Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2683.t1
Gene name
Locationscaffold_03:674211..675071
Strand-
Gene length (bp)860
Transcript length (bp)804
Coding sequence length (bp)804
Protein length (aa) 268

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 5.6E-27 6 201
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 2.0E-23 8 207
PF13460 NAD_binding_10 NAD(P)H-binding 1.8E-08 8 74
PF08659 KR KR domain 9.3E-08 2 90

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 14 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2683.t1
MASYAITGASKGIGLEYVRQLAANKDNTVLAIVRNPESQGISELATRHPNVHAIKGDVTDPKSILDAASAAAAIT
GGKLDVLIHNSNAVDMAAMGLNPSQIPFDAEATRKIFEPSLSTGVYGGLWATNAFLPLIEKGTQKKIVHISSAMA
DLDLIIKSGVSYAVAYSVSKAGMNVQVAKYAAELAPKGIKVLALSPGWVDTWEGEKPAELIQALAGMLSQFQAVE
PGLTGQIQPEESVRKGLQVIEKLDAESSGLFLSQNGNQTNWF*
Coding >Pro_DTO377G3_2|g2683.t1
ATGGCCTCATACGCAATCACCGGAGCCTCCAAGGGCATTGGCCTCGAATACGTGCGTCAACTCGCCGCCAACAAA
GACAACACAGTCCTGGCTATTGTGCGCAATCCCGAGTCGCAAGGAATTTCTGAGCTTGCCACCAGACATCCCAAT
GTCCATGCTATTAAGGGCGACGTCACAGACCCAAAGTCCATTCTCGATGCCGCTTCGGCCGCAGCTGCCATCACA
GGCGGGAAGCTTGATGTTCTCATCCACAACTCGAACGCCGTTGATATGGCTGCCATGGGCCTCAATCCGTCCCAA
ATTCCCTTCGATGCTGAAGCCACTCGGAAGATTTTTGAGCCATCGCTTAGCACAGGGGTTTATGGAGGTCTATGG
GCGACCAATGCCTTCCTTCCCCTGATCGAGAAGGGCACCCAGAAGAAGATTGTACATATCTCCAGCGCCATGGCG
GACTTGGATCTCATCATCAAGTCAGGAGTCAGCTACGCTGTCGCGTACTCCGTCTCGAAAGCTGGAATGAATGTG
CAAGTTGCCAAGTACGCAGCGGAGCTTGCGCCTAAAGGAATCAAGGTGCTTGCTTTGAGCCCTGGATGGGTTGAT
ACGTGGGAAGGCGAGAAACCGGCCGAATTAATTCAAGCGCTTGCCGGTATGCTGTCGCAGTTTCAGGCAGTGGAG
CCAGGACTCACGGGGCAAATCCAGCCCGAGGAAAGTGTTCGAAAGGGTCTTCAAGTAATTGAGAAGCTGGATGCT
GAATCTAGCGGCTTGTTCTTGAGTCAGAATGGAAACCAGACAAACTGGTTCTGA
Transcript >Pro_DTO377G3_2|g2683.t1
ATGGCCTCATACGCAATCACCGGAGCCTCCAAGGGCATTGGCCTCGAATACGTGCGTCAACTCGCCGCCAACAAA
GACAACACAGTCCTGGCTATTGTGCGCAATCCCGAGTCGCAAGGAATTTCTGAGCTTGCCACCAGACATCCCAAT
GTCCATGCTATTAAGGGCGACGTCACAGACCCAAAGTCCATTCTCGATGCCGCTTCGGCCGCAGCTGCCATCACA
GGCGGGAAGCTTGATGTTCTCATCCACAACTCGAACGCCGTTGATATGGCTGCCATGGGCCTCAATCCGTCCCAA
ATTCCCTTCGATGCTGAAGCCACTCGGAAGATTTTTGAGCCATCGCTTAGCACAGGGGTTTATGGAGGTCTATGG
GCGACCAATGCCTTCCTTCCCCTGATCGAGAAGGGCACCCAGAAGAAGATTGTACATATCTCCAGCGCCATGGCG
GACTTGGATCTCATCATCAAGTCAGGAGTCAGCTACGCTGTCGCGTACTCCGTCTCGAAAGCTGGAATGAATGTG
CAAGTTGCCAAGTACGCAGCGGAGCTTGCGCCTAAAGGAATCAAGGTGCTTGCTTTGAGCCCTGGATGGGTTGAT
ACGTGGGAAGGCGAGAAACCGGCCGAATTAATTCAAGCGCTTGCCGGTATGCTGTCGCAGTTTCAGGCAGTGGAG
CCAGGACTCACGGGGCAAATCCAGCCCGAGGAAAGTGTTCGAAAGGGTCTTCAAGTAATTGAGAAGCTGGATGCT
GAATCTAGCGGCTTGTTCTTGAGTCAGAATGGAAACCAGACAAACTGGTTCTGA
Gene >Pro_DTO377G3_2|g2683.t1
ATGGCCTCATACGCAATCACCGGAGCCTCCAAGGGCATTGGCCTCGAATACGTGCGTCAACTCGCCGCCAACAAA
GACAACACAGTCCTGGCTATTGTGCGCAATCCCGAGTCGCAAGGAATTTCTGAGCTTGCCACCAGACATCCCAAT
GTCCATGCTATTAAGGGCGACGTCACAGACCCAAAGTCCATTCTCGATGCCGCTTCGGCCGCAGCTGCCATCACA
GGCGGGAAGCTTGATGTTCTCATCCACAACTCGAACGCCGTTGATATGGCTGCCATGGGCCTCAATCCGTCCCAA
ATTCCCTTCGATGCTGAAGCCACTCGGAAGATTTTTGAGCCATCGCTTAGCACAGGGGTTTATGGAGGTCTATGG
GCGACCAATGCCTTCCTTCCCCTGATCGAGAAGGGCACCCAGAAGAAGATTGTACATATCTCCAGCGCCATGGCG
GACTTGGATCTCATCATCAAGTCAGGAGTCAGCTACGCTGTCGCGTACTCCGTCTCGAAAGCTGGAATGAATGTG
CAAGTTGCCAAGTACGCAGCGGAGCTTGCGCCTAAAGGAATCAAGGTGCTTGCTTTGAGCCCTGGATGGGTTGAT
ACGTGGGAAGGCGGTAAGGAGTCATATATGCCACTGCATTAGAGATAAAATCTAACAGCCTTGCAACAGAGAAAC
CGGCCGAATTAATTCAAGCGCTTGCCGGTATGCTGTCGCAGTTTCAGGCAGTGGAGCCAGGACTCACGGGGCAAA
TCCAGCCCGAGGAAAGTGTTCGAAAGGGTCTTCAAGTAATTGAGAAGCTGGATGCTGAATCTAGCGGCTTGTTCT
TGAGTCAGAATGGAAACCAGACAAACTGGTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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