Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2673.t1
Gene name
Locationscaffold_03:649777..650430
Strand-
Gene length (bp)653
Transcript length (bp)453
Coding sequence length (bp)453
Protein length (aa) 151

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13639 zf-RING_2 Ring finger domain 1.6E-10 90 131
PF13923 zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 2.7E-07 90 131
PF17123 zf-RING_11 RING-like zinc finger 1.5E-07 90 117
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 5.2E-07 90 131
PF13445 zf-RING_UBOX RING-type zinc-finger 9.0E-06 90 129

GO

GO Term Description Terminal node
GO:0046872 metal ion binding Yes
GO:0005488 binding No
GO:0043167 ion binding No
GO:0043169 cation binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 12 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2673.t1
MAEDAKLKKNHMAIVLGIGLGVVLLIALSLILTILINRRDRQSFLRSRKNPTERLRKLDKVSPTCTLEKWWATTK
GNLGLSEAVDGQFVCAVCLEQVDRTQEIRDLRCLHVFHRECLEKWFLGDHFNCPLCHRAYYVADTPPRTDYLWMV
*
Coding >Pro_DTO377G3_2|g2673.t1
ATGGCTGAAGACGCGAAACTGAAGAAGAACCATATGGCGATAGTCTTGGGCATCGGACTTGGAGTGGTGCTGCTT
ATCGCACTTAGTTTGATTCTGACAATACTCATCAACCGCCGGGACAGGCAGTCATTCTTGAGATCAAGGAAAAAT
CCTACTGAGCGGTTGCGCAAGTTGGACAAGGTCTCGCCAACTTGTACCCTCGAGAAGTGGTGGGCGACCACGAAG
GGGAATCTCGGACTGTCCGAGGCCGTCGATGGACAGTTCGTTTGCGCCGTTTGTTTGGAGCAGGTAGACCGCACG
CAGGAGATCCGCGACCTGCGGTGCTTGCACGTTTTTCACCGGGAATGCCTGGAGAAGTGGTTCTTGGGTGACCAT
TTCAATTGCCCGCTGTGTCATCGCGCATACTATGTGGCAGACACACCTCCCCGCACAGATTATCTGTGGATGGTA
TGA
Transcript >Pro_DTO377G3_2|g2673.t1
ATGGCTGAAGACGCGAAACTGAAGAAGAACCATATGGCGATAGTCTTGGGCATCGGACTTGGAGTGGTGCTGCTT
ATCGCACTTAGTTTGATTCTGACAATACTCATCAACCGCCGGGACAGGCAGTCATTCTTGAGATCAAGGAAAAAT
CCTACTGAGCGGTTGCGCAAGTTGGACAAGGTCTCGCCAACTTGTACCCTCGAGAAGTGGTGGGCGACCACGAAG
GGGAATCTCGGACTGTCCGAGGCCGTCGATGGACAGTTCGTTTGCGCCGTTTGTTTGGAGCAGGTAGACCGCACG
CAGGAGATCCGCGACCTGCGGTGCTTGCACGTTTTTCACCGGGAATGCCTGGAGAAGTGGTTCTTGGGTGACCAT
TTCAATTGCCCGCTGTGTCATCGCGCATACTATGTGGCAGACACACCTCCCCGCACAGATTATCTGTGGATGGTA
TGA
Gene >Pro_DTO377G3_2|g2673.t1
ATGGCTGAAGACGCGAAACTGAAGAAGAACCATATGGCGATAGTCTTGGGCATCGGACTTGGAGTGGTGCTGCTT
ATCGCACTTAGTTTGATGTGAGTTAGATTCGATTTTTGCATCTTAGTGTATGCTATCTCTTGTGTCTCCTCCGTC
CTTTCCCCATTCTCACCGATACATTTCCTCCGTCGGTTGTGACTTGTTACATAAACCATGCCACTCCATTCCACG
CTAACCGTGTCATTCAGTCTGACAATACTCATCAACCGCCGGGACAGGCAGTCATTCTTGAGATCAAGGAAAAAT
CCTACTGAGCGGTTGCGCAAGTTGGACAAGGTCTCGCCAACTTGTACCCTCGAGAAGTGGTGGGCGACCACGAAG
GGGAATCTCGGACTGTCCGAGGCCGTCGATGGACAGTTCGTTTGGTATGTCTACCTTGCTTTGCCGGTAGAACAG
TCGCTGACATTCTGTTCAGCGCCGTTTGTTTGGAGCAGGTAGACCGCACGCAGGAGATCCGCGACCTGCGGTGCT
TGCACGTTTTTCACCGGGAATGCCTGGAGAAGTGGTTCTTGGGTGACCATTTCAATTGCCCGCTGTGTCATCGCG
CATACTATGTGGCAGACACACCTCCCCGCACAGATTATCTGTGGATGGTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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