Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2635.t1
Gene name
Locationscaffold_03:550595..551507
Strand+
Gene length (bp)912
Transcript length (bp)819
Coding sequence length (bp)819
Protein length (aa) 273

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11712 Vma12 Endoplasmic reticulum-based factor for assembly of V-ATPase 6.8E-36 68 207

GO

GO Term Description Terminal node
GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly Yes
GO:0008150 biological_process No
GO:0043933 protein-containing complex organization No
GO:0009987 cellular process No
GO:0070070 proton-transporting V-type ATPase complex assembly No
GO:0016043 cellular component organization No
GO:0065003 protein-containing complex assembly No
GO:0070071 proton-transporting two-sector ATPase complex assembly No
GO:0071840 cellular component organization or biogenesis No
GO:0022607 cellular component assembly No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

Domain # Start End Length
1 141 163 22
2 178 200 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2635.t1
MVLLLTTDRILAAFEAIPASRHEELDLPTTLEAQGPIAHEQLIRLARYLQNDPEYKEQASHIPTVLSSLLRGTKV
YVPPPPKKPEPSAEYLASKARLIAATEQESYNRLLNPNYRPNADHADPHASPYTSDGRVEEDTLTVSLVSSVFIS
VVVTGFGVYAALTKFPTPEIVASEAVKVLLGLFSALSVAVAEAFLYWTYLEKVDRARVKERAVKERKVVIGPVGE
EDSADEAVEVGTEKEEIWGKGVNGGVRRRVREKWEKGRDGKKDVGSL*
Coding >Pro_DTO377G3_2|g2635.t1
ATGGTCCTCCTTCTTACGACAGATCGCATCCTCGCCGCGTTCGAAGCTATTCCAGCTTCGCGCCACGAGGAGCTA
GACTTGCCTACCACGCTGGAAGCACAAGGCCCAATAGCCCACGAACAACTGATCCGGCTCGCCAGATACCTCCAA
AACGACCCAGAATACAAAGAGCAGGCCTCTCACATCCCAACCGTCCTCAGTTCCCTCCTCCGCGGCACGAAAGTC
TACGTCCCTCCGCCGCCAAAGAAGCCAGAGCCTAGCGCCGAATACCTCGCATCAAAAGCACGCCTCATCGCAGCA
ACTGAACAAGAATCCTACAACCGACTCTTAAACCCAAACTACCGACCAAACGCTGACCACGCGGATCCGCACGCA
TCGCCCTACACGAGCGACGGCCGAGTAGAAGAAGATACGCTGACGGTCTCACTGGTTTCGAGTGTCTTCATCTCG
GTGGTGGTGACCGGGTTCGGCGTGTACGCGGCGCTCACGAAGTTCCCGACGCCGGAGATAGTGGCGAGCGAGGCG
GTTAAGGTTCTTCTCGGGTTGTTTTCGGCGCTGAGTGTTGCCGTTGCAGAGGCGTTCTTGTACTGGACATATCTT
GAAAAGGTGGATCGGGCGAGGGTTAAAGAGAGGGCGGTTAAGGAGAGGAAGGTTGTTATTGGGCCGGTTGGAGAG
GAGGATAGTGCGGATGAGGCTGTTGAGGTTGGGACGGAGAAGGAGGAAATTTGGGGGAAGGGGGTTAATGGGGGT
GTTAGGAGGAGGGTTAGGGAGAAGTGGGAGAAGGGGAGGGATGGGAAGAAGGATGTTGGGAGTCTTTGA
Transcript >Pro_DTO377G3_2|g2635.t1
ATGGTCCTCCTTCTTACGACAGATCGCATCCTCGCCGCGTTCGAAGCTATTCCAGCTTCGCGCCACGAGGAGCTA
GACTTGCCTACCACGCTGGAAGCACAAGGCCCAATAGCCCACGAACAACTGATCCGGCTCGCCAGATACCTCCAA
AACGACCCAGAATACAAAGAGCAGGCCTCTCACATCCCAACCGTCCTCAGTTCCCTCCTCCGCGGCACGAAAGTC
TACGTCCCTCCGCCGCCAAAGAAGCCAGAGCCTAGCGCCGAATACCTCGCATCAAAAGCACGCCTCATCGCAGCA
ACTGAACAAGAATCCTACAACCGACTCTTAAACCCAAACTACCGACCAAACGCTGACCACGCGGATCCGCACGCA
TCGCCCTACACGAGCGACGGCCGAGTAGAAGAAGATACGCTGACGGTCTCACTGGTTTCGAGTGTCTTCATCTCG
GTGGTGGTGACCGGGTTCGGCGTGTACGCGGCGCTCACGAAGTTCCCGACGCCGGAGATAGTGGCGAGCGAGGCG
GTTAAGGTTCTTCTCGGGTTGTTTTCGGCGCTGAGTGTTGCCGTTGCAGAGGCGTTCTTGTACTGGACATATCTT
GAAAAGGTGGATCGGGCGAGGGTTAAAGAGAGGGCGGTTAAGGAGAGGAAGGTTGTTATTGGGCCGGTTGGAGAG
GAGGATAGTGCGGATGAGGCTGTTGAGGTTGGGACGGAGAAGGAGGAAATTTGGGGGAAGGGGGTTAATGGGGGT
GTTAGGAGGAGGGTTAGGGAGAAGTGGGAGAAGGGGAGGGATGGGAAGAAGGATGTTGGGAGTCTTTGA
Gene >Pro_DTO377G3_2|g2635.t1
ATGGTCCTCCTTCTTACGACAGATCGCATCCTCGCCGCGTTCGAAGCTATTCCAGCTTCGCGCCACGAGGAGCTA
GACTTGCCTACCACGCTGGAAGCACAAGGCCCAATAGCCCACGAACAACTGATCCGGCTCGCCAGATACCTCCAA
AACGACCCAGAATACAAAGAGCAGGCCTCTCACATCCCAACCGTCCTCAGTTCCCTCCTCCGCGGCACGAAAGTC
TACGTCCCTCCGCCGCCAAAGAAGCCAGAGCCTGTACGTGGTCTATACACAACCCCATCCAATCCCTTCCTTTCC
TCCAATACACAAACCACACCAAACCAGATTCTAACATCCTACATAATACAGAGCGCCGAATACCTCGCATCAAAA
GCACGCCTCATCGCAGCAACTGAACAAGAATCCTACAACCGACTCTTAAACCCAAACTACCGACCAAACGCTGAC
CACGCGGATCCGCACGCATCGCCCTACACGAGCGACGGCCGAGTAGAAGAAGATACGCTGACGGTCTCACTGGTT
TCGAGTGTCTTCATCTCGGTGGTGGTGACCGGGTTCGGCGTGTACGCGGCGCTCACGAAGTTCCCGACGCCGGAG
ATAGTGGCGAGCGAGGCGGTTAAGGTTCTTCTCGGGTTGTTTTCGGCGCTGAGTGTTGCCGTTGCAGAGGCGTTC
TTGTACTGGACATATCTTGAAAAGGTGGATCGGGCGAGGGTTAAAGAGAGGGCGGTTAAGGAGAGGAAGGTTGTT
ATTGGGCCGGTTGGAGAGGAGGATAGTGCGGATGAGGCTGTTGAGGTTGGGACGGAGAAGGAGGAAATTTGGGGG
AAGGGGGTTAATGGGGGTGTTAGGAGGAGGGTTAGGGAGAAGTGGGAGAAGGGGAGGGATGGGAAGAAGGATGTT
GGGAGTCTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail