Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2707.t1
Gene name
Locationscaffold_03:736025..737151
Strand+
Gene length (bp)1126
Transcript length (bp)735
Coding sequence length (bp)735
Protein length (aa) 245

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03271 EB1 EB1-like C-terminal motif 2.2E-16 177 222
PF00307 CH Calponin homology (CH) domain 5.8E-06 3 100

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0008017 microtubule binding Yes
GO:0008092 cytoskeletal protein binding No
GO:0005488 binding No
GO:0015631 tubulin binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2707.t1
MGESRQELLAWLNNLLQLNLTKIEQCGTGAALCQVFDSIFMDVPMSRVKFNVNTEYAYLQNFKILQNVFARHQVN
KPIPVQSLTKCRMQDNLEFLQWVKKYWDQHYPGGEYDSVGRRKASGAVGAAPASRAPSASSARRGVTPTTGAVRP
RVAAPSGAATAALQQEISTQKEAIAGLEKERDFYFAKLRDIELLLQSAIEADPELEKEEDTLVKHIQGILYSTED
GFEIPAEGEEIPADELETF*
Coding >Pro_DTO377G3_2|g2707.t1
ATGGGTGAATCCAGACAGGAACTGCTCGCATGGCTTAATAACCTGCTGCAGCTGAACCTTACCAAGATTGAGCAA
TGTGGAACTGGTGCTGCCCTCTGCCAGGTCTTCGATTCGATTTTCATGGATGTTCCCATGTCCCGGGTCAAATTC
AACGTGAACACTGAATATGCCTACCTTCAGAATTTCAAGATTCTTCAGAACGTCTTCGCCCGACACCAGGTCAAC
AAGCCCATTCCCGTTCAGTCCCTCACGAAGTGCCGCATGCAGGACAACCTGGAGTTCCTCCAGTGGGTTAAGAAA
TACTGGGACCAGCACTATCCCGGTGGTGAATACGACTCCGTCGGCCGGCGTAAGGCTTCCGGCGCCGTTGGTGCC
GCCCCCGCTTCGCGCGCCCCGTCTGCAAGCAGCGCACGCCGTGGGGTGACCCCAACAACGGGCGCCGTCCGTCCC
CGAGTGGCCGCGCCCAGTGGAGCGGCCACCGCTGCCCTGCAACAGGAGATCTCCACACAGAAGGAAGCGATCGCA
GGACTAGAGAAGGAGCGCGACTTCTACTTCGCCAAGCTACGCGATATTGAGCTGCTGCTCCAGAGCGCCATTGAA
GCCGACCCGGAGCTTGAAAAGGAAGAAGACACGCTTGTTAAGCACATCCAGGGCATTCTATACTCGACCGAGGAC
GGTTTCGAGATCCCTGCCGAAGGAGAGGAGATTCCAGCCGACGAGCTCGAGACTTTCTAA
Transcript >Pro_DTO377G3_2|g2707.t1
ATGGGTGAATCCAGACAGGAACTGCTCGCATGGCTTAATAACCTGCTGCAGCTGAACCTTACCAAGATTGAGCAA
TGTGGAACTGGTGCTGCCCTCTGCCAGGTCTTCGATTCGATTTTCATGGATGTTCCCATGTCCCGGGTCAAATTC
AACGTGAACACTGAATATGCCTACCTTCAGAATTTCAAGATTCTTCAGAACGTCTTCGCCCGACACCAGGTCAAC
AAGCCCATTCCCGTTCAGTCCCTCACGAAGTGCCGCATGCAGGACAACCTGGAGTTCCTCCAGTGGGTTAAGAAA
TACTGGGACCAGCACTATCCCGGTGGTGAATACGACTCCGTCGGCCGGCGTAAGGCTTCCGGCGCCGTTGGTGCC
GCCCCCGCTTCGCGCGCCCCGTCTGCAAGCAGCGCACGCCGTGGGGTGACCCCAACAACGGGCGCCGTCCGTCCC
CGAGTGGCCGCGCCCAGTGGAGCGGCCACCGCTGCCCTGCAACAGGAGATCTCCACACAGAAGGAAGCGATCGCA
GGACTAGAGAAGGAGCGCGACTTCTACTTCGCCAAGCTACGCGATATTGAGCTGCTGCTCCAGAGCGCCATTGAA
GCCGACCCGGAGCTTGAAAAGGAAGAAGACACGCTTGTTAAGCACATCCAGGGCATTCTATACTCGACCGAGGAC
GGTTTCGAGATCCCTGCCGAAGGAGAGGAGATTCCAGCCGACGAGCTCGAGACTTTCTAA
Gene >Pro_DTO377G3_2|g2707.t1
ATGGGTGAATCCAGGTTCGACTTTTCTCCTATTCCCCGCCATCTCGCGACCGATATGGCCTTACTGACGCCGATC
GCTTTATGATTCAGACAGGAACTGCTCGCATGGCTTAATAACCTGCTGCAGCTGAACCTTACCAAGATTGAGCAA
TGTGGAACTGGGTATGGTTTGATCGAGATTCTCCCCGACTTTCAAAAGGCCCGCGGGGCGATCTCTTTTGTATGG
ATCAGCTGGGCTGACCTCCTATCTTCCTCTATAGTGCTGCCCTCTGCCAGGTCTTCGATTCGATTTTCAGTATGT
AATCAATACGACCGGCGCAATAGTCGAGAGAAACGGGCCCGTACTGAGTTGCGGGATACATACTGACTGGTTTCT
CTCTTTGTTCAGTGGATGTTCCCATGTCCCGGGTCAAATTCAACGTGAACACTGAATATGCCTACCTTCAGAATT
TCAAGATTCTTCAGAGTATGTGAAGGCGGATTCCAAATCGGCCAACGATCCCCCTTTTAACATATCCAATCATCC
AGACGTCTTCGCCCGACACCAGGTCAACAAGCCCATTCCCGTTCAGTCCCTCACGAAGTGCCGCATGCAGGACAA
CCTGGAGTTCCTCCAGTGGGTTAAGAAATACTGGGACCAGCACTATCCCGGTGGTGAATACGACTCCGTCGGCCG
GCGTAAGGCTTCCGGCGCCGTTGGTGCCGCCCCCGCTTCGCGCGCCCCGTCTGCAAGCAGCGCACGCCGTGGGGT
GACCCCAACAACGGGCGCCGTCCGTCCCCGAGTGGCCGCGCCCAGTGGAGCGGCCACCGCTGCCCTGCAACAGGA
GATCTCCACACAGAAGGAAGCGATCGCAGGACTAGAGAAGGAGCGCGACTTCTACTTCGCCAAGCTACGCGATAT
TGAGCTGCTGCTCCAGAGCGCCATTGAAGCCGACCCGGAGCTTGAAAAGGAAGAAGACACGCTTGTTAAGCACAT
CCAGGGCATTCTATACTCGACCGAGGTCCGTTCCCTTGACCTATTCCCTGAGGATTCCCCCAACTGACGCCTGTG
CGCCCCCCATTAGGACGGTTTCGAGATCCCTGCCGAAGGAGAGGAGATTCCAGCCGACGAGCTCGAGACTTTCTA
A

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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