Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2725.t1
Gene name
Locationscaffold_03:787956..788809
Strand+
Gene length (bp)853
Transcript length (bp)759
Coding sequence length (bp)759
Protein length (aa) 253

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02798 GST_N Glutathione S-transferase, N-terminal domain 1.5E-13 5 83
PF13417 GST_N_3 Glutathione S-transferase, N-terminal domain 1.5E-12 8 86
PF13409 GST_N_2 Glutathione S-transferase, N-terminal domain 1.7E-10 18 84
PF00043 GST_C Glutathione S-transferase, C-terminal domain 4.3E-08 142 205
PF14497 GST_C_3 Glutathione S-transferase, C-terminal domain 7.8E-06 144 206
PF13410 GST_C_2 Glutathione S-transferase, C-terminal domain 1.3E-05 136 197

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0006749 glutathione metabolic process Yes
GO:0034641 cellular nitrogen compound metabolic process No
GO:0008150 biological_process No
GO:0005488 binding No
GO:0009987 cellular process No
GO:1901564 organonitrogen compound metabolic process No
GO:0044237 cellular metabolic process No
GO:0043603 cellular amide metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0008152 metabolic process No
GO:0006518 peptide metabolic process No
GO:0006790 sulfur compound metabolic process No
GO:0003674 molecular_function No
GO:0006575 cellular modified amino acid metabolic process No
GO:0071704 organic substance metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 35 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 58.00 31.25 84.76
5d_25C Five days - 25 degrees Celsius 59.25 31.97 86.52
7d_25C Seven days - 25 degrees Celsius 51.69 27.02 76.37
10d_25C Ten days - 25 degrees Celsius 65.55 36.19 94.91
7d_15C Seven days - 15 degrees Celsius 87.86 49.70 126.02
7d_30C Seven days - 30 degrees Celsius 42.42 20.87 63.98

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.959308 no
3d_25C 7d_25C 0.740730 no
3d_25C 7d_15C 0.089066 no
3d_25C 7d_30C 0.275260 no
3d_25C 10d_25C 0.718909 no
5d_25C 7d_25C 0.684996 no
5d_25C 7d_15C 0.115777 no
5d_25C 7d_30C 0.235261 no
5d_25C 10d_25C 0.771784 no
7d_25C 7d_15C 0.025858 yes
7d_25C 7d_30C 0.534889 no
7d_25C 10d_25C 0.416144 no
7d_15C 7d_30C 0.002297 yes
7d_15C 10d_25C 0.265560 no
7d_30C 10d_25C 0.100169 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2725.t1
MPEPTITLYTTQTPNGIKISIALEMLGLQYRVEKIDISRNVQKEDWFLKINPNGRIPALTDLFSDGKEIRLFESG
SILEYLAEQYDHDNKISFPRGTREYYAMKNWLFFQNAGLGPMQGQANHFTRYAPERIEYGVNRYVNECRRLYGVL
DKHLATCQSGWLVGDHVSIADISHWGWIAAAGWADIDIDEFPNVKAWEKLMASHPGTESGRHVPSPHTIKDLIQN
KAAVDKTAAEARSWIQQGMQAQAKGKV*
Coding >Pro_DTO377G3_2|g2725.t1
ATGCCAGAACCAACTATTACCCTCTACACAACCCAGACCCCCAATGGAATCAAAATATCCATAGCGCTAGAGATG
CTTGGCCTGCAATATAGGGTCGAGAAGATTGACATATCGAGGAACGTTCAAAAGGAAGACTGGTTTCTCAAAATC
AACCCCAATGGCCGCATCCCTGCCTTGACAGACCTCTTTAGCGATGGAAAGGAGATCCGGCTATTTGAGTCTGGT
AGCATTCTAGAATATCTGGCAGAGCAGTACGATCACGACAACAAGATCTCATTCCCCAGGGGCACGCGGGAATAC
TACGCTATGAAGAACTGGCTGTTCTTCCAGAATGCGGGCCTAGGACCTATGCAAGGCCAAGCCAACCACTTCACA
CGGTATGCGCCTGAGCGCATTGAGTACGGCGTGAACCGTTATGTCAACGAATGTCGCCGATTGTATGGTGTTTTA
GACAAACATCTTGCTACGTGTCAGTCTGGTTGGCTTGTCGGTGACCATGTCTCTATTGCCGATATCTCACACTGG
GGATGGATAGCTGCTGCGGGATGGGCTGATATCGATATTGACGAATTCCCGAATGTTAAGGCTTGGGAGAAGCTT
ATGGCTTCGCATCCAGGTACTGAGAGTGGTCGTCATGTCCCTTCTCCTCATACCATTAAAGATCTAATTCAGAAT
AAGGCAGCTGTGGATAAAACGGCTGCTGAAGCCAGGTCTTGGATTCAACAGGGGATGCAGGCCCAGGCTAAAGGC
AAAGTTTAA
Transcript >Pro_DTO377G3_2|g2725.t1
ATGCCAGAACCAACTATTACCCTCTACACAACCCAGACCCCCAATGGAATCAAAATATCCATAGCGCTAGAGATG
CTTGGCCTGCAATATAGGGTCGAGAAGATTGACATATCGAGGAACGTTCAAAAGGAAGACTGGTTTCTCAAAATC
AACCCCAATGGCCGCATCCCTGCCTTGACAGACCTCTTTAGCGATGGAAAGGAGATCCGGCTATTTGAGTCTGGT
AGCATTCTAGAATATCTGGCAGAGCAGTACGATCACGACAACAAGATCTCATTCCCCAGGGGCACGCGGGAATAC
TACGCTATGAAGAACTGGCTGTTCTTCCAGAATGCGGGCCTAGGACCTATGCAAGGCCAAGCCAACCACTTCACA
CGGTATGCGCCTGAGCGCATTGAGTACGGCGTGAACCGTTATGTCAACGAATGTCGCCGATTGTATGGTGTTTTA
GACAAACATCTTGCTACGTGTCAGTCTGGTTGGCTTGTCGGTGACCATGTCTCTATTGCCGATATCTCACACTGG
GGATGGATAGCTGCTGCGGGATGGGCTGATATCGATATTGACGAATTCCCGAATGTTAAGGCTTGGGAGAAGCTT
ATGGCTTCGCATCCAGGTACTGAGAGTGGTCGTCATGTCCCTTCTCCTCATACCATTAAAGATCTAATTCAGAAT
AAGGCAGCTGTGGATAAAACGGCTGCTGAAGCCAGGTCTTGGATTCAACAGGGGATGCAGGCCCAGGCTAAAGGC
AAAGTTTAA
Gene >Pro_DTO377G3_2|g2725.t1
ATGCCAGAACCAACTATTACCCTCTACACAACCCAGACCCCCAATGGAATCAAAATATCCATAGCGCTAGAGATG
CTTGGGTACAGTAGTTTCCTCGACCTTCTGACGCTTGGTACTAAGAGTGTAGCCTGCAATATAGGGTCGAGAAGA
TTGACATATCGAGGAACGTTCAAAAGGAAGAGTATGTCTTTACAAATACCCACACAAACAAAGCTAACTACCGTA
AAGCTGGTTTCTCAAAATCAACCCCAATGGCCGCATCCCTGCCTTGACAGACCTCTTTAGCGATGGAAAGGAGAT
CCGGCTATTTGAGTCTGGTAGCATTCTAGAATATCTGGCAGAGCAGTACGATCACGACAACAAGATCTCATTCCC
CAGGGGCACGCGGGAATACTACGCTATGAAGAACTGGCTGTTCTTCCAGAATGCGGGCCTAGGACCTATGCAAGG
CCAAGCCAACCACTTCACACGGTATGCGCCTGAGCGCATTGAGTACGGCGTGAACCGTTATGTCAACGAATGTCG
CCGATTGTATGGTGTTTTAGACAAACATCTTGCTACGTGTCAGTCTGGTTGGCTTGTCGGTGACCATGTCTCTAT
TGCCGATATCTCACACTGGGGATGGATAGCTGCTGCGGGATGGGCTGATATCGATATTGACGAATTCCCGAATGT
TAAGGCTTGGGAGAAGCTTATGGCTTCGCATCCAGGTACTGAGAGTGGTCGTCATGTCCCTTCTCCTCATACCAT
TAAAGATCTAATTCAGAATAAGGCAGCTGTGGATAAAACGGCTGCTGAAGCCAGGTCTTGGATTCAACAGGGGAT
GCAGGCCCAGGCTAAAGGCAAAGTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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