAGCATACTTCCGGGCAACCTTTGGCTTCAATAATGTGAAGCTGGGCAGCTCATTC CCCCGCTTTTGGCCCGGGATACCCCAGGACCTTCCAGAAACAGTGCAACATTTCTTCACTCACCGTGGTTTCCGA CTCAGCCCTCCCAGTGCCCGGTCGGTTGATTTGTACCAAGATATTCGGAACTTCCAGTCGCCAGAGAAGTATATC ACTCGTGCCCGGGAGCGAGGCTTCCGCTTCGCGCCATTAAAACCCGAAGATTACGAGGCCTGTTTGGTTGGCCAA AGAAAAAACTTCTCTAAGGACAGTAGCTGGGTGGAGGCATACGTCGCTTTACATCCCGACAAGTATCCCGACAGT GTGATGATAGCATTCGACTCTCACGGCCAGCAGGTTGGTTGGACACTAATGCTCGGTCCATCATATGCTTTGAAC AAGTCTTGGGCATTCCCCCAAACCTGTGGTCCAAACACAGGGCTCATTGGTGCCGTAGGAATTGATGAATCACAC CGCAAGCATGGCATTGGACTGGCATTGATCTGTCATGCTATTGAAAACATGAAGCAGCGAGGCATTGAAGGTGTC TTTGTAGACTGGGTTGCGCTCGACGGGTGGTATGAGCAGGTTGGGTTCAAGACCTGGAGAAGCTACAGGCCCGGG GAGCTTTGA |
| Gene | >Pro_DTO377G3_2|g2769.t1 ATGGTTTCTTCAGATCTTAAAAAGCAGGTTGGCCAGGTATATGAGCTCTGAAACCCCTGTTTTGTGAATCTCACT GACGATCGCAGCTCTTCGCGGTGGGGTTCTATGGCTGCACCCCAAGTCCCGAAATCAAGATTTTGATTCATGACT ACCACGTTGGAGGTATCGTTCTCTTCTCGCGCAATTTTGAGAATTCAGAACAGCTCCAGGTGCGATATCCGAGGT TCCAAGTATCTTGACGCGTGACTAATCTTCTTCAGGCCTTGACACTAGCTTTACAGAATGAAGCCAGATTGGCTG GACATGAGCGACCATTATTGATCGGAATCGATCAGGAGAATGGGTTGGTCACTCGCATATCTCCGCCAATCGCTG CTCAAGTACCAGGCGCCATGGCACTCGGCGCCACGCATGACCCGGAGTGCGCCTACAGTGCGGGGAAAGCCACGG GGGAAACTTTGAGTTTCTTCGGGATTAACATGAACTATGCACCGGTGTGCGATATCAACTCGGAGCCCTTAAACC CAGTTGTTGGTGTACGCAGCTTTGGTGATGACCCTGAATTTGTGGGCCGGTTTGCGAGTGCGGCCGCGCGGGGTT TGCGGGAGCAAAACATCGTCCCTAGTGTGAAGCATTTTCCAGGTCATGGAGACACAGCTGTGGACTCGCATTATG GACTACCGGTGATTCCCAAAACAAGGGATCAGCTGGAGCGTTGCGAATTGATTCCATTTAGGCGGGCTGTCGCTG AAGGCATCGAGACCGTCATGACTGCTCATATCTCGCTGCCCTGTATCGATCTCACGCGGCCTGCAACACTTTCTC CGGATGTTATGGGGATTTTGCGCAAGGACATGGCCTATGATGGTATGATCATCACAGACTGCCTGGAGATGGATG GAATCCGCTCTACATACGGTACAGAAGAAGGCTCGGTCCTAGCGTTGCGCGCTGGCAGCGATAGCATCATGATCT GTCATACCTTTGATGTGCAGGTAGCATCGATCAAGGCAGTTTGTGAAGCAATAAAGTCCGGCAGAATCGAGCAGT CACGACTGGCGGACGCTTGTCGCCATGTTGCTACGGTGAAGGACAAGTATTTGAACTGGGATGTCGCTCTTCAAA AATCTAATCTCGCAGACTTGAACTCGCTCAACAATAGAATTGCCGAGACGACTATGGATATATATTCTCGATCGA CCACACTCGTTCGTGACAAAAATGGCATTCTCCCCCTATCAAAGACTTCAATCATCATCTTCCTCTTCCCTGGAG ATAATATCCCAGTCGGTGGTGCGGTTGACGGCGAAGGAACGGGGAGGCCAGGATTATATCAGTCTAACAGATATC TTGATGTCTTGCGGCAACACAACAATTCCATTGCGGAGCTCAGATACGGAGCGACCGGTTTGACTTCGGAGCAAT GGCGAACCCTTGAAGTCGCTGATGTGGTGATTTTCACTTCATTCAATGCAAGAGAGTCGCCATACCAGGAGTCAT TAGGCTTGGAACTCGCTGAACGTGTTCATGCATTGGTGCATATTGCTGTTTGCAACCCTTACGACTTCCTTGATG CTCCTAGTGTGAAGACCTATATTACCACATACGAGCCGACCATCGAGGCATTTTCTGTGGCTGCCGATATCATGT TTGGAGCATTAGTCCCGACAGGTGCTCTTCCGCTGGGGATTAATGCTTCGACAAAGACCTCTGCGGTAGTAATGC CATTTGATGCGCAAAGAGATCTGGATGAGGTGGTCGAAGTCTGGGCCGCTGCTCTCCCGACCTACCTTATTCCCG CTGAAAGTTTGCGGTCTCTGATAGTACGCCCGCATGGTCACCATTTCATCGCGCGTTTTGGATCGCAGCTAGTAG GCTTCTGTCTTGCTTATACAAATGCCCATAGTGCACCAAACACCGTGTATATCGCAGTTCTTGCCGTGTCGCCAA AGTACCAACATCAAGGCATTGGAATTGCCTTGCTAGACGAAACAAGAGCATACTTCCGGGCAACCTTTGGCTTCA ATAATGTGAAGCTGGGCAGCTCATTCCCCCGCTTTTGGCCCGGGATACCCCAGGACCTTCCAGAAACAGTGCAAC ATTTCTTCACTCACCGTGGTTTCCGACTCAGCCCTCCCAGTGCCCGGTCGGTTGATTTGTACCAAGATATTCGGA ACTTCCAGTCGCCAGAGAAGTATATCACTCGTGCCCGGGAGCGAGGCTTCCGCTTCGCGCCATTAAAACCCGAAG ATTACGAGGCCTGTTTGGTTGGCCAAAGAAAAAACTTCTCTAAGGACAGTGTAAGACTCCTGTGTTTCTCTCCAC TTGTACTTTGTTGGAATTCATACTAAAATTTTATCAAGAGCTGGGTGGAGGCATACGTCGCTTTACATCCCGACA AGTATCCCGACAGTGTGATGATAGCATTCGACTCTCACGGCCAGCAGGTTGGTTGGACACTAATGCTCGGTCCAT CATATGCTTTGAACAAGTCTTGGGCATTCCCCCAAACCTGTGGTCCAAACACAGGGCTCATTGGTGCCGTAGGAA TTGATGAATCACACCGCAAGCATGGCATTGGACTGGCATTGATCTGTCATGCTATTGAAAACATGAAGCAGCGAG GCATTGAAGGTGTCTTTGTAGACTGGGTTGCGCTCGACGGGTGGTATGAGCAGGTTGGGTTCAAGACCTGGAGAA GCTACAGGCCCGGGGAGCTTTGA |