© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g261.t1 |
| Gene name | |
| Location | scaffold_01:674038..675901 |
| Strand | + |
| Gene length (bp) | 1863 |
| Transcript length (bp) | 1812 |
| Coding sequence length (bp) | 1812 |
| Protein length (aa) | 604 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 4.0E-39 | 112 | 515 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 4.3E-08 | 104 | 274 |
| PF06609 | TRI12 | Fungal trichothecene efflux pump (TRI12) | 9.2E-06 | 105 | 373 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 105 | 127 | 22 |
| 2 | 142 | 164 | 22 |
| 3 | 171 | 193 | 22 |
| 4 | 197 | 219 | 22 |
| 5 | 232 | 251 | 19 |
| 6 | 256 | 278 | 22 |
| 7 | 299 | 321 | 22 |
| 8 | 331 | 353 | 22 |
| 9 | 373 | 395 | 22 |
| 10 | 410 | 432 | 22 |
| 11 | 439 | 459 | 20 |
| 12 | 469 | 491 | 22 |
| 13 | 504 | 523 | 19 |
| 14 | 570 | 592 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| 3d_25C | Three days - 25 degrees Celsius | 9.16 | 3.94 | 14.38 |
| 5d_25C | Five days - 25 degrees Celsius | 12.07 | 5.65 | 18.49 |
| 7d_25C | Seven days - 25 degrees Celsius | 17.47 | 8.93 | 26.01 |
| 10d_25C | Ten days - 25 degrees Celsius | 14.78 | 7.36 | 22.21 |
| 7d_15C | Seven days - 15 degrees Celsius | 15.50 | 7.37 | 23.63 |
| 7d_30C | Seven days - 30 degrees Celsius | 18.30 | 9.53 | 27.06 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| 3d_25C | 5d_25C | 0.429175 | no |
| 3d_25C | 7d_25C | 0.021670 | yes |
| 3d_25C | 7d_15C | 0.070199 | no |
| 3d_25C | 7d_30C | 0.011688 | yes |
| 3d_25C | 10d_25C | 0.104886 | no |
| 5d_25C | 7d_25C | 0.218207 | no |
| 5d_25C | 7d_15C | 0.462978 | no |
| 5d_25C | 7d_30C | 0.149982 | no |
| 5d_25C | 10d_25C | 0.567120 | no |
| 7d_25C | 7d_15C | 0.749850 | no |
| 7d_25C | 7d_30C | 0.910551 | no |
| 7d_25C | 10d_25C | 0.625050 | no |
| 7d_15C | 7d_30C | 0.624782 | no |
| 7d_15C | 10d_25C | 0.912458 | no |
| 7d_30C | 10d_25C | 0.499252 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g261.t1 MPSDNEGQSCPSEATPLLRKNSVHRKTSYHDVSYSATDVESVCSYRDTEEEEANVRCISSASSAEGLDVGPASGA GSPNQQPNISTQDGEDYASRFIDISPTRFWIIFSGIMMGYLIGFFDSTLMASSHPVITSYFEAANSASWLSTAFL LTSTAFMPLLGRISDAFGRKHVYLFSIAMFFLTTAGCGLAQSIGSFIAARALCGLGAGGIFSIGQIISSDLVRLE YRGVYQSYINLCLGIGGSLGLAFGGYLCDHIGWRGAFLIQLPFIFVYFIAAAWTVPADLGIKQTGMERMKVWQLV RSIDILGSIILIICVTLLIMGLNFGGNVYPWSHPLIIISLVSSLVLAVILVRYELHVPRPVLPIELMATDPRASI IFGNFFASMSVHTMLFNAPLYFQAVKLTSPTASGLRLVASSIAVTISSVSTGFMINWTRRLKPYVIIGVCCMVIG GCAAASMGIDTSQPLSMICISFSSLGQGFAFPSLMVSILATSEKQDQAVATTTLGLWRNLGAVMGVAVSSWIFQN SLIYQLNKNVTGFEKNHIIALVRKSVDTIAHLDPIHRREVTLSYSAALQLTFISAALWAVIVLILLGRVRLPRLG RKA* |
| Coding | >Pro_DTO377G3_2|g261.t1 ATGCCCAGTGACAACGAGGGGCAATCATGTCCCTCTGAAGCCACCCCTCTCCTGCGCAAGAATTCGGTCCATCGG AAAACGAGTTATCACGATGTCTCGTATTCTGCAACGGATGTTGAATCAGTCTGCTCATACAGAGATACAGAAGAA GAAGAAGCCAACGTTCGCTGTATATCCAGTGCAAGCTCTGCCGAAGGACTCGATGTTGGTCCGGCTTCTGGGGCT GGCTCGCCCAACCAACAGCCGAACATCTCAACCCAAGATGGGGAGGATTACGCCTCGAGATTCATTGATATATCA CCGACAAGGTTTTGGATCATCTTTAGTGGTATCATGATGGGCTACCTGATCGGCTTCTTTGACTCAACGCTCATG GCTTCAAGCCATCCAGTCATCACCTCCTACTTCGAAGCAGCCAACTCAGCCTCCTGGTTATCGACGGCCTTTTTG TTGACATCGACCGCATTTATGCCGCTCTTGGGACGCATCTCTGACGCATTTGGCCGAAAGCATGTCTATCTCTTC TCTATCGCCATGTTCTTCCTCACGACAGCAGGCTGTGGCTTAGCGCAAAGTATCGGCAGTTTCATCGCTGCCCGC GCGCTGTGTGGGCTTGGTGCGGGTGGTATCTTCTCCATTGGTCAGATCATCTCTAGTGACTTGGTACGTCTCGAG TATCGCGGTGTCTACCAATCATACATCAATCTGTGTCTCGGCATCGGCGGTAGCCTCGGCCTTGCCTTTGGGGGT TACCTGTGTGATCATATCGGCTGGCGGGGTGCGTTTCTCATCCAACTGCCTTTCATCTTCGTTTACTTTATAGCA GCCGCTTGGACAGTCCCGGCAGATCTCGGCATTAAACAAACTGGAATGGAGCGCATGAAAGTCTGGCAGTTAGTC CGGAGCATCGATATACTGGGATCAATCATCTTGATTATATGTGTGACTCTGTTGATCATGGGTCTGAACTTCGGA GGCAATGTCTATCCTTGGAGCCATCCACTCATTATCATCTCCCTGGTGTCATCGTTAGTCCTAGCGGTTATCTTG GTACGTTACGAGCTGCACGTTCCACGACCCGTGCTACCAATTGAGCTCATGGCAACGGATCCTCGAGCTAGTATC ATCTTTGGCAATTTCTTTGCCTCCATGTCTGTACACACCATGCTGTTCAATGCTCCGCTGTATTTTCAGGCGGTG AAGCTGACCAGCCCAACTGCTTCTGGGCTACGCCTTGTGGCCTCCTCCATAGCTGTGACTATCTCTAGCGTGAGC ACCGGGTTCATGATTAACTGGACCAGACGTCTCAAACCTTATGTCATCATCGGTGTATGTTGTATGGTGATAGGT GGATGTGCAGCTGCATCCATGGGGATTGACACCTCTCAACCACTCTCCATGATCTGCATCTCATTCTCCAGTCTA GGTCAGGGCTTCGCATTTCCCAGCTTGATGGTATCTATCCTCGCCACGAGCGAGAAACAAGATCAGGCCGTCGCA ACAACCACTCTGGGGCTGTGGAGAAACCTTGGCGCCGTGATGGGTGTGGCTGTCAGCAGCTGGATCTTTCAGAAC AGTCTCATATACCAGCTTAACAAAAATGTTACTGGTTTTGAGAAGAACCATATCATTGCACTTGTCCGCAAATCT GTTGATACTATCGCTCACTTGGATCCAATCCATCGGCGAGAAGTCACTCTATCATATTCCGCCGCTCTTCAACTG ACCTTCATATCTGCCGCCTTATGGGCAGTCATTGTGTTAATATTGTTGGGTCGAGTCCGACTACCGCGGTTGGGG AGAAAGGCCTAG |
| Transcript | >Pro_DTO377G3_2|g261.t1 ATGCCCAGTGACAACGAGGGGCAATCATGTCCCTCTGAAGCCACCCCTCTCCTGCGCAAGAATTCGGTCCATCGG AAAACGAGTTATCACGATGTCTCGTATTCTGCAACGGATGTTGAATCAGTCTGCTCATACAGAGATACAGAAGAA GAAGAAGCCAACGTTCGCTGTATATCCAGTGCAAGCTCTGCCGAAGGACTCGATGTTGGTCCGGCTTCTGGGGCT GGCTCGCCCAACCAACAGCCGAACATCTCAACCCAAGATGGGGAGGATTACGCCTCGAGATTCATTGATATATCA CCGACAAGGTTTTGGATCATCTTTAGTGGTATCATGATGGGCTACCTGATCGGCTTCTTTGACTCAACGCTCATG GCTTCAAGCCATCCAGTCATCACCTCCTACTTCGAAGCAGCCAACTCAGCCTCCTGGTTATCGACGGCCTTTTTG TTGACATCGACCGCATTTATGCCGCTCTTGGGACGCATCTCTGACGCATTTGGCCGAAAGCATGTCTATCTCTTC TCTATCGCCATGTTCTTCCTCACGACAGCAGGCTGTGGCTTAGCGCAAAGTATCGGCAGTTTCATCGCTGCCCGC GCGCTGTGTGGGCTTGGTGCGGGTGGTATCTTCTCCATTGGTCAGATCATCTCTAGTGACTTGGTACGTCTCGAG TATCGCGGTGTCTACCAATCATACATCAATCTGTGTCTCGGCATCGGCGGTAGCCTCGGCCTTGCCTTTGGGGGT TACCTGTGTGATCATATCGGCTGGCGGGGTGCGTTTCTCATCCAACTGCCTTTCATCTTCGTTTACTTTATAGCA GCCGCTTGGACAGTCCCGGCAGATCTCGGCATTAAACAAACTGGAATGGAGCGCATGAAAGTCTGGCAGTTAGTC CGGAGCATCGATATACTGGGATCAATCATCTTGATTATATGTGTGACTCTGTTGATCATGGGTCTGAACTTCGGA GGCAATGTCTATCCTTGGAGCCATCCACTCATTATCATCTCCCTGGTGTCATCGTTAGTCCTAGCGGTTATCTTG GTACGTTACGAGCTGCACGTTCCACGACCCGTGCTACCAATTGAGCTCATGGCAACGGATCCTCGAGCTAGTATC ATCTTTGGCAATTTCTTTGCCTCCATGTCTGTACACACCATGCTGTTCAATGCTCCGCTGTATTTTCAGGCGGTG AAGCTGACCAGCCCAACTGCTTCTGGGCTACGCCTTGTGGCCTCCTCCATAGCTGTGACTATCTCTAGCGTGAGC ACCGGGTTCATGATTAACTGGACCAGACGTCTCAAACCTTATGTCATCATCGGTGTATGTTGTATGGTGATAGGT GGATGTGCAGCTGCATCCATGGGGATTGACACCTCTCAACCACTCTCCATGATCTGCATCTCATTCTCCAGTCTA GGTCAGGGCTTCGCATTTCCCAGCTTGATGGTATCTATCCTCGCCACGAGCGAGAAACAAGATCAGGCCGTCGCA ACAACCACTCTGGGGCTGTGGAGAAACCTTGGCGCCGTGATGGGTGTGGCTGTCAGCAGCTGGATCTTTCAGAAC AGTCTCATATACCAGCTTAACAAAAATGTTACTGGTTTTGAGAAGAACCATATCATTGCACTTGTCCGCAAATCT GTTGATACTATCGCTCACTTGGATCCAATCCATCGGCGAGAAGTCACTCTATCATATTCCGCCGCTCTTCAACTG ACCTTCATATCTGCCGCCTTATGGGCAGTCATTGTGTTAATATTGTTGGGTCGAGTCCGACTACCGCGGTTGGGG AGAAAGGCCTAG |
| Gene | >Pro_DTO377G3_2|g261.t1 ATGCCCAGTGACAACGAGGGGCAATCATGTCCCTCTGAAGCCACCCCTCTCCTGCGCAAGAATTCGGTCCATCGG AAAACGAGTTATCACGATGTCTCGTATTCTGCAACGGATGTTGAATCAGTCTGCTCATACAGAGATACAGAAGAA GAAGAAGCCAACGTTCGCTGTATATCCAGTGCAAGCTCTGCCGAAGGACTCGATGTTGGTCCGGCTTCTGGGGCT GGCTCGCCCAACCAACAGCCGAACATCTCAACCCAAGATGGGGAGGATTACGCCTCGAGATTCATTGATATATCA CCGACAAGGTTTTGGATCATCTTTAGTGGTATCATGATGGGCTACCTGATCGGCTTCTTTGACTCAACGCTCATG GCTTCAAGCCATCCAGTCATCACCTCCTACTTCGAAGCAGCCAACTCAGCCTCCTGGTTATCGACGGCCTTTTTG TTGACATCGACCGCATTTATGCCGCTCTTGGGACGCATCTCTGACGCATTTGGCCGAAAGCATGTCTATCTCTTC TCTATCGCCATGTTCTTCCTCACGACAGCAGGCTGTGGCTTAGCGCAAAGTATCGGCAGTTTCATCGCTGCCCGC GCGCTGTGTGGGCTTGGTGCGGGTGGTATCTTCTCCATTGGTCAGATCATCTCTAGTGACTTGGTACGTCTCGAG TATCGCGGTGTCTACCAATCATACATCAATCTGTGTCTCGGCATCGGCGGTAGCCTCGGCCTTGCCTTTGGGGGT TACCTGTGTGATCATATCGGCTGGCGGGGTGCGTTTCTCATCCAACTGCCTTTCATCTTCGTTTACTTTATAGCA GCCGCTTGGACAGTCCCGGCAGATCTCGGCATTAAACAAACTGGAATGGAGCGCATGAAAGTCTGGCAGTTAGTC CGGAGCATCGATATACTGGGATCAATCATCTTGATTATATGTGTGACTCTGTTGATCATGGGTCTGAACTTCGGA GGCAATGTCTATCCTTGGAGCCATCCACTCATTATCATCTCCCTGGTGTCATCGTTAGTCCTAGCGGTTATCTTG GTACGTTACGAGCTGCACGTTCCACGACCCGTGCTACCAATTGAGCTCATGGCAACGGATCCTCGAGCTAGTATC ATCTTTGGCAATTTCTTTGCCTCCATGTCTGTACACACCATGCTGTTCAATGCTCCGCTGTATTTTCAGGCGGTG AAGCTGACCAGCCCAACTGCTTCTGGGCTACGCCTTGTGGCCTCCTCCATAGCTGTGACTATCTCTAGCGTGAGC ACCGGGTTCATGATTAACTGGACCAGACGTCTCAAACCTTATGTCATCATCGGTGTATGTTGTATGGTGATAGGT GGATGTGCAGCTGCATCCATGGGGATTGACACCTCTCAACCACTCTCCATGATCTGCATCTCATTCTCCAGTCTA GGTCAGGGCTTCGCATTTCCCAGCTTGATGGTATCTATCCTCGCCACGAGCGAGAAACAAGATCAGGCCGTCGCA ACAACCACTCTGGGGCTGTGGAGAAACCTTGGCGCCGTGATGGGTGTGGCTGTCAGCAGCTGGATCTTTCAGAAC AGTCTCATATACCAGCTTAACAAAAATGTTACTGGTTTTGAGAAGAACCATATCATTGCACTTGTCCGCAAATCT GTTGATACTATCGCTCACTTGGATCCAATCCATCGGCGAGAAGGTGTGTCTCATCCCCTTGGAATGCCGATTTGA TTTGCTAATAACCACCCAGTCACTCTATCATATTCCGCCGCTCTTCAACTGACCTTCATATCTGCCGCCTTATGG GCAGTCATTGTGTTAATATTGTTGGGTCGAGTCCGACTACCGCGGTTGGGGAGAAAGGCCTAG |