Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2654.t1
Gene name
Locationscaffold_03:597784..598750
Strand+
Gene length (bp)966
Transcript length (bp)894
Coding sequence length (bp)894
Protein length (aa) 298

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 6.1E-42 17 199
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 4.5E-30 21 203
PF08659 KR KR domain 7.0E-13 17 180
PF01370 Epimerase NAD dependent epimerase/dehydratase family 6.6E-06 17 190
PF04321 RmlD_sub_bind RmlD substrate binding domain 2.9E-05 17 117

GO

GO Term Description Terminal node
GO:0050662 coenzyme binding Yes
GO:0003824 catalytic activity Yes
GO:0005488 binding No
GO:0048037 cofactor binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2654.t1
MATEAPTFTKPNRPLVWLITGCSSGLGLALARAAQSNGHKVLATSRQPSRTPEIVSEITQNGGEWHTLDIDSPTA
ASELVSKLESTHKIDVLVNNAGYAILGAVEQFSDKELRAQMETVYFGPNRLIRAIVPGMRERRFGVVVNVSSGAG
VEGRESMGAYASAKAAMDGLCKALAKEVAPFNVRVLTVWLGAFNTQFGAGCRSPAEPLPVDYVGSVVAQTLDVLQ
TGNFVPDGDTDKAVRAMYEVIVGEGVGVGRESEWFLPLGRDMIPRLELARDRLVHTLDVFGDIARNVYVEKE*
Coding >Pro_DTO377G3_2|g2654.t1
ATGGCCACAGAAGCACCAACATTCACCAAACCCAACCGCCCGCTAGTCTGGCTTATAACCGGCTGCTCCTCGGGC
CTGGGCCTCGCACTGGCACGCGCCGCCCAATCAAACGGCCACAAAGTACTTGCAACATCACGACAACCCTCTCGC
ACCCCGGAGATAGTATCGGAGATAACCCAAAACGGGGGCGAATGGCACACACTAGACATTGACAGCCCAACCGCC
GCTTCTGAGCTGGTATCCAAGCTCGAGTCTACACACAAGATCGACGTGTTGGTCAACAACGCCGGATACGCGATC
CTCGGGGCAGTGGAACAGTTCTCGGACAAGGAGCTGCGGGCCCAGATGGAGACTGTGTATTTTGGACCAAATCGG
CTGATCAGAGCGATTGTGCCTGGGATGAGAGAAAGACGGTTTGGGGTTGTTGTTAATGTCAGCTCTGGGGCTGGA
GTGGAAGGGAGAGAGAGTATGGGTGCTTATGCGTCGGCGAAGGCTGCTATGGATGGTTTATGTAAAGCCCTCGCT
AAAGAAGTCGCGCCCTTTAACGTCCGTGTCCTGACGGTATGGCTGGGAGCGTTCAACACGCAGTTCGGGGCTGGT
TGTCGTTCCCCCGCTGAGCCTTTACCGGTCGACTATGTCGGCTCTGTGGTTGCGCAGACGCTGGATGTTTTACAG
ACTGGTAATTTTGTCCCTGATGGCGATACGGATAAGGCTGTGAGGGCGATGTATGAAGTCATCGTTGGTGAGGGC
GTGGGTGTTGGACGTGAGAGTGAGTGGTTCTTGCCTTTGGGTCGGGATATGATTCCTCGCCTTGAATTGGCGCGT
GATCGACTGGTTCATACACTTGATGTGTTTGGGGATATTGCTAGGAATGTCTATGTTGAGAAGGAATGA
Transcript >Pro_DTO377G3_2|g2654.t1
ATGGCCACAGAAGCACCAACATTCACCAAACCCAACCGCCCGCTAGTCTGGCTTATAACCGGCTGCTCCTCGGGC
CTGGGCCTCGCACTGGCACGCGCCGCCCAATCAAACGGCCACAAAGTACTTGCAACATCACGACAACCCTCTCGC
ACCCCGGAGATAGTATCGGAGATAACCCAAAACGGGGGCGAATGGCACACACTAGACATTGACAGCCCAACCGCC
GCTTCTGAGCTGGTATCCAAGCTCGAGTCTACACACAAGATCGACGTGTTGGTCAACAACGCCGGATACGCGATC
CTCGGGGCAGTGGAACAGTTCTCGGACAAGGAGCTGCGGGCCCAGATGGAGACTGTGTATTTTGGACCAAATCGG
CTGATCAGAGCGATTGTGCCTGGGATGAGAGAAAGACGGTTTGGGGTTGTTGTTAATGTCAGCTCTGGGGCTGGA
GTGGAAGGGAGAGAGAGTATGGGTGCTTATGCGTCGGCGAAGGCTGCTATGGATGGTTTATGTAAAGCCCTCGCT
AAAGAAGTCGCGCCCTTTAACGTCCGTGTCCTGACGGTATGGCTGGGAGCGTTCAACACGCAGTTCGGGGCTGGT
TGTCGTTCCCCCGCTGAGCCTTTACCGGTCGACTATGTCGGCTCTGTGGTTGCGCAGACGCTGGATGTTTTACAG
ACTGGTAATTTTGTCCCTGATGGCGATACGGATAAGGCTGTGAGGGCGATGTATGAAGTCATCGTTGGTGAGGGC
GTGGGTGTTGGACGTGAGAGTGAGTGGTTCTTGCCTTTGGGTCGGGATATGATTCCTCGCCTTGAATTGGCGCGT
GATCGACTGGTTCATACACTTGATGTGTTTGGGGATATTGCTAGGAATGTCTATGTTGAGAAGGAATGA
Gene >Pro_DTO377G3_2|g2654.t1
ATGGCCACAGAAGCACCAACATTCACCAAACCCAACCGCCCGCTAGTCTGGCTTATAACCGGCTGCTCCTCGGGC
CTGGGCCTCGCACTGGCACGCGCCGCCCAATCAAACGGCCACAAAGTACTTGCAACATCACGACAACCCTCTCGC
ACCCCGGAGATAGTATCGGAGATAACCCAAAACGGGGGCGAATGGCACACACTAGACATTGACAGCCCAACCGCC
GCTTCTGAGCTGGTATCCAAGCTCGAGTCTACACACAAGATCGACGTGTTGGTCAACAACGCCGGATACGCGATC
CTCGGGGCAGTGGAACAGTTCTCGGACAAGGAGCTGCGGGCCCAGATGGAGACTGTGTATTTTGGACCAAATCGG
CTGATCAGAGCGATTGTGCCTGGGATGAGAGAAAGACGGTTTGGGGTTGTTGTTAATGTCAGCTCTGGGGCTGGA
GTGGAAGGGAGAGAGAGTATGGGTGCTTATGCGTCGGCGAAGGCTGCTATGGATGGTACAGTTCTCCTTTTTCTC
TTTCTTCTGCCGAGGGATGTCTCGTTTATGTGTTGATGTGTATGTTCCGCAGGTTTATGTAAAGCCCTCGCTAAA
GAAGTCGCGCCCTTTAACGTCCGTGTCCTGACGGTATGGCTGGGAGCGTTCAACACGCAGTTCGGGGCTGGTTGT
CGTTCCCCCGCTGAGCCTTTACCGGTCGACTATGTCGGCTCTGTGGTTGCGCAGACGCTGGATGTTTTACAGACT
GGTAATTTTGTCCCTGATGGCGATACGGATAAGGCTGTGAGGGCGATGTATGAAGTCATCGTTGGTGAGGGCGTG
GGTGTTGGACGTGAGAGTGAGTGGTTCTTGCCTTTGGGTCGGGATATGATTCCTCGCCTTGAATTGGCGCGTGAT
CGACTGGTTCATACACTTGATGTGTTTGGGGATATTGCTAGGAATGTCTATGTTGAGAAGGAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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