Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g276.t1
Gene name
Locationscaffold_01:703435..704252
Strand+
Gene length (bp)817
Transcript length (bp)747
Coding sequence length (bp)747
Protein length (aa) 249

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10342 Kre9_KNH Kre9/KNH-like N-terminal Ig-like domain 2.7E-20 28 115

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g276.t1
MRFFISLAVAAMAAVAAANSKANPFSIPVEGYTFKVGEPTALKWEPTTDGTVSLILQWGAVISGNSGTVIASNID
NDGSYTWDVPSKLAAQPDYTIKIVSDDDSDDYNYIGRFTVEGSTVEVTSTSSTASSTTASTSTQSSTESSTSTTH
TTTSEKSTSTSSATTSSPTTLTTASSTATSTATSTSASSTESSAKSTSASASASGSASSSGAASSTPASQSAVPT
TNAGIANRVSGGMLALVAAALML*
Coding >Pro_DTO377G3_2|g276.t1
ATGCGCTTCTTCATCTCTCTCGCTGTCGCCGCCATGGCCGCCGTCGCCGCGGCGAACAGCAAGGCTAACCCCTTC
AGCATTCCCGTCGAGGGTTACACCTTCAAGGTCGGCGAGCCTACCGCTCTGAAGTGGGAGCCTACCACCGACGGC
ACTGTCAGTTTGATCTTGCAGTGGGGAGCCGTGATCAGCGGTAACTCCGGCACTGTCATTGCCTCGAATATCGAT
AACGACGGCAGCTACACATGGGATGTGCCCTCCAAGCTGGCCGCCCAGCCAGACTACACCATTAAGATCGTCTCG
GACGATGATAGCGACGACTACAACTACATCGGCCGTTTCACCGTCGAGGGCTCCACCGTCGAGGTCACCTCTACC
TCTTCCACTGCCAGCTCGACCACCGCGTCCACTTCCACTCAGTCATCCACCGAGTCATCTACCTCGACCACCCAC
ACCACTACCTCGGAGAAGTCGACCTCGACTTCTTCGGCCACCACCAGCTCCCCCACTACTTTGACCACCGCTTCC
AGCACTGCCACCAGCACTGCTACCAGCACCTCTGCCTCCTCCACCGAGTCCTCGGCGAAGTCCACCTCGGCCAGC
GCCAGCGCCAGCGGTAGCGCCAGCTCCTCGGGCGCTGCTAGCTCCACGCCCGCATCCCAGAGCGCCGTGCCCACC
ACCAACGCCGGCATCGCCAACCGTGTCTCCGGTGGCATGCTTGCCCTCGTTGCCGCTGCTCTGATGCTGTAG
Transcript >Pro_DTO377G3_2|g276.t1
ATGCGCTTCTTCATCTCTCTCGCTGTCGCCGCCATGGCCGCCGTCGCCGCGGCGAACAGCAAGGCTAACCCCTTC
AGCATTCCCGTCGAGGGTTACACCTTCAAGGTCGGCGAGCCTACCGCTCTGAAGTGGGAGCCTACCACCGACGGC
ACTGTCAGTTTGATCTTGCAGTGGGGAGCCGTGATCAGCGGTAACTCCGGCACTGTCATTGCCTCGAATATCGAT
AACGACGGCAGCTACACATGGGATGTGCCCTCCAAGCTGGCCGCCCAGCCAGACTACACCATTAAGATCGTCTCG
GACGATGATAGCGACGACTACAACTACATCGGCCGTTTCACCGTCGAGGGCTCCACCGTCGAGGTCACCTCTACC
TCTTCCACTGCCAGCTCGACCACCGCGTCCACTTCCACTCAGTCATCCACCGAGTCATCTACCTCGACCACCCAC
ACCACTACCTCGGAGAAGTCGACCTCGACTTCTTCGGCCACCACCAGCTCCCCCACTACTTTGACCACCGCTTCC
AGCACTGCCACCAGCACTGCTACCAGCACCTCTGCCTCCTCCACCGAGTCCTCGGCGAAGTCCACCTCGGCCAGC
GCCAGCGCCAGCGGTAGCGCCAGCTCCTCGGGCGCTGCTAGCTCCACGCCCGCATCCCAGAGCGCCGTGCCCACC
ACCAACGCCGGCATCGCCAACCGTGTCTCCGGTGGCATGCTTGCCCTCGTTGCCGCTGCTCTGATGCTGTAG
Gene >Pro_DTO377G3_2|g276.t1
ATGCGCTTCTTCATCTCTCTCGCTGTCGCCGCCATGGCCGCCGTCGCCGCGGCGAACAGCAAGGCTAACCCCTTC
AGCATTCCCGTCGAGGGTTACACCTTCAAGGTCGGCGAGCCTACCGCTCTGAAGTGGGAGCCTACCACCGACGGC
ACTGTCAGTTTGATCTTGCAGTGGGGAGCCGTGATCAGCGGTAACTCCGGCACTGTCATTGCCTGTAAGCAACCT
GGGGATCCATCCGAATGACTAATATTCCCCGATAAGGCACCGAGTCTGACTATCACCAGCGAATATCGATAACGA
CGGCAGCTACACATGGGATGTGCCCTCCAAGCTGGCCGCCCAGCCAGACTACACCATTAAGATCGTCTCGGACGA
TGATAGCGACGACTACAACTACATCGGCCGTTTCACCGTCGAGGGCTCCACCGTCGAGGTCACCTCTACCTCTTC
CACTGCCAGCTCGACCACCGCGTCCACTTCCACTCAGTCATCCACCGAGTCATCTACCTCGACCACCCACACCAC
TACCTCGGAGAAGTCGACCTCGACTTCTTCGGCCACCACCAGCTCCCCCACTACTTTGACCACCGCTTCCAGCAC
TGCCACCAGCACTGCTACCAGCACCTCTGCCTCCTCCACCGAGTCCTCGGCGAAGTCCACCTCGGCCAGCGCCAG
CGCCAGCGGTAGCGCCAGCTCCTCGGGCGCTGCTAGCTCCACGCCCGCATCCCAGAGCGCCGTGCCCACCACCAA
CGCCGGCATCGCCAACCGTGTCTCCGGTGGCATGCTTGCCCTCGTTGCCGCTGCTCTGATGCTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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