© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g2629.t1 |
| Gene name | |
| Location | scaffold_03:535438..537122 |
| Strand | + |
| Gene length (bp) | 1684 |
| Transcript length (bp) | 1632 |
| Coding sequence length (bp) | 1632 |
| Protein length (aa) | 544 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07156 | Prenylcys_lyase | Prenylcysteine lyase | 8.9E-99 | 153 | 533 |
| PF13450 | NAD_binding_8 | NAD(P)-binding Rossmann-like domain | 1.9E-12 | 46 | 112 |
| PF01593 | Amino_oxidase | Flavin containing amine oxidoreductase | 1.7E-11 | 56 | 353 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0016670 | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor | Yes |
| GO:0030328 | prenylcysteine catabolic process | Yes |
| GO:0009056 | catabolic process | No |
| GO:0006575 | cellular modified amino acid metabolic process | No |
| GO:1901565 | organonitrogen compound catabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | No |
| GO:0042219 | cellular modified amino acid catabolic process | No |
| GO:0030329 | prenylcysteine metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:1901575 | organic substance catabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0009987 | cellular process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 28 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g2629.t1 MWPSMPWHIPLLLYSILAALLVSFGNAAEQEQLREAASATPKRVAIIGAGAGGSFAAYQLRKLADEANIPVEITV YERESYVGGRSTTVNVFDDPSYPIELGASIFVQINYNLVNASRDLGLTVNSADHARPRETAESIGIWDGTQFVFT LTNSYSWWNIGRLFWRYGLAPLRTQNLVKSVVGRFLRLYEEPLFPFSSLTEAAIAADLINATASPGDVFLRANEI SSLFANEIIQASTRVNYGQNLQLIHGLESVVCMATDGAVSIEGGNWRIFDGALRASEVNIKVNTTATEISRNDDG TVRVSSKVNTATSSEHELFDEVVIAGPLQYSGISVSPPLENTPDEIPYVNLHVTLFASPHRISPKYFGLNDSNAR APETILTTLPKGVDLGSNPDGVGLTEFWSISTLRRVDHSVAGSKDKQQHYVYKIFSPERPTAEFIAQILGLESEI AGSNTTIGDLSIGDISWFHEKLWNPYPLLYPRVTFEETLLAPGVWYTGGIESFISTMETSALMGRNVATLMFQSW QKQGDQTDSDASSWDREL* |
| Coding | >Pro_DTO377G3_2|g2629.t1 ATGTGGCCGTCTATGCCATGGCATATCCCTCTCTTACTGTACTCCATCCTAGCTGCCCTACTCGTCTCGTTTGGC AATGCAGCAGAACAAGAGCAACTGCGAGAAGCCGCCAGTGCAACCCCAAAGCGTGTGGCAATAATCGGCGCCGGA GCCGGAGGCTCGTTTGCTGCATATCAACTGCGCAAGCTGGCAGATGAAGCCAACATTCCTGTGGAAATCACAGTC TATGAGCGTGAATCATATGTTGGCGGCCGCTCAACAACAGTCAATGTATTCGACGACCCATCGTACCCCATTGAA CTGGGTGCTTCCATTTTTGTCCAGATCAATTACAACCTGGTCAACGCTTCCCGTGATCTCGGCCTGACGGTCAAT AGTGCTGACCATGCACGGCCTAGGGAGACTGCTGAGAGTATCGGGATCTGGGATGGGACCCAGTTCGTTTTCACG TTGACGAATTCGTATAGCTGGTGGAATATCGGCCGGCTCTTCTGGCGTTATGGACTGGCGCCTCTGCGTACTCAG AATCTGGTAAAGAGTGTCGTTGGCAGGTTTCTCCGCCTTTATGAAGAGCCTTTATTCCCTTTCAGCTCTCTTACT GAGGCAGCTATTGCGGCTGACTTGATCAATGCTACTGCATCTCCTGGCGATGTGTTTCTCCGGGCAAATGAAATC AGCTCGCTGTTTGCGAATGAGATCATCCAAGCAAGTACTCGAGTGAATTATGGACAGAACCTGCAGCTGATTCAT GGCTTGGAATCTGTCGTCTGTATGGCTACGGATGGAGCGGTTTCTATCGAGGGTGGAAATTGGCGCATTTTCGAT GGCGCGCTGAGGGCCTCGGAGGTGAATATCAAAGTGAATACCACCGCCACTGAGATTTCACGCAACGATGATGGG ACTGTACGGGTCTCCTCAAAGGTCAACACCGCTACCAGCTCCGAGCATGAGCTATTCGACGAAGTTGTCATTGCC GGTCCTTTGCAGTACTCGGGTATCTCCGTCTCCCCTCCCTTGGAAAACACTCCAGATGAGATTCCATATGTCAAC TTGCACGTTACTCTCTTTGCATCCCCTCACCGCATCTCGCCGAAGTATTTTGGTCTGAACGATTCAAATGCTCGA GCGCCCGAGACTATTCTGACCACTCTACCCAAGGGCGTTGATCTGGGTTCGAACCCAGATGGTGTTGGCCTCACT GAATTTTGGAGTATTAGTACACTTCGAAGAGTAGATCATTCTGTTGCGGGTTCCAAAGACAAACAGCAACATTAT GTTTACAAAATCTTCTCGCCAGAGCGGCCCACGGCTGAATTCATTGCCCAGATTCTGGGGCTGGAGAGTGAGATT GCGGGGAGCAATACGACCATTGGAGACCTATCGATAGGCGATATCAGCTGGTTCCATGAGAAGCTATGGAACCCA TACCCTCTTCTGTATCCGCGAGTGACCTTTGAGGAGACTCTTCTAGCTCCAGGTGTGTGGTACACAGGTGGCATC GAGAGCTTCATCTCGACAATGGAGACTAGTGCGTTGATGGGCCGGAACGTGGCAACTCTCATGTTCCAGTCGTGG CAGAAGCAAGGAGATCAGACAGACAGTGATGCCTCGTCCTGGGACAGGGAGCTGTAA |
| Transcript | >Pro_DTO377G3_2|g2629.t1 ATGTGGCCGTCTATGCCATGGCATATCCCTCTCTTACTGTACTCCATCCTAGCTGCCCTACTCGTCTCGTTTGGC AATGCAGCAGAACAAGAGCAACTGCGAGAAGCCGCCAGTGCAACCCCAAAGCGTGTGGCAATAATCGGCGCCGGA GCCGGAGGCTCGTTTGCTGCATATCAACTGCGCAAGCTGGCAGATGAAGCCAACATTCCTGTGGAAATCACAGTC TATGAGCGTGAATCATATGTTGGCGGCCGCTCAACAACAGTCAATGTATTCGACGACCCATCGTACCCCATTGAA CTGGGTGCTTCCATTTTTGTCCAGATCAATTACAACCTGGTCAACGCTTCCCGTGATCTCGGCCTGACGGTCAAT AGTGCTGACCATGCACGGCCTAGGGAGACTGCTGAGAGTATCGGGATCTGGGATGGGACCCAGTTCGTTTTCACG TTGACGAATTCGTATAGCTGGTGGAATATCGGCCGGCTCTTCTGGCGTTATGGACTGGCGCCTCTGCGTACTCAG AATCTGGTAAAGAGTGTCGTTGGCAGGTTTCTCCGCCTTTATGAAGAGCCTTTATTCCCTTTCAGCTCTCTTACT GAGGCAGCTATTGCGGCTGACTTGATCAATGCTACTGCATCTCCTGGCGATGTGTTTCTCCGGGCAAATGAAATC AGCTCGCTGTTTGCGAATGAGATCATCCAAGCAAGTACTCGAGTGAATTATGGACAGAACCTGCAGCTGATTCAT GGCTTGGAATCTGTCGTCTGTATGGCTACGGATGGAGCGGTTTCTATCGAGGGTGGAAATTGGCGCATTTTCGAT GGCGCGCTGAGGGCCTCGGAGGTGAATATCAAAGTGAATACCACCGCCACTGAGATTTCACGCAACGATGATGGG ACTGTACGGGTCTCCTCAAAGGTCAACACCGCTACCAGCTCCGAGCATGAGCTATTCGACGAAGTTGTCATTGCC GGTCCTTTGCAGTACTCGGGTATCTCCGTCTCCCCTCCCTTGGAAAACACTCCAGATGAGATTCCATATGTCAAC TTGCACGTTACTCTCTTTGCATCCCCTCACCGCATCTCGCCGAAGTATTTTGGTCTGAACGATTCAAATGCTCGA GCGCCCGAGACTATTCTGACCACTCTACCCAAGGGCGTTGATCTGGGTTCGAACCCAGATGGTGTTGGCCTCACT GAATTTTGGAGTATTAGTACACTTCGAAGAGTAGATCATTCTGTTGCGGGTTCCAAAGACAAACAGCAACATTAT GTTTACAAAATCTTCTCGCCAGAGCGGCCCACGGCTGAATTCATTGCCCAGATTCTGGGGCTGGAGAGTGAGATT GCGGGGAGCAATACGACCATTGGAGACCTATCGATAGGCGATATCAGCTGGTTCCATGAGAAGCTATGGAACCCA TACCCTCTTCTGTATCCGCGAGTGACCTTTGAGGAGACTCTTCTAGCTCCAGGTGTGTGGTACACAGGTGGCATC GAGAGCTTCATCTCGACAATGGAGACTAGTGCGTTGATGGGCCGGAACGTGGCAACTCTCATGTTCCAGTCGTGG CAGAAGCAAGGAGATCAGACAGACAGTGATGCCTCGTCCTGGGACAGGGAGCTGTAA |
| Gene | >Pro_DTO377G3_2|g2629.t1 ATGTGGCCGTCTATGCCATGGCATATCCCTCTCTTACTGTACTCCATCCTAGCTGCCCTACTCGTCTCGTTTGGC AATGCAGCAGAACAAGAGCAACTGCGAGAAGCCGCCAGTGCAACCCCAAAGCGTGTGGCAATAATCGGTATGCCT CTCTCTAAAGAACACAGTTCCATACGGGGCTGATACTCCCATAGGCGCCGGAGCCGGAGGCTCGTTTGCTGCATA TCAACTGCGCAAGCTGGCAGATGAAGCCAACATTCCTGTGGAAATCACAGTCTATGAGCGTGAATCATATGTTGG CGGCCGCTCAACAACAGTCAATGTATTCGACGACCCATCGTACCCCATTGAACTGGGTGCTTCCATTTTTGTCCA GATCAATTACAACCTGGTCAACGCTTCCCGTGATCTCGGCCTGACGGTCAATAGTGCTGACCATGCACGGCCTAG GGAGACTGCTGAGAGTATCGGGATCTGGGATGGGACCCAGTTCGTTTTCACGTTGACGAATTCGTATAGCTGGTG GAATATCGGCCGGCTCTTCTGGCGTTATGGACTGGCGCCTCTGCGTACTCAGAATCTGGTAAAGAGTGTCGTTGG CAGGTTTCTCCGCCTTTATGAAGAGCCTTTATTCCCTTTCAGCTCTCTTACTGAGGCAGCTATTGCGGCTGACTT GATCAATGCTACTGCATCTCCTGGCGATGTGTTTCTCCGGGCAAATGAAATCAGCTCGCTGTTTGCGAATGAGAT CATCCAAGCAAGTACTCGAGTGAATTATGGACAGAACCTGCAGCTGATTCATGGCTTGGAATCTGTCGTCTGTAT GGCTACGGATGGAGCGGTTTCTATCGAGGGTGGAAATTGGCGCATTTTCGATGGCGCGCTGAGGGCCTCGGAGGT GAATATCAAAGTGAATACCACCGCCACTGAGATTTCACGCAACGATGATGGGACTGTACGGGTCTCCTCAAAGGT CAACACCGCTACCAGCTCCGAGCATGAGCTATTCGACGAAGTTGTCATTGCCGGTCCTTTGCAGTACTCGGGTAT CTCCGTCTCCCCTCCCTTGGAAAACACTCCAGATGAGATTCCATATGTCAACTTGCACGTTACTCTCTTTGCATC CCCTCACCGCATCTCGCCGAAGTATTTTGGTCTGAACGATTCAAATGCTCGAGCGCCCGAGACTATTCTGACCAC TCTACCCAAGGGCGTTGATCTGGGTTCGAACCCAGATGGTGTTGGCCTCACTGAATTTTGGAGTATTAGTACACT TCGAAGAGTAGATCATTCTGTTGCGGGTTCCAAAGACAAACAGCAACATTATGTTTACAAAATCTTCTCGCCAGA GCGGCCCACGGCTGAATTCATTGCCCAGATTCTGGGGCTGGAGAGTGAGATTGCGGGGAGCAATACGACCATTGG AGACCTATCGATAGGCGATATCAGCTGGTTCCATGAGAAGCTATGGAACCCATACCCTCTTCTGTATCCGCGAGT GACCTTTGAGGAGACTCTTCTAGCTCCAGGTGTGTGGTACACAGGTGGCATCGAGAGCTTCATCTCGACAATGGA GACTAGTGCGTTGATGGGCCGGAACGTGGCAACTCTCATGTTCCAGTCGTGGCAGAAGCAAGGAGATCAGACAGA CAGTGATGCCTCGTCCTGGGACAGGGAGCTGTAA |