Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2650.t1
Gene name
Locationscaffold_03:587978..588624
Strand+
Gene length (bp)646
Transcript length (bp)339
Coding sequence length (bp)339
Protein length (aa) 113

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10247 Romo1 Reactive mitochondrial oxygen species modulator 1 9.5E-28 18 83

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 39 0.5

Transmembrane Domains

Domain # Start End Length
1 25 47 22
2 59 81 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2650.t1
MPVVAGPPAQAGPGGAPSTLEKMKMGCLMGSTVGGIMGFIIGTVTIFQYGAGPNGVMRTLGKYMLGSGATFGLFM
SIGSVIRSEGPHNDAWLRARGPPMMLPRQSPLRPMRQ*
Coding >Pro_DTO377G3_2|g2650.t1
ATGCCTGTGGTTGCCGGACCTCCCGCTCAAGCGGGCCCAGGGGGTGCTCCCTCAACTTTGGAGAAGATGAAAATG
GGCTGCCTGATGGGTTCCACTGTTGGTGGTATCATGGGCTTCATTATTGGAACTGTGACGATCTTCCAATATGGC
GCTGGCCCCAACGGTGTTATGCGGACTCTCGGCAAGTATATGCTAGGTTCAGGCGCCACTTTCGGACTCTTCATG
TCCATCGGTAGCGTCATCCGCTCTGAAGGACCTCACAACGATGCCTGGCTTCGTGCTCGGGGCCCCCCAATGATG
CTCCCCCGACAGAGTCCCCTCCGGCCAATGCGCCAGTGA
Transcript >Pro_DTO377G3_2|g2650.t1
ATGCCTGTGGTTGCCGGACCTCCCGCTCAAGCGGGCCCAGGGGGTGCTCCCTCAACTTTGGAGAAGATGAAAATG
GGCTGCCTGATGGGTTCCACTGTTGGTGGTATCATGGGCTTCATTATTGGAACTGTGACGATCTTCCAATATGGC
GCTGGCCCCAACGGTGTTATGCGGACTCTCGGCAAGTATATGCTAGGTTCAGGCGCCACTTTCGGACTCTTCATG
TCCATCGGTAGCGTCATCCGCTCTGAAGGACCTCACAACGATGCCTGGCTTCGTGCTCGGGGCCCCCCAATGATG
CTCCCCCGACAGAGTCCCCTCCGGCCAATGCGCCAGTGA
Gene >Pro_DTO377G3_2|g2650.t1
ATGCCTGTGGTTGCCGGACCTCCCGCTCAAGCGGGCCCAGGGGGTGCTCCCTCAACTTTGGAGAAGAGTATGTCA
TCTACAACCTAGTGATATAGATCACCCTCCGCGTGGTGTCCTTTTTCCTTGGGTACTATATATATATGGTGAACC
AAGTATGCTGACATATTCCTAGTGAAAATGGGCTGCCTGATGGGTTCCAGTACGTGATCACAAAACAACCGAGCC
TTGTTCACCAAGAGCTTTTGCTAACATAGCTCCCCTTTCAGCTGTTGGTGGTATCATGGGCTTCATTATTGGTTG
GTCCCACTTAGTCCCCGAATGAAGGTGTGCATGATAAGCTAACTGAAACAGGAACTGTGACGATCTTCCAATATG
GCGCTGGCCCCAACGGTGTTATGCGGACTCTCGGCAAGTATATGCTAGGTTCAGGCGCCACTTTCGGGTATGGTT
GACTCCTTGAAAGCTTTGAAGTTATACTACTTTGGTTGAGAATCACTGGCTAATCAACTTCCCTTCAAATAGACT
CTTCATGTCCATCGGTAGCGTCATCCGCTCTGAAGGACCTCACAACGATGCCTGGCTTCGTGCTCGGGGCCCCCC
AATGATGCTCCCCCGACAGAGTCCCCTCCGGCCAATGCGCCAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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