Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2607.t1
Gene name
Locationscaffold_03:484930..486668
Strand-
Gene length (bp)1738
Transcript length (bp)1608
Coding sequence length (bp)1608
Protein length (aa) 536

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00152 tRNA-synt_2 tRNA synthetases class II (D, K and N) 5.1E-66 141 528

GO

GO Term Description Terminal node
GO:0005524 ATP binding Yes
GO:0004812 aminoacyl-tRNA ligase activity Yes
GO:0000166 nucleotide binding Yes
GO:0006418 tRNA aminoacylation for protein translation Yes
GO:0043039 tRNA aminoacylation No
GO:0005488 binding No
GO:0016875 ligase activity, forming carbon-oxygen bonds No
GO:0006520 cellular amino acid metabolic process No
GO:0008152 metabolic process No
GO:0006399 tRNA metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0030554 adenyl nucleotide binding No
GO:0006082 organic acid metabolic process No
GO:0071704 organic substance metabolic process No
GO:0036094 small molecule binding No
GO:1901360 organic cyclic compound metabolic process No
GO:0097367 carbohydrate derivative binding No
GO:0017076 purine nucleotide binding No
GO:0008150 biological_process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0043167 ion binding No
GO:0019752 carboxylic acid metabolic process No
GO:0016070 RNA metabolic process No
GO:0032559 adenyl ribonucleotide binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0003824 catalytic activity No
GO:0043038 amino acid activation No
GO:0140640 catalytic activity, acting on a nucleic acid No
GO:0044238 primary metabolic process No
GO:0034660 ncRNA metabolic process No
GO:0009987 cellular process No
GO:1901564 organonitrogen compound metabolic process No
GO:0044237 cellular metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:0043168 anion binding No
GO:1901363 heterocyclic compound binding No
GO:0140101 catalytic activity, acting on a tRNA No
GO:0043436 oxoacid metabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0140098 catalytic activity, acting on RNA No
GO:0032555 purine ribonucleotide binding No
GO:0032553 ribonucleotide binding No
GO:0097159 organic cyclic compound binding No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0016874 ligase activity No
GO:0006807 nitrogen compound metabolic process No
GO:0044281 small molecule metabolic process No
GO:0003674 molecular_function No
GO:0046483 heterocycle metabolic process No
GO:1901265 nucleoside phosphate binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2607.t1
MQIWRRTFATSVGRLNQSSINSRPSLVRCAQILQASKNGGVCSFEDQEIKVNGFIRSVRKQKRFAFAEISDGSTV
VPLQAILKPAQAADLSTGTAIEISGIWKACPPGKEQTHELQTSDVKIIGAADPETFPIQKKYHSPDFLRQIPHLR
IRTPFNSLLSRFRSECIFQLGNVFHSHPDGAFTQVQPPLITSSDCEGAGETFTLAPRGAATPTTENEHFFRAPKY
LTVSSQLHLEAYAAELGNVWTLTPVFRAEKSDTPRHLSEFYMLEAEVNFMSDLDSLTGLVEHLLRDLTRRLYNTP
VGQEILSAKRSGEPGQETAEETTGSLRQRWTDLMDGPKWHRVTYTQAVEMLQRAVAEDGASFEHSPTWDGGLQLE
HEKYIVEVLHQGRPVFVTDYPKSVKPFYMAPSQVADGSNTTGETVACFDLLLPEVSEVAGGSLREHRLPDLIQNM
REHGLIKPRQIPESGDTAPDESLYPHLTPDEDLSHLQWYADLRRWGSAPHGGFGLGFDRFLGYLTGVSSVRDIVS
FPRYFGRADC*
Coding >Pro_DTO377G3_2|g2607.t1
ATGCAGATATGGCGGCGAACCTTCGCCACATCTGTGGGCAGACTTAATCAAAGCTCAATTAATTCCCGTCCCTCT
CTTGTTCGATGCGCACAGATCCTCCAAGCCAGCAAGAACGGTGGAGTTTGCAGCTTCGAGGACCAAGAAATCAAA
GTGAATGGGTTCATTCGATCTGTACGGAAACAGAAACGCTTTGCATTCGCAGAAATATCTGATGGGTCGACCGTG
GTGCCATTACAGGCAATTCTAAAACCCGCGCAAGCAGCAGATCTGTCAACTGGAACTGCGATCGAAATATCAGGC
ATATGGAAAGCTTGCCCACCGGGTAAAGAGCAAACTCATGAGCTCCAAACAAGCGATGTCAAAATTATAGGCGCA
GCGGACCCAGAGACGTTTCCAATCCAAAAGAAGTACCACAGCCCCGACTTCCTGCGCCAGATTCCACACCTCCGC
ATTCGAACGCCCTTCAATTCTCTCCTTTCACGCTTCCGATCTGAGTGCATATTCCAACTTGGCAATGTCTTCCAC
TCTCATCCAGATGGAGCTTTCACACAAGTTCAGCCTCCTCTTATAACGTCCTCAGATTGTGAAGGTGCAGGTGAG
ACGTTCACATTAGCACCACGCGGTGCCGCTACACCCACCACCGAGAACGAGCACTTTTTCCGAGCGCCAAAATAC
CTCACTGTATCGTCGCAGCTTCACCTTGAAGCTTATGCGGCAGAGCTAGGAAACGTCTGGACATTGACACCCGTG
TTCCGGGCGGAGAAGAGCGATACGCCACGCCATCTCAGCGAGTTCTACATGCTCGAAGCCGAGGTCAATTTCATG
TCCGATCTTGACTCGCTGACAGGGTTAGTGGAACACCTGCTACGCGATCTAACGCGTCGTCTATATAATACTCCG
GTGGGCCAAGAGATCCTGTCGGCAAAGCGGTCTGGCGAGCCAGGCCAGGAAACCGCAGAGGAGACGACAGGATCT
CTACGGCAAAGATGGACCGATCTTATGGATGGGCCAAAATGGCACCGGGTCACATACACCCAAGCAGTGGAAATG
CTCCAGCGTGCTGTCGCCGAAGACGGAGCATCATTTGAGCATTCCCCGACATGGGATGGAGGTCTACAACTTGAG
CATGAAAAGTATATCGTCGAGGTGCTCCATCAAGGGCGTCCTGTCTTTGTGACAGACTACCCGAAATCCGTCAAG
CCGTTCTACATGGCCCCTTCGCAAGTCGCCGATGGCAGCAACACAACCGGAGAGACAGTGGCATGTTTCGACCTG
CTCCTCCCCGAGGTCAGCGAAGTCGCCGGAGGCTCTCTGCGCGAGCATCGCCTGCCTGATCTCATTCAGAACATG
CGTGAGCACGGTTTGATCAAGCCCCGACAGATTCCCGAGTCAGGTGATACAGCTCCAGATGAGTCGCTGTATCCC
CATCTCACTCCCGACGAGGACCTGAGCCACCTCCAATGGTACGCTGACCTCCGACGCTGGGGGTCTGCTCCCCAT
GGAGGCTTTGGGCTCGGGTTTGATCGATTCCTCGGATATTTGACTGGTGTTTCCAGCGTTCGGGATATTGTATCC
TTCCCGCGATACTTCGGTCGCGCTGATTGCTGA
Transcript >Pro_DTO377G3_2|g2607.t1
ATGCAGATATGGCGGCGAACCTTCGCCACATCTGTGGGCAGACTTAATCAAAGCTCAATTAATTCCCGTCCCTCT
CTTGTTCGATGCGCACAGATCCTCCAAGCCAGCAAGAACGGTGGAGTTTGCAGCTTCGAGGACCAAGAAATCAAA
GTGAATGGGTTCATTCGATCTGTACGGAAACAGAAACGCTTTGCATTCGCAGAAATATCTGATGGGTCGACCGTG
GTGCCATTACAGGCAATTCTAAAACCCGCGCAAGCAGCAGATCTGTCAACTGGAACTGCGATCGAAATATCAGGC
ATATGGAAAGCTTGCCCACCGGGTAAAGAGCAAACTCATGAGCTCCAAACAAGCGATGTCAAAATTATAGGCGCA
GCGGACCCAGAGACGTTTCCAATCCAAAAGAAGTACCACAGCCCCGACTTCCTGCGCCAGATTCCACACCTCCGC
ATTCGAACGCCCTTCAATTCTCTCCTTTCACGCTTCCGATCTGAGTGCATATTCCAACTTGGCAATGTCTTCCAC
TCTCATCCAGATGGAGCTTTCACACAAGTTCAGCCTCCTCTTATAACGTCCTCAGATTGTGAAGGTGCAGGTGAG
ACGTTCACATTAGCACCACGCGGTGCCGCTACACCCACCACCGAGAACGAGCACTTTTTCCGAGCGCCAAAATAC
CTCACTGTATCGTCGCAGCTTCACCTTGAAGCTTATGCGGCAGAGCTAGGAAACGTCTGGACATTGACACCCGTG
TTCCGGGCGGAGAAGAGCGATACGCCACGCCATCTCAGCGAGTTCTACATGCTCGAAGCCGAGGTCAATTTCATG
TCCGATCTTGACTCGCTGACAGGGTTAGTGGAACACCTGCTACGCGATCTAACGCGTCGTCTATATAATACTCCG
GTGGGCCAAGAGATCCTGTCGGCAAAGCGGTCTGGCGAGCCAGGCCAGGAAACCGCAGAGGAGACGACAGGATCT
CTACGGCAAAGATGGACCGATCTTATGGATGGGCCAAAATGGCACCGGGTCACATACACCCAAGCAGTGGAAATG
CTCCAGCGTGCTGTCGCCGAAGACGGAGCATCATTTGAGCATTCCCCGACATGGGATGGAGGTCTACAACTTGAG
CATGAAAAGTATATCGTCGAGGTGCTCCATCAAGGGCGTCCTGTCTTTGTGACAGACTACCCGAAATCCGTCAAG
CCGTTCTACATGGCCCCTTCGCAAGTCGCCGATGGCAGCAACACAACCGGAGAGACAGTGGCATGTTTCGACCTG
CTCCTCCCCGAGGTCAGCGAAGTCGCCGGAGGCTCTCTGCGCGAGCATCGCCTGCCTGATCTCATTCAGAACATG
CGTGAGCACGGTTTGATCAAGCCCCGACAGATTCCCGAGTCAGGTGATACAGCTCCAGATGAGTCGCTGTATCCC
CATCTCACTCCCGACGAGGACCTGAGCCACCTCCAATGGTACGCTGACCTCCGACGCTGGGGGTCTGCTCCCCAT
GGAGGCTTTGGGCTCGGGTTTGATCGATTCCTCGGATATTTGACTGGTGTTTCCAGCGTTCGGGATATTGTATCC
TTCCCGCGATACTTCGGTCGCGCTGATTGCTGA
Gene >Pro_DTO377G3_2|g2607.t1
ATGCAGATATGGCGGCGAACCTTCGCCACATCTGTGGGCAGACTTAATCAAAGCTCAATTAATTCCCGTCCCTCT
CTTGTTCGATGCGCACAGATCCTCCAAGCCAGCAAGAACGGTGGAGTTTGCAGCTTCGAGGACCAAGAAATCAAA
GTGAATGGGTTCATTCGATCTGTACGGAAACAGAAACGCTTTGCATTCGCAGAAATATCTGATGGGTCGACCGTG
GTGCCATTACAGGCAATTCTAAAACCCGCGCAAGCAGCAGAGTATGTTCGCGTGAGCTGTGGTCCTCGACTTGTT
TGTCCATGAAGACTAACCCGAGCTTTCTTTAGTCTGTCAACTGGAACTGCGATCGAAATATCAGGCATATGGAAA
GCTTGCCCACCGGGTAAAGAGCAAACTCATGAGCTCCAAACAAGCGATGTCAAAATTATAGGCGCAGCGGACCCA
GAGGTGAGACCAAGAGCATTTCTACAGTTGTTGCTCCTCACACTAACCACGATACATATGGTTACAGACGTTTCC
AATCCAAAAGAAGTACCACAGCCCCGACTTCCTGCGCCAGATTCCACACCTCCGCATTCGAACGCCCTTCAATTC
TCTCCTTTCACGCTTCCGATCTGAGTGCATATTCCAACTTGGCAATGTCTTCCACTCTCATCCAGATGGAGCTTT
CACACAAGTTCAGCCTCCTCTTATAACGTCCTCAGATTGTGAAGGTGCAGGTGAGACGTTCACATTAGCACCACG
CGGTGCCGCTACACCCACCACCGAGAACGAGCACTTTTTCCGAGCGCCAAAATACCTCACTGTATCGTCGCAGCT
TCACCTTGAAGCTTATGCGGCAGAGCTAGGAAACGTCTGGACATTGACACCCGTGTTCCGGGCGGAGAAGAGCGA
TACGCCACGCCATCTCAGCGAGTTCTACATGCTCGAAGCCGAGGTCAATTTCATGTCCGATCTTGACTCGCTGAC
AGGGTTAGTGGAACACCTGCTACGCGATCTAACGCGTCGTCTATATAATACTCCGGTGGGCCAAGAGATCCTGTC
GGCAAAGCGGTCTGGCGAGCCAGGCCAGGAAACCGCAGAGGAGACGACAGGATCTCTACGGCAAAGATGGACCGA
TCTTATGGATGGGCCAAAATGGCACCGGGTCACATACACCCAAGCAGTGGAAATGCTCCAGCGTGCTGTCGCCGA
AGACGGAGCATCATTTGAGCATTCCCCGACATGGGATGGAGGTCTACAACTTGAGCATGAAAAGTATATCGTCGA
GGTGCTCCATCAAGGGCGTCCTGTCTTTGTGACAGACTACCCGAAATCCGTCAAGCCGTTCTACATGGCCCCTTC
GCAAGTCGCCGATGGCAGCAACACAACCGGAGAGACAGTGGCATGTTTCGACCTGCTCCTCCCCGAGGTCAGCGA
AGTCGCCGGAGGCTCTCTGCGCGAGCATCGCCTGCCTGATCTCATTCAGAACATGCGTGAGCACGGTTTGATCAA
GCCCCGACAGATTCCCGAGTCAGGTGATACAGCTCCAGATGAGTCGCTGTATCCCCATCTCACTCCCGACGAGGA
CCTGAGCCACCTCCAATGGTACGCTGACCTCCGACGCTGGGGGTCTGCTCCCCATGGAGGCTTTGGGCTCGGGTT
TGATCGATTCCTCGGATATTTGACTGGTGTTTCCAGCGTTCGGGATATTGTATCCTTCCCGCGATACTTCGGTCG
CGCTGATTGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail