Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g2556.t1
Gene name
Location	scaffold_03:333937..335260
Strand	+
Gene length (bp)	1323
Transcript length (bp)	1323
Coding sequence length (bp)	1323
Protein length (aa)	441

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04193	PQ-loop	PQ loop repeat	4.6E-18	43	99
PF04193	PQ-loop	PQ loop repeat	3.0E-19	262	321

GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 21	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	36	58	22
2	75	97	22
3	102	124	22
4	293	315	22
5	342	359	17

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g2556.t1 MSPPLLQYLLSGTLPDHCEPTSPFLTAVSSHLHICIPTPLAAISSVLGTLSIVSWLFAQLPQIYKNYQVQSTSGL SIFFLVIWCLGDASNLVGALYTRQAGWQVVIASYYVFVDIALVFQFFWYTHYKPRQNDSYDDLSHSHDSARRNII QGVPPPGHDSDNQTPAPVNMNNKHPEAKDGGFQAGSALDSTHVPTASYSNEKLSSSRRSVRLGSSMQSPPFALPR TMLMASLLCAVLANAAPTDKSDTFISEAPRETIVEIIGRVFSWMSTILYLGSRPPQLYKNYQRKSTEGLSPLLFM AAFCGNLFYSSSMLTNPNAWSDFSPYGGGGWADNHGNNRLEWIGRATPFFLGAFGVLGLDGFMGVQFLMYGDGPE HEDDESFISGDGDDPKRGRSRWRHVHGWMRGWIPSASPRRDSRESSVSQEGQALLGAERGRYGTV*
Coding	>Pro_DTO377G3_2\|g2556.t1 ATGTCTCCTCCACTATTACAGTACCTCCTCTCTGGGACCCTTCCTGACCACTGTGAACCGACCTCGCCCTTCCTG ACCGCCGTCTCCTCGCATCTCCACATCTGCATCCCCACTCCTCTCGCGGCGATCTCTTCCGTCCTTGGGACCCTC AGCATAGTCTCATGGCTTTTCGCACAACTACCCCAGATTTATAAGAACTACCAAGTGCAGTCGACGTCAGGCTTA TCGATATTTTTCTTGGTAATCTGGTGCCTTGGTGACGCGAGCAACCTCGTTGGAGCGCTATATACCCGACAGGCA GGGTGGCAGGTCGTGATTGCCAGTTATTACGTCTTCGTTGATATCGCTCTGGTATTCCAGTTTTTCTGGTACACT CATTACAAACCTCGCCAGAATGATTCGTATGACGACTTGTCACATTCGCATGACTCGGCTCGTCGAAACATCATT CAAGGCGTGCCTCCTCCAGGCCACGACTCAGACAATCAGACCCCGGCTCCCGTCAACATGAACAACAAGCACCCC GAGGCCAAGGATGGGGGCTTCCAGGCCGGGTCAGCACTCGACTCGACCCATGTGCCAACAGCGTCATACTCAAAC GAGAAATTGAGCTCATCGCGTCGATCTGTAAGGTTGGGCAGTAGCATGCAGAGCCCGCCATTCGCACTGCCCCGG ACGATGCTCATGGCATCACTCCTTTGTGCCGTACTCGCAAACGCTGCCCCCACCGACAAGTCCGACACGTTCATT TCGGAAGCACCGCGGGAGACCATCGTCGAGATCATCGGCCGCGTCTTCTCTTGGATGTCAACAATCCTGTATCTC GGCTCACGCCCTCCACAGCTATACAAAAACTACCAGCGCAAGAGCACTGAAGGTCTTTCCCCACTGCTCTTCATG GCCGCATTCTGTGGGAACCTGTTCTACTCCAGCTCGATGCTCACCAACCCGAATGCTTGGTCCGATTTCTCCCCA TATGGCGGCGGCGGCTGGGCTGACAACCACGGCAATAACAGATTGGAATGGATTGGACGCGCTACGCCGTTCTTC TTGGGTGCATTCGGTGTGTTGGGACTGGACGGGTTCATGGGTGTTCAGTTTCTCATGTATGGCGATGGTCCAGAG CACGAGGATGACGAGAGTTTCATCAGTGGCGATGGGGATGACCCAAAGCGCGGTCGCAGTCGCTGGAGGCATGTT CACGGCTGGATGCGAGGCTGGATCCCCTCTGCTTCGCCCCGGAGGGACTCAAGGGAATCTTCGGTTTCTCAAGAG GGACAGGCTTTGTTGGGCGCAGAGCGCGGCCGCTACGGCACTGTTTGA
Transcript	>Pro_DTO377G3_2\|g2556.t1 ATGTCTCCTCCACTATTACAGTACCTCCTCTCTGGGACCCTTCCTGACCACTGTGAACCGACCTCGCCCTTCCTG ACCGCCGTCTCCTCGCATCTCCACATCTGCATCCCCACTCCTCTCGCGGCGATCTCTTCCGTCCTTGGGACCCTC AGCATAGTCTCATGGCTTTTCGCACAACTACCCCAGATTTATAAGAACTACCAAGTGCAGTCGACGTCAGGCTTA TCGATATTTTTCTTGGTAATCTGGTGCCTTGGTGACGCGAGCAACCTCGTTGGAGCGCTATATACCCGACAGGCA GGGTGGCAGGTCGTGATTGCCAGTTATTACGTCTTCGTTGATATCGCTCTGGTATTCCAGTTTTTCTGGTACACT CATTACAAACCTCGCCAGAATGATTCGTATGACGACTTGTCACATTCGCATGACTCGGCTCGTCGAAACATCATT CAAGGCGTGCCTCCTCCAGGCCACGACTCAGACAATCAGACCCCGGCTCCCGTCAACATGAACAACAAGCACCCC GAGGCCAAGGATGGGGGCTTCCAGGCCGGGTCAGCACTCGACTCGACCCATGTGCCAACAGCGTCATACTCAAAC GAGAAATTGAGCTCATCGCGTCGATCTGTAAGGTTGGGCAGTAGCATGCAGAGCCCGCCATTCGCACTGCCCCGG ACGATGCTCATGGCATCACTCCTTTGTGCCGTACTCGCAAACGCTGCCCCCACCGACAAGTCCGACACGTTCATT TCGGAAGCACCGCGGGAGACCATCGTCGAGATCATCGGCCGCGTCTTCTCTTGGATGTCAACAATCCTGTATCTC GGCTCACGCCCTCCACAGCTATACAAAAACTACCAGCGCAAGAGCACTGAAGGTCTTTCCCCACTGCTCTTCATG GCCGCATTCTGTGGGAACCTGTTCTACTCCAGCTCGATGCTCACCAACCCGAATGCTTGGTCCGATTTCTCCCCA TATGGCGGCGGCGGCTGGGCTGACAACCACGGCAATAACAGATTGGAATGGATTGGACGCGCTACGCCGTTCTTC TTGGGTGCATTCGGTGTGTTGGGACTGGACGGGTTCATGGGTGTTCAGTTTCTCATGTATGGCGATGGTCCAGAG CACGAGGATGACGAGAGTTTCATCAGTGGCGATGGGGATGACCCAAAGCGCGGTCGCAGTCGCTGGAGGCATGTT CACGGCTGGATGCGAGGCTGGATCCCCTCTGCTTCGCCCCGGAGGGACTCAAGGGAATCTTCGGTTTCTCAAGAG GGACAGGCTTTGTTGGGCGCAGAