Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2642.t1
Gene name
Locationscaffold_03:564807..565750
Strand+
Gene length (bp)943
Transcript length (bp)753
Coding sequence length (bp)753
Protein length (aa) 251

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06687 SUR7 SUR7/PalI family 5.1E-40 10 203

GO

GO Term Description Terminal node
GO:0005886 plasma membrane Yes
GO:0016020 membrane No
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 34 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 113 135 22
3 147 169 22
4 189 211 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2642.t1
MGFSRATLGFTGLFFMAGAILLIFLTLLGGVRNSNPLNQIYFLEADTGNIPGAASTSRWTFWNLCGVTNGRSDCG
ETHVDFPFDPPSHRNFNTTENIPHQFVGSKHYFLMSRFMFPFIIIGLFFAVCSFFTGMLAMCTRIASYLSGFLAW
IGLTFQVITTCLMTAVFVQGRHAFKSNGQDAHLGVKAFAFMWTASVCQFLSCLMYCLGGAVGRKDTSGGYSGRKE
RRRGFFSSQRSNSVKSQKKEGTSFA*
Coding >Pro_DTO377G3_2|g2642.t1
ATGGGTTTCAGCAGAGCAACATTGGGCTTTACGGGCCTGTTTTTCATGGCAGGAGCGATCTTGCTGATCTTCCTC
ACTCTGTTGGGAGGTGTACGCAACAGCAACCCGCTGAACCAAATCTACTTCCTCGAGGCAGACACGGGAAATATC
CCAGGCGCAGCATCGACCTCGCGATGGACATTCTGGAACCTCTGTGGAGTGACCAACGGCAGGAGTGACTGCGGA
GAGACCCATGTGGATTTCCCATTCGACCCCCCAAGCCATCGTAACTTTAATACGACCGAAAATATCCCTCATCAG
TTTGTCGGATCGAAGCACTACTTCTTGATGTCGCGCTTCATGTTCCCCTTCATCATCATCGGTCTGTTCTTCGCC
GTGTGCTCTTTCTTCACTGGTATGCTGGCCATGTGCACCCGCATTGCCAGCTACCTCTCCGGTTTCCTGGCCTGG
ATCGGTTTGACTTTCCAGGTCATCACGACCTGTCTCATGACTGCTGTTTTTGTCCAGGGCCGCCATGCGTTCAAG
AGTAACGGCCAGGACGCACACCTCGGTGTCAAGGCATTCGCCTTCATGTGGACCGCATCCGTTTGCCAGTTCCTT
TCATGCTTGATGTACTGCCTCGGTGGTGCCGTCGGCCGAAAAGATACCAGCGGTGGATACAGTGGACGCAAGGAG
CGCCGCCGTGGTTTCTTCTCCTCGCAGCGCTCAAACAGCGTGAAAAGCCAGAAGAAGGAGGGCACCAGCTTCGCT
TAA
Transcript >Pro_DTO377G3_2|g2642.t1
ATGGGTTTCAGCAGAGCAACATTGGGCTTTACGGGCCTGTTTTTCATGGCAGGAGCGATCTTGCTGATCTTCCTC
ACTCTGTTGGGAGGTGTACGCAACAGCAACCCGCTGAACCAAATCTACTTCCTCGAGGCAGACACGGGAAATATC
CCAGGCGCAGCATCGACCTCGCGATGGACATTCTGGAACCTCTGTGGAGTGACCAACGGCAGGAGTGACTGCGGA
GAGACCCATGTGGATTTCCCATTCGACCCCCCAAGCCATCGTAACTTTAATACGACCGAAAATATCCCTCATCAG
TTTGTCGGATCGAAGCACTACTTCTTGATGTCGCGCTTCATGTTCCCCTTCATCATCATCGGTCTGTTCTTCGCC
GTGTGCTCTTTCTTCACTGGTATGCTGGCCATGTGCACCCGCATTGCCAGCTACCTCTCCGGTTTCCTGGCCTGG
ATCGGTTTGACTTTCCAGGTCATCACGACCTGTCTCATGACTGCTGTTTTTGTCCAGGGCCGCCATGCGTTCAAG
AGTAACGGCCAGGACGCACACCTCGGTGTCAAGGCATTCGCCTTCATGTGGACCGCATCCGTTTGCCAGTTCCTT
TCATGCTTGATGTACTGCCTCGGTGGTGCCGTCGGCCGAAAAGATACCAGCGGTGGATACAGTGGACGCAAGGAG
CGCCGCCGTGGTTTCTTCTCCTCGCAGCGCTCAAACAGCGTGAAAAGCCAGAAGAAGGAGGGCACCAGCTTCGCT
TAA
Gene >Pro_DTO377G3_2|g2642.t1
ATGGGTTTCAGCAGTAAGTTGATTGACCCCTGATTAACAACTCTACAACACCTTGATCTGATCGTCGTCTCTAGG
AGCAACATTGGGCTTTACGGGCCTGTTTTTCATGGCAGGAGCGATCTTGCTGATCTTCCTCACTCTGTTGGGAGG
TGTACGCAACAGCAACCCGCTGAACCAAATCTACTTCCTCGAGGCAGACACGGGAAATATCCCAGGCGCAGCATC
GACCTCGCGATGGACATTCTGGAACCTCTGTGGAGTGACCAACGGCAGGAGTGACTGCGGAGAGACCCATGTGGA
TTTCCCATTCGACCCCCCAAGCCATCGTAACTTTAATACGACCGAAAATATCCCTCATCAGTTTGTCGGGTAGGT
TTCCAACTGATATATCCTAATTTACCGGGTCGCGCTAACCATACATACGCGCGCTATAGATCGAAGCACTACTTC
TTGATGTCGCGCTTCATGTTCCCCTTCATCATCATCGGTCTGTTCTTCGCCGTGTGCTCTTTCTTCACTGGTATG
CTGGCCATGTGCACCCGCATTGCCAGCTACCTCTCCGGTTTCCTGGCCTGGATCGGTTTGACTTTCCAGGTCATC
ACGACCTGTCTCATGACGTATGTATCACTATAATCGGAAATTAGTTTGTCCCAAAGACAAAATGCTAACTATATT
TCATAGTGCTGTTTTTGTCCAGGGCCGCCATGCGTTCAAGAGTAACGGCCAGGACGCACACCTCGGTGTCAAGGC
ATTCGCCTTCATGTGGACCGCATCCGTTTGCCAGTTCCTTTCATGCTTGATGTACTGCCTCGGTGGTGCCGTCGG
CCGAAAAGATACCAGCGGTGGATACAGTGGACGCAAGGAGCGCCGCCGTGGTTTCTTCTCCTCGCAGCGCTCAAA
CAGCGTGAAAAGCCAGAAGAAGGAGGGCACCAGCTTCGCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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