Protein ID | Pro_DTO377G3_2|g2673.t1 |
Gene name | |
Location | scaffold_03:649777..650430 |
Strand | - |
Gene length (bp) | 653 |
Transcript length (bp) | 453 |
Coding sequence length (bp) | 453 |
Protein length (aa) | 151 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13639 | zf-RING_2 | Ring finger domain | 1.6E-10 | 90 | 131 |
PF13923 | zf-C3HC4_2 | Zinc finger, C3HC4 type (RING finger) | 2.7E-07 | 90 | 131 |
PF17123 | zf-RING_11 | RING-like zinc finger | 1.5E-07 | 90 | 117 |
PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | 5.2E-07 | 90 | 131 |
PF13445 | zf-RING_UBOX | RING-type zinc-finger | 9.0E-06 | 90 | 129 |
GO Term | Description | Terminal node |
---|---|---|
GO:0046872 | metal ion binding | Yes |
GO:0005488 | binding | No |
GO:0043167 | ion binding | No |
GO:0043169 | cation binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 13 | 35 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g2673.t1 MAEDAKLKKNHMAIVLGIGLGVVLLIALSLILTILINRRDRQSFLRSRKNPTERLRKLDKVSPTCTLEKWWATTK GNLGLSEAVDGQFVCAVCLEQVDRTQEIRDLRCLHVFHRECLEKWFLGDHFNCPLCHRAYYVADTPPRTDYLWMV * |
Coding | >Pro_DTO377G3_2|g2673.t1 ATGGCTGAAGACGCGAAACTGAAGAAGAACCATATGGCGATAGTCTTGGGCATCGGACTTGGAGTGGTGCTGCTT ATCGCACTTAGTTTGATTCTGACAATACTCATCAACCGCCGGGACAGGCAGTCATTCTTGAGATCAAGGAAAAAT CCTACTGAGCGGTTGCGCAAGTTGGACAAGGTCTCGCCAACTTGTACCCTCGAGAAGTGGTGGGCGACCACGAAG GGGAATCTCGGACTGTCCGAGGCCGTCGATGGACAGTTCGTTTGCGCCGTTTGTTTGGAGCAGGTAGACCGCACG CAGGAGATCCGCGACCTGCGGTGCTTGCACGTTTTTCACCGGGAATGCCTGGAGAAGTGGTTCTTGGGTGACCAT TTCAATTGCCCGCTGTGTCATCGCGCATACTATGTGGCAGACACACCTCCCCGCACAGATTATCTGTGGATGGTA TGA |
Transcript | >Pro_DTO377G3_2|g2673.t1 ATGGCTGAAGACGCGAAACTGAAGAAGAACCATATGGCGATAGTCTTGGGCATCGGACTTGGAGTGGTGCTGCTT ATCGCACTTAGTTTGATTCTGACAATACTCATCAACCGCCGGGACAGGCAGTCATTCTTGAGATCAAGGAAAAAT CCTACTGAGCGGTTGCGCAAGTTGGACAAGGTCTCGCCAACTTGTACCCTCGAGAAGTGGTGGGCGACCACGAAG GGGAATCTCGGACTGTCCGAGGCCGTCGATGGACAGTTCGTTTGCGCCGTTTGTTTGGAGCAGGTAGACCGCACG CAGGAGATCCGCGACCTGCGGTGCTTGCACGTTTTTCACCGGGAATGCCTGGAGAAGTGGTTCTTGGGTGACCAT TTCAATTGCCCGCTGTGTCATCGCGCATACTATGTGGCAGACACACCTCCCCGCACAGATTATCTGTGGATGGTA TGA |
Gene | >Pro_DTO377G3_2|g2673.t1 ATGGCTGAAGACGCGAAACTGAAGAAGAACCATATGGCGATAGTCTTGGGCATCGGACTTGGAGTGGTGCTGCTT ATCGCACTTAGTTTGATGTGAGTTAGATTCGATTTTTGCATCTTAGTGTATGCTATCTCTTGTGTCTCCTCCGTC CTTTCCCCATTCTCACCGATACATTTCCTCCGTCGGTTGTGACTTGTTACATAAACCATGCCACTCCATTCCACG CTAACCGTGTCATTCAGTCTGACAATACTCATCAACCGCCGGGACAGGCAGTCATTCTTGAGATCAAGGAAAAAT CCTACTGAGCGGTTGCGCAAGTTGGACAAGGTCTCGCCAACTTGTACCCTCGAGAAGTGGTGGGCGACCACGAAG GGGAATCTCGGACTGTCCGAGGCCGTCGATGGACAGTTCGTTTGGTATGTCTACCTTGCTTTGCCGGTAGAACAG TCGCTGACATTCTGTTCAGCGCCGTTTGTTTGGAGCAGGTAGACCGCACGCAGGAGATCCGCGACCTGCGGTGCT TGCACGTTTTTCACCGGGAATGCCTGGAGAAGTGGTTCTTGGGTGACCATTTCAATTGCCCGCTGTGTCATCGCG CATACTATGTGGCAGACACACCTCCCCGCACAGATTATCTGTGGATGGTATGA |