Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2623.t1
Gene name
Locationscaffold_03:518235..519773
Strand+
Gene length (bp)1538
Transcript length (bp)1302
Coding sequence length (bp)1302
Protein length (aa) 434

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00004 AAA ATPase family associated with various cellular activities (AAA) 3.8E-42 167 295
PF09336 Vps4_C Vps4 C terminal oligomerisation domain 5.0E-29 370 429
PF04212 MIT MIT (microtubule interacting and transport) domain 2.0E-23 7 72
PF05496 RuvB_N Holliday junction DNA helicase RuvB P-loop domain 2.2E-05 162 236
PF07728 AAA_5 AAA domain (dynein-related subfamily) 1.2E-04 167 233

GO

GO Term Description Terminal node
GO:0006310 DNA recombination Yes
GO:0005524 ATP binding Yes
GO:0016887 ATPase activity Yes
GO:0006281 DNA repair Yes
GO:0009378 four-way junction helicase activity Yes
GO:0006139 nucleobase-containing compound metabolic process No
GO:0017111 nucleoside-triphosphatase activity No
GO:0009987 cellular process No
GO:0043170 macromolecule metabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0043168 anion binding No
GO:0004386 helicase activity No
GO:0032559 adenyl ribonucleotide binding No
GO:0044238 primary metabolic process No
GO:0003824 catalytic activity No
GO:0006950 response to stress No
GO:0033554 cellular response to stress No
GO:0044260 cellular macromolecule metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0032553 ribonucleotide binding No
GO:0071704 organic substance metabolic process No
GO:0016462 pyrophosphatase activity No
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides No
GO:0097159 organic cyclic compound binding No
GO:0032555 purine ribonucleotide binding No
GO:1901363 heterocyclic compound binding No
GO:0090304 nucleic acid metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0003674 molecular_function No
GO:0036094 small molecule binding No
GO:0003678 DNA helicase activity No
GO:0044237 cellular metabolic process No
GO:0016817 hydrolase activity, acting on acid anhydrides No
GO:0050896 response to stimulus No
GO:0005488 binding No
GO:0006259 DNA metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0043167 ion binding No
GO:0006807 nitrogen compound metabolic process No
GO:0006974 cellular response to DNA damage stimulus No
GO:0000166 nucleotide binding No
GO:0008144 drug binding No
GO:0051716 cellular response to stimulus No
GO:0008150 biological_process No
GO:0140097 catalytic activity, acting on DNA No
GO:0016787 hydrolase activity No
GO:0008152 metabolic process No
