© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g2562.t1 |
| Gene name | |
| Location | scaffold_03:350637..351439 |
| Strand | + |
| Gene length (bp) | 802 |
| Transcript length (bp) | 735 |
| Coding sequence length (bp) | 735 |
| Protein length (aa) | 245 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF14021 | TNT | Tuberculosis necrotizing toxin | 7.6E-31 | 126 | 219 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0061810 | NAD glycohydrolase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | No |
| GO:0003953 | NAD+ nucleosidase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016787 | hydrolase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 18 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g2562.t1 MHLSTISVLLSVALAQASSFITPNRHATNKEPDYPKRCYPDPCKGVTHVNSTAVCGDPRLGPKVLPRYFPLSNEL KTYARFGELCPIEFLEKWTVNASDPTAYWIYPDSDGFAQTSTNASILGNFTLRVGQKLDRFGSEFGKFLAPLGAP YIERSLPPSNLFAPTNSSFPYNYHVYQVTKEFDVLLGPISPWFEQPGFGSQLLALTSVADLLEEGALKRLDLQDY DEAEEYSAGYLPAPNKTST* |
| Coding | >Pro_DTO377G3_2|g2562.t1 ATGCATCTCTCAACTATATCCGTGCTTCTTTCGGTTGCTCTAGCACAAGCTTCTTCTTTCATCACTCCTAACAGG CACGCTACAAACAAGGAGCCGGATTACCCAAAAAGATGTTACCCCGACCCCTGTAAAGGAGTGACCCACGTGAAC TCTACTGCTGTTTGTGGTGACCCACGACTTGGTCCGAAAGTCCTCCCCAGATATTTCCCTCTCTCCAATGAGCTC AAGACATACGCCCGCTTCGGCGAGCTCTGCCCAATTGAGTTCCTGGAGAAATGGACCGTGAACGCTTCCGACCCC ACGGCTTACTGGATCTATCCAGACAGCGATGGATTTGCCCAAACATCCACGAATGCGTCTATTCTTGGCAATTTT ACACTCCGCGTGGGCCAGAAGCTTGATAGATTCGGGTCTGAATTTGGAAAGTTCTTGGCACCTCTTGGAGCTCCA TATATCGAGCGATCCCTGCCACCATCCAATCTGTTCGCGCCAACCAACAGCAGCTTCCCGTACAACTACCATGTC TACCAGGTGACCAAGGAATTTGATGTCCTTTTGGGGCCCATTTCGCCTTGGTTTGAGCAGCCTGGGTTTGGATCC CAGCTTTTGGCTCTGACTAGTGTGGCGGATCTGTTGGAAGAGGGAGCCTTGAAAAGACTGGATTTGCAAGACTAT GATGAAGCCGAAGAATACTCTGCGGGTTATCTGCCTGCTCCTAACAAGACTTCCACCTAA |
| Transcript | >Pro_DTO377G3_2|g2562.t1 ATGCATCTCTCAACTATATCCGTGCTTCTTTCGGTTGCTCTAGCACAAGCTTCTTCTTTCATCACTCCTAACAGG CACGCTACAAACAAGGAGCCGGATTACCCAAAAAGATGTTACCCCGACCCCTGTAAAGGAGTGACCCACGTGAAC TCTACTGCTGTTTGTGGTGACCCACGACTTGGTCCGAAAGTCCTCCCCAGATATTTCCCTCTCTCCAATGAGCTC AAGACATACGCCCGCTTCGGCGAGCTCTGCCCAATTGAGTTCCTGGAGAAATGGACCGTGAACGCTTCCGACCCC ACGGCTTACTGGATCTATCCAGACAGCGATGGATTTGCCCAAACATCCACGAATGCGTCTATTCTTGGCAATTTT ACACTCCGCGTGGGCCAGAAGCTTGATAGATTCGGGTCTGAATTTGGAAAGTTCTTGGCACCTCTTGGAGCTCCA TATATCGAGCGATCCCTGCCACCATCCAATCTGTTCGCGCCAACCAACAGCAGCTTCCCGTACAACTACCATGTC TACCAGGTGACCAAGGAATTTGATGTCCTTTTGGGGCCCATTTCGCCTTGGTTTGAGCAGCCTGGGTTTGGATCC CAGCTTTTGGCTCTGACTAGTGTGGCGGATCTGTTGGAAGAGGGAGCCTTGAAAAGACTGGATTTGCAAGACTAT GATGAAGCCGAAGAATACTCTGCGGGTTATCTGCCTGCTCCTAACAAGACTTCCACCTAA |
| Gene | >Pro_DTO377G3_2|g2562.t1 ATGCATCTCTCAACTATATCCGTGCTTCTTTCGGTTGCTCTAGCACAAGCTTCTTCTTTCATCACTCCTAACAGG CACGCTACAAACAAGGTCAGTGGTCCCAAGACCCCTTTTATGGTACCAGGCCATATAAGTTTCAAATGCTCATAC TTCTTAGGAGCCGGATTACCCAAAAAGATGTTACCCCGACCCCTGTAAAGGAGTGACCCACGTGAACTCTACTGC TGTTTGTGGTGACCCACGACTTGGTCCGAAAGTCCTCCCCAGATATTTCCCTCTCTCCAATGAGCTCAAGACATA CGCCCGCTTCGGCGAGCTCTGCCCAATTGAGTTCCTGGAGAAATGGACCGTGAACGCTTCCGACCCCACGGCTTA CTGGATCTATCCAGACAGCGATGGATTTGCCCAAACATCCACGAATGCGTCTATTCTTGGCAATTTTACACTCCG CGTGGGCCAGAAGCTTGATAGATTCGGGTCTGAATTTGGAAAGTTCTTGGCACCTCTTGGAGCTCCATATATCGA GCGATCCCTGCCACCATCCAATCTGTTCGCGCCAACCAACAGCAGCTTCCCGTACAACTACCATGTCTACCAGGT GACCAAGGAATTTGATGTCCTTTTGGGGCCCATTTCGCCTTGGTTTGAGCAGCCTGGGTTTGGATCCCAGCTTTT GGCTCTGACTAGTGTGGCGGATCTGTTGGAAGAGGGAGCCTTGAAAAGACTGGATTTGCAAGACTATGATGAAGC CGAAGAATACTCTGCGGGTTATCTGCCTGCTCCTAACAAGACTTCCACCTAA |