Protein ID | Pro_DTO377G3_2|g2668.t1 |
Gene name | |
Location | scaffold_03:636987..639465 |
Strand | - |
Gene length (bp) | 2478 |
Transcript length (bp) | 2478 |
Coding sequence length (bp) | 2478 |
Protein length (aa) | 826 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 1.0E-06 | 178 | 238 |
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 4.5E-11 | 245 | 331 |
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 2.2E-07 | 386 | 481 |
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 7.9E-10 | 424 | 514 |
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 1.8E-07 | 457 | 545 |
PF13637 | Ank_4 | Ankyrin repeats (many copies) | 4.7E-05 | 243 | 287 |
PF13606 | Ank_3 | Ankyrin repeat | 3.4E-03 | 269 | 294 |
PF00023 | Ank | Ankyrin repeat | 2.0E-02 | 270 | 294 |
PF12937 | F-box-like | F-box-like | 1.3E-05 | 7 | 49 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g2668.t1 MPPSVSFSHLPVEVIYLIVDLLEPARYLNSLAQTCSRLYLLLTPMLYQNSTRSSHGFPIVWAAQHSSEGTIRQAF DAGASTYSCHYNFQQSLVAAVNNNHETIVRLILEQNEDPSIFTEKQSCKLCKGQKSEEAASKVLNPLYAAAVRGN VAIVRLLLAYKITFEHGCGERTPICSDIVFAAVNSGHLAVMQVLIEAGYAWDDKRRRYQDKTPLTVAVDQGDARM VEYLLDKGAKPSRDDKPLLESAAENGHLETVKLLLERGAEPQGSALSCAAGNGHVEVVEVLLDHGADPDPDMVRD CLSTLYYVAVSGQLQILDLLLARGVNIYPKDPKKKRYLLSSIIEDELWRSVERQKRSAFAVSFRALADFENMIDH GDDLAQAEILYIAIGYGWDDIVQRVLEQSFSADGIYQHCKLRYNRPILQAIQNGDIGITRLLVEHGANIQEYQGE SKDEGALSLAIQLGNVKIAELLIDHGADVNCISSRGETALAEATALASEDIFRMLLDRGADPTKTPLYTDENAVT RALYFGAVDAVQTLLERGIALEMPPLPEEQEKLTNHRGLYTPKNPKTLLEEAFLGGEQMAELVLDRGLLNIDPES YGAQEGLEHAVQLGMTGVVKQLLERGVDPKIPLLSGRQSLIVTAPYSPATDSRINATAILDMLLAHGADIDERRL PSITPLYRVILDVNSGNQQVRLLLERGADPFAVHACYRALVTEASDDNFNSILRVKRSMPSPDTWRPKKTFIFVP NMSELKDDPFLACMRRGDKAMLEAMLDAIDRKGLPLEELKDRLDRARMEATESGNLHLLPILQDYYWVKNIHARS * |
Coding | >Pro_DTO377G3_2|g2668.t1 ATGCCTCCCTCCGTGTCTTTCTCTCATCTTCCAGTCGAAGTCATCTACTTAATTGTTGATCTCCTCGAGCCAGCA CGTTACCTCAACTCGTTGGCGCAGACATGTTCGCGGCTATATCTGCTCTTGACCCCAATGCTCTATCAAAACAGC ACTCGTTCATCACACGGGTTCCCCATTGTATGGGCAGCACAGCATAGCTCCGAAGGGACCATTCGCCAAGCATTT GACGCTGGAGCTTCCACATATTCATGTCATTACAACTTTCAACAATCGCTCGTCGCGGCAGTGAACAACAACCAT GAGACCATCGTCCGACTGATACTGGAACAAAATGAAGACCCTAGTATATTCACAGAAAAGCAGAGCTGCAAGCTG TGCAAAGGCCAGAAATCCGAGGAGGCCGCCTCAAAAGTTCTCAATCCACTATATGCGGCGGCAGTGCGTGGCAAC GTGGCCATTGTCAGGCTTTTGCTTGCCTATAAGATCACTTTCGAACATGGTTGCGGAGAACGTACTCCGATATGC TCCGATATCGTATTTGCGGCAGTAAACAGCGGACACCTAGCCGTTATGCAAGTTCTCATCGAGGCTGGCTACGCC TGGGACGACAAAAGAAGAAGATACCAGGATAAGACACCACTCACTGTTGCAGTCGATCAGGGTGATGCAAGAATG GTTGAATACTTGCTGGACAAAGGGGCCAAACCCTCGCGTGATGATAAGCCACTTCTTGAGTCTGCCGCGGAAAAT GGACACCTTGAAACGGTCAAATTGCTCCTGGAACGCGGAGCAGAGCCTCAAGGAAGCGCTCTTTCCTGCGCGGCT GGCAATGGCCATGTGGAGGTCGTGGAAGTGCTCTTAGACCATGGGGCGGATCCCGATCCTGATATGGTTCGAGAT TGTCTGAGTACACTCTACTATGTAGCTGTAAGTGGTCAGCTACAAATCCTTGATCTTCTGTTGGCACGTGGGGTG AACATATACCCCAAGGACCCAAAGAAAAAACGCTACTTGTTATCATCCATAATCGAAGATGAACTCTGGCGATCA GTTGAGAGGCAGAAGCGGTCTGCTTTCGCTGTTTCCTTTCGAGCCCTCGCCGATTTTGAGAACATGATAGACCAC GGAGATGACCTAGCACAAGCTGAGATTCTGTACATAGCTATTGGCTATGGGTGGGATGATATTGTGCAGCGTGTT CTGGAGCAGAGCTTTTCCGCAGATGGAATATATCAGCACTGTAAGCTCCGGTATAACAGGCCTATACTCCAAGCC ATTCAGAACGGTGATATTGGAATTACCAGACTCTTGGTTGAGCATGGTGCCAATATACAGGAGTACCAGGGAGAA AGCAAGGATGAAGGCGCGCTATCCTTGGCAATCCAATTGGGCAATGTAAAAATTGCAGAGCTTTTGATCGACCAC GGGGCTGATGTAAATTGCATAAGCAGCCGCGGAGAAACTGCTTTGGCAGAGGCGACGGCATTGGCGTCCGAAGAC ATATTTCGCATGTTGCTTGATCGAGGAGCTGATCCGACGAAAACGCCATTATATACCGATGAAAACGCCGTCACC AGAGCATTGTACTTCGGTGCAGTGGATGCGGTACAGACCTTGCTTGAGAGAGGCATTGCATTGGAAATGCCTCCG TTGCCCGAGGAGCAAGAAAAGCTCACGAACCACCGAGGACTCTATACTCCAAAGAATCCCAAGACATTGCTAGAA GAGGCATTCTTGGGAGGAGAACAAATGGCGGAGCTGGTCTTAGACCGGGGATTGTTGAATATAGACCCTGAGAGC TATGGGGCGCAAGAAGGATTAGAGCACGCTGTCCAACTTGGAATGACTGGGGTGGTGAAGCAGCTACTTGAACGA GGAGTTGATCCTAAAATACCTTTACTATCCGGTCGCCAATCTTTGATAGTGACTGCACCATATTCTCCAGCCACT GACAGTAGAATTAATGCTACAGCCATTCTTGATATGCTCTTAGCCCATGGTGCTGATATCGATGAACGGCGGCTT CCTAGCATTACACCCTTATATCGGGTCATCTTGGATGTCAACTCCGGAAATCAGCAGGTGCGACTCTTGCTGGAG AGAGGCGCAGATCCCTTCGCGGTGCATGCTTGCTATCGCGCACTCGTTACAGAGGCAAGCGATGACAATTTCAAC TCAATACTCAGGGTCAAACGGTCAATGCCTAGTCCCGATACCTGGCGTCCCAAAAAAACGTTTATATTTGTGCCG AATATGAGCGAACTGAAAGATGACCCATTCCTTGCATGCATGAGACGGGGCGATAAAGCGATGCTTGAGGCCATG CTTGACGCGATTGATCGGAAAGGACTTCCCTTGGAGGAGTTGAAGGATAGACTTGATCGAGCTCGGATGGAAGCG ACTGAGAGTGGGAACCTGCACCTTCTACCCATTCTGCAGGATTATTACTGGGTAAAAAATATCCACGCAAGAAGC TGA |
Transcript | >Pro_DTO377G3_2|g2668.t1 ATGCCTCCCTCCGTGTCTTTCTCTCATCTTCCAGTCGAAGTCATCTACTTAATTGTTGATCTCCTCGAGCCAGCA CGTTACCTCAACTCGTTGGCGCAGACATGTTCGCGGCTATATCTGCTCTTGACCCCAATGCTCTATCAAAACAGC ACTCGTTCATCACACGGGTTCCCCATTGTATGGGCAGCACAGCATAGCTCCGAAGGGACCATTCGCCAAGCATTT GACGCTGGAGCTTCCACATATTCATGTCATTACAACTTTCAACAATCGCTCGTCGCGGCAGTGAACAACAACCAT GAGACCATCGTCCGACTGATACTGGAACAAAATGAAGACCCTAGTATATTCACAGAAAAGCAGAGCTGCAAGCTG TGCAAAGGCCAGAAATCCGAGGAGGCCGCCTCAAAAGTTCTCAATCCACTATATGCGGCGGCAGTGCGTGGCAAC GTGGCCATTGTCAGGCTTTTGCTTGCCTATAAGATCACTTTCGAACATGGTTGCGGAGAACGTACTCCGATATGC TCCGATATCGTATTTGCGGCAGTAAACAGCGGACACCTAGCCGTTATGCAAGTTCTCATCGAGGCTGGCTACGCC TGGGACGACAAAAGAAGAAGATACCAGGATAAGACACCACTCACTGTTGCAGTCGATCAGGGTGATGCAAGAATG GTTGAATACTTGCTGGACAAAGGGGCCAAACCCTCGCGTGATGATAAGCCACTTCTTGAGTCTGCCGCGGAAAAT GGACACCTTGAAACGGTCAAATTGCTCCTGGAACGCGGAGCAGAGCCTCAAGGAAGCGCTCTTTCCTGCGCGGCT GGCAATGGCCATGTGGAGGTCGTGGAAGTGCTCTTAGACCATGGGGCGGATCCCGATCCTGATATGGTTCGAGAT TGTCTGAGTACACTCTACTATGTAGCTGTAAGTGGTCAGCTACAAATCCTTGATCTTCTGTTGGCACGTGGGGTG AACATATACCCCAAGGACCCAAAGAAAAAACGCTACTTGTTATCATCCATAATCGAAGATGAACTCTGGCGATCA GTTGAGAGGCAGAAGCGGTCTGCTTTCGCTGTTTCCTTTCGAGCCCTCGCCGATTTTGAGAACATGATAGACCAC GGAGATGACCTAGCACAAGCTGAGATTCTGTACATAGCTATTGGCTATGGGTGGGATGATATTGTGCAGCGTGTT CTGGAGCAGAGCTTTTCCGCAGATGGAATATATCAGCACTGTAAGCTCCGGTATAACAGGCCTATACTCCAAGCC ATTCAGAACGGTGATATTGGAATTACCAGACTCTTGGTTGAGCATGGTGCCAATATACAGGAGTACCAGGGAGAA AGCAAGGATGAAGGCGCGCTATCCTTGGCAATCCAATTGGGCAATGTAAAAATTGCAGAGCTTTTGATCGACCAC GGGGCTGATGTAAATTGCATAAGCAGCCGCGGAGAAACTGCTTTGGCAGAGGCGACGGCATTGGCGTCCGAAGAC ATATTTCGCATGTTGCTTGATCGAGGAGCTGATCCGACGAAAACGCCATTATATACCGATGAAAACGCCGTCACC AGAGCATTGTACTTCGGTGCAGTGGATGCGGTACAGACCTTGCTTGAGAGAGGCATTGCATTGGAAATGCCTCCG TTGCCCGAGGAGCAAGAAAAGCTCACGAACCACCGAGGACTCTATACTCCAAAGAATCCCAAGACATTGCTAGAA GAGGCATTCTTGGGAGGAGAACAAATGGCGGAGCTGGTCTTAGACCGGGGATTGTTGAATATAGACCCTGAGAGC TATGGGGCGCAAGAAGGATTAGAGCACGCTGTCCAACTTGGAATGACTGGGGTGGTGAAGCAGCTACTTGAACGA GGAGTTGATCCTAAAATACCTTTACTATCCGGTCGCCAATCTTTGATAGTGACTGCACCATATTCTCCAGCCACT GACAGTAGAATTAATGCTACAGCCATTCTTGATATGCTCTTAGCCCATGGTGCTGATATCGATGAACGGCGGCTT CCTAGCATTACACCCTTATATCGGGTCATCTTGGATGTCAACTCCGGAAATCAGCAGGTGCGACTCTTGCTGGAG AGAGGCGCAGATCCCTTCGCGGTGCATGCTTGCTATCGCGCACTCGTTACAGAGGCAAGCGATGACAATTTCAAC TCAATACTCAGGGTCAAACGGTCAATGCCTAGTCCCGATACCTGGCGTCCCAAAAAAACGTTTATATTTGTGCCG AATATGAGCGAACTGAAAGATGACCCATTCCTTGCATGCATGAGACGGGGCGATAAAGCGATGCTTGAGGCCATG CTTGACGCGATTGATCGGAAAGGACTTCCCTTGGAGGAGTTGAAGGATAGACTTGATCGAGCTCGGATGGAAGCG ACTGAGAGTGGGAACCTGCACCTTCTACCCATTCTGCAGGATTATTACTGGGTAAAAAATATCCACGCAAGAAGC TGA |
Gene | >Pro_DTO377G3_2|g2668.t1 ATGCCTCCCTCCGTGTCTTTCTCTCATCTTCCAGTCGAAGTCATCTACTTAATTGTTGATCTCCTCGAGCCAGCA CGTTACCTCAACTCGTTGGCGCAGACATGTTCGCGGCTATATCTGCTCTTGACCCCAATGCTCTATCAAAACAGC ACTCGTTCATCACACGGGTTCCCCATTGTATGGGCAGCACAGCATAGCTCCGAAGGGACCATTCGCCAAGCATTT GACGCTGGAGCTTCCACATATTCATGTCATTACAACTTTCAACAATCGCTCGTCGCGGCAGTGAACAACAACCAT GAGACCATCGTCCGACTGATACTGGAACAAAATGAAGACCCTAGTATATTCACAGAAAAGCAGAGCTGCAAGCTG TGCAAAGGCCAGAAATCCGAGGAGGCCGCCTCAAAAGTTCTCAATCCACTATATGCGGCGGCAGTGCGTGGCAAC GTGGCCATTGTCAGGCTTTTGCTTGCCTATAAGATCACTTTCGAACATGGTTGCGGAGAACGTACTCCGATATGC TCCGATATCGTATTTGCGGCAGTAAACAGCGGACACCTAGCCGTTATGCAAGTTCTCATCGAGGCTGGCTACGCC TGGGACGACAAAAGAAGAAGATACCAGGATAAGACACCACTCACTGTTGCAGTCGATCAGGGTGATGCAAGAATG GTTGAATACTTGCTGGACAAAGGGGCCAAACCCTCGCGTGATGATAAGCCACTTCTTGAGTCTGCCGCGGAAAAT GGACACCTTGAAACGGTCAAATTGCTCCTGGAACGCGGAGCAGAGCCTCAAGGAAGCGCTCTTTCCTGCGCGGCT GGCAATGGCCATGTGGAGGTCGTGGAAGTGCTCTTAGACCATGGGGCGGATCCCGATCCTGATATGGTTCGAGAT TGTCTGAGTACACTCTACTATGTAGCTGTAAGTGGTCAGCTACAAATCCTTGATCTTCTGTTGGCACGTGGGGTG AACATATACCCCAAGGACCCAAAGAAAAAACGCTACTTGTTATCATCCATAATCGAAGATGAACTCTGGCGATCA GTTGAGAGGCAGAAGCGGTCTGCTTTCGCTGTTTCCTTTCGAGCCCTCGCCGATTTTGAGAACATGATAGACCAC GGAGATGACCTAGCACAAGCTGAGATTCTGTACATAGCTATTGGCTATGGGTGGGATGATATTGTGCAGCGTGTT CTGGAGCAGAGCTTTTCCGCAGATGGAATATATCAGCACTGTAAGCTCCGGTATAACAGGCCTATACTCCAAGCC ATTCAGAACGGTGATATTGGAATTACCAGACTCTTGGTTGAGCATGGTGCCAATATACAGGAGTACCAGGGAGAA AGCAAGGATGAAGGCGCGCTATCCTTGGCAATCCAATTGGGCAATGTAAAAATTGCAGAGCTTTTGATCGACCAC GGGGCTGATGTAAATTGCATAAGCAGCCGCGGAGAAACTGCTTTGGCAGAGGCGACGGCATTGGCGTCCGAAGAC ATATTTCGCATGTTGCTTGATCGAGGAGCTGATCCGACGAAAACGCCATTATATACCGATGAAAACGCCGTCACC AGAGCATTGTACTTCGGTGCAGTGGATGCGGTACAGACCTTGCTTGAGAGAGGCATTGCATTGGAAATGCCTCCG TTGCCCGAGGAGCAAGAAAAGCTCACGAACCACCGAGGACTCTATACTCCAAAGAATCCCAAGACATTGCTAGAA GAGGCATTCTTGGGAGGAGAACAAATGGCGGAGCTGGTCTTAGACCGGGGATTGTTGAATATAGACCCTGAGAGC TATGGGGCGCAAGAAGGATTAGAGCACGCTGTCCAACTTGGAATGACTGGGGTGGTGAAGCAGCTACTTGAACGA GGAGTTGATCCTAAAATACCTTTACTATCCGGTCGCCAATCTTTGATAGTGACTGCACCATATTCTCCAGCCACT GACAGTAGAATTAATGCTACAGCCATTCTTGATATGCTCTTAGCCCATGGTGCTGATATCGATGAACGGCGGCTT CCTAGCATTACACCCTTATATCGGGTCATCTTGGATGTCAACTCCGGAAATCAGCAGGTGCGACTCTTGCTGGAG AGAGGCGCAGATCCCTTCGCGGTGCATGCTTGCTATCGCGCACTCGTTACAGAGGCAAGCGATGACAATTTCAAC TCAATACTCAGGGTCAAACGGTCAATGCCTAGTCCCGATACCTGGCGTCCCAAAAAAACGTTTATATTTGTGCCG AATATGAGCGAACTGAAAGATGACCCATTCCTTGCATGCATGAGACGGGGCGATAAAGCGATGCTTGAGGCCATG CTTGACGCGATTGATCGGAAAGGACTTCCCTTGGAGGAGTTGAAGGATAGACTTGATCGAGCTCGGATGGAAGCG ACTGAGAGTGGGAACCTGCACCTTCTACCCATTCTGCAGGATTATTACTGGGTAAAAAATATCCACGCAAGAAGC TGA |