GO:0030554 adenyl nucleotide binding No
GO:0097367 carbohydrate derivative binding No
GO:0017076 purine nucleotide binding No
GO:1901265 nucleoside phosphate binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 48 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2623.t1
MSNTDFLGRAIDTVKKAIENDNDGEYEKAYQMYYSALELFMLALKWEKNPKSKEMIRSKAGEYMDRAEKLKNHLA
EDRKKPSAVGANGKVAQGSGKGGKEDDDNGEDADAKKLRSALQGAILSEKPNVKWEDVAGLENAKEALKEAVILP
IKFPHLFTGKRQPWKGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESERLVKQLFNMARENKPA
IIFIDEVDALCGPRGEGESEASRRIKTELLVQMDGVGKDSKGVLILGATNIPWQLDAAIRRRFQRRIHISLPDFN
ARMKMFMLAVGSTPCQMTQTDYRQLADLSEGYSGSDISICVQDALMQPIRKIQGATHYKKVLDEGVEKVTPCSPG
DEGAVEMSWLDIDADKLLEPPLALKDFVKAVKNSRPTVSGEDLTRNAEWTQEFGSEGA*
Coding >Pro_DTO377G3_2|g2623.t1
ATGAGTAATACAGATTTCCTGGGACGGGCGATTGATACGGTCAAGAAGGCGATCGAGAATGACAACGATGGCGAG
TACGAAAAGGCTTATCAGATGTACTACTCCGCATTGGAGTTGTTCATGCTGGCCCTGAAATGGGAGAAGAACCCG
AAATCGAAGGAAATGATCCGCTCAAAGGCCGGCGAATATATGGATCGCGCGGAGAAGCTTAAGAACCACCTCGCT
GAGGACCGGAAAAAACCGAGTGCGGTTGGCGCAAATGGAAAGGTGGCGCAAGGCAGTGGGAAGGGAGGGAAGGAA
GATGACGACAACGGCGAAGATGCGGATGCGAAAAAGCTTCGATCGGCGCTTCAAGGAGCTATTCTGTCGGAGAAG
CCGAACGTCAAGTGGGAAGATGTTGCTGGCCTGGAGAACGCAAAGGAAGCATTGAAGGAAGCAGTCATTCTACCC
ATCAAGTTCCCTCATTTGTTCACTGGCAAGCGCCAACCCTGGAAGGGTATCTTGCTCTACGGTCCTCCAGGCACG
GGAAAATCTTATCTTGCCAAAGCCGTGGCAACTGAGGCAAACAGCACATTCTTCAGTGTCAGCAGTAGTGACCTG
GTCTCGAAGTGGATGGGTGAGAGTGAAAGACTTGTGAAACAGTTGTTTAACATGGCCCGTGAGAATAAGCCCGCG
ATTATCTTCATCGACGAGGTCGATGCGCTGTGCGGACCCCGTGGCGAAGGAGAGTCCGAGGCCTCACGGCGTATC
AAGACCGAATTGCTTGTACAGATGGACGGTGTCGGCAAAGACTCGAAGGGCGTTTTGATTTTGGGCGCAACCAAT
ATCCCTTGGCAACTGGATGCTGCTATTCGGCGACGATTCCAGCGAAGAATACACATCAGTCTTCCCGACTTCAAT
GCACGAATGAAGATGTTCATGCTAGCCGTGGGCTCGACGCCGTGTCAAATGACCCAGACCGACTATCGCCAATTG
GCCGATCTGAGCGAAGGCTACTCCGGTAGCGATATTAGTATTTGCGTGCAGGATGCACTAATGCAGCCAATCCGC
AAGATTCAAGGAGCAACACATTATAAGAAGGTACTCGATGAGGGTGTAGAGAAAGTCACGCCTTGCTCACCAGGG
GATGAGGGCGCAGTGGAAATGAGCTGGCTCGATATCGATGCAGATAAGCTTTTGGAGCCACCTCTCGCTCTGAAG
GATTTCGTCAAGGCAGTCAAGAACTCCCGGCCAACCGTTAGCGGAGAGGATCTCACGAGGAACGCTGAATGGACC
CAAGAATTCGGTAGTGAAGGTGCCTGA
Transcript >Pro_DTO377G3_2|g2623.t1
ATGAGTAATACAGATTTCCTGGGACGGGCGATTGATACGGTCAAGAAGGCGATCGAGAATGACAACGATGGCGAG
TACGAAAAGGCTTATCAGATGTACTACTCCGCATTGGAGTTGTTCATGCTGGCCCTGAAATGGGAGAAGAACCCG
AAATCGAAGGAAATGATCCGCTCAAAGGCCGGCGAATATATGGATCGCGCGGAGAAGCTTAAGAACCACCTCGCT
GAGGACCGGAAAAAACCGAGTGCGGTTGGCGCAAATGGAAAGGTGGCGCAAGGCAGTGGGAAGGGAGGGAAGGAA
GATGACGACAACGGCGAAGATGCGGATGCGAAAAAGCTTCGATCGGCGCTTCAAGGAGCTATTCTGTCGGAGAAG
CCGAACGTCAAGTGGGAAGATGTTGCTGGCCTGGAGAACGCAAAGGAAGCATTGAAGGAAGCAGTCATTCTACCC
ATCAAGTTCCCTCATTTGTTCACTGGCAAGCGCCAACCCTGGAAGGGTATCTTGCTCTACGGTCCTCCAGGCACG
GGAAAATCTTATCTTGCCAAAGCCGTGGCAACTGAGGCAAACAGCACATTCTTCAGTGTCAGCAGTAGTGACCTG
GTCTCGAAGTGGATGGGTGAGAGTGAAAGACTTGTGAAACAGTTGTTTAACATGGCCCGTGAGAATAAGCCCGCG
ATTATCTTCATCGACGAGGTCGATGCGCTGTGCGGACCCCGTGGCGAAGGAGAGTCCGAGGCCTCACGGCGTATC
AAGACCGAATTGCTTGTACAGATGGACGGTGTCGGCAAAGACTCGAAGGGCGTTTTGATTTTGGGCGCAACCAAT
ATCCCTTGGCAACTGGATGCTGCTATTCGGCGACGATTCCAGCGAAGAATACACATCAGTCTTCCCGACTTCAAT
GCACGAATGAAGATGTTCATGCTAGCCGTGGGCTCGACGCCGTGTCAAATGACCCAGACCGACTATCGCCAATTG
GCCGATCTGAGCGAAGGCTACTCCGGTAGCGATATTAGTATTTGCGTGCAGGATGCACTAATGCAGCCAATCCGC
AAGATTCAAGGAGCAACACATTATAAGAAGGTACTCGATGAGGGTGTAGAGAAAGTCACGCCTTGCTCACCAGGG
GATGAGGGCGCAGTGGAAATGAGCTGGCTCGATATCGATGCAGATAAGCTTTTGGAGCCACCTCTCGCTCTGAAG
GATTTCGTCAAGGCAGTCAAGAACTCCCGGCCAACCGTTAGCGGAGAGGATCTCACGAGGAACGCTGAATGGACC
CAAGAATTCGGTAGTGAAGGTGCCTGA
Gene >Pro_DTO377G3_2|g2623.t1
ATGAGTAATACAGATTTCCTGGGACGGGCGATTGATACGGTCAAGAAGGCGATCGAGAATGACAACGATGGCGAG
TACGAAAAGGCTTATCAGATGTACTACTCCGCATTGGAGTTGTTCATGCTGGCCCTGAAATGGGAGAAGAACCCG
AAATCGAAGGAAATGATCCGCTCAAAGGCCGGCGAATATATGGATCGCGCGGAGAAGCTTAAGAACCACCTCGCT
GAGGACCGGAAAAAACCGAGTGCGGTTGGCGCAAATGGAAAGGTGGCGCAAGGCAGTGGGAAGGGAGGGTATGTA
TCAACTTCTTTGGACAAAAGTTTATGTTTTAGCACCGCCATATGTGTGATAAACAGTGTTAGCAAGTGAGCTTTT
GTCCTATGTATTCCCGCTAACAACACTGAATCGGACAGGAAGGAAGATGACGACAACGGCGAAGATGCGGATGCG
AAAAAGCTTCGATCGGCGCTTCAAGGAGCTATTCTGTCGGAGAAGCCGAACGTCAAGTGGGAAGATGTTGCTGGC
CTGGAGAACGCAAAGGAAGCATTGAAGGAAGCAGTCATTCTACCCATCAAGTTCCCTCATTTGTTCACTGGCAAG
CGCCAACCCTGGAAGGGTATCTTGCTCTACGGTCCTCCAGGCACGGGAAAATCTTATCTTGCCAAAGCCGTGGCA
ACTGAGGCAAACAGCACATTCTTCAGTGTCAGCAGTAGTGACCTGGTCTCGAAGTGGATGGGTGAGAGTGAAAGG
TATGCGATATCTTTATCTACGGGAGTTTCGAGAGTTGCATACTAATTCGCGTCTAGACTTGTGAAACAGTTGTTT
AACATGGCCCGTGAGAATAAGCCCGCGATTATCTTCATCGACGAGGTCGATGCGCTGTGCGGACCCCGTGGCGAA
GGAGAGTCCGAGGCCTCACGGCGTATCAAGACCGAATTGCTTGTACAGATGGACGGTGTCGGCAAAGACTCGAAG
GGCGTTTTGATTTTGGGCGCAACCAATATCCCTTGGCAACTGGATGCTGCTATTCGGCGACGATTCCAGCGAAGA
ATACACATCAGTCTTCCCGACTTCAATGCACGAATGAAGATGTTCATGCTAGCCGTGGGCTCGACGCCGTGTCAA
ATGACCCAGACCGACTATCGCCAATTGGCCGATCTGAGCGAAGGCTACTCCGGTAGCGATATTAGTATTTGCGTG
CAGGATGCACTAATGCAGCCAATCCGCAAGATTCAAGGAGCAACACATTATAAGAAGGTATGTATACTCAGTTCT
CACCGTCCCAGACCACAGCGACTGACCCGACTCCATCATAGGTACTCGATGAGGGTGTAGAGAAAGTCACGCCTT
GCTCACCAGGGGATGAGGGCGCAGTGGAAATGAGCTGGCTCGATATCGATGCAGATAAGCTTTTGGAGCCACCTC
TCGCTCTGAAGGATTTCGTCAAGGCAGTCAAGAACTCCCGGCCAACCGTTAGCGGAGAGGATCTCACGAGGAACG
CTGAATGGACCCAAGAATTCGGTAGTGAAGGTGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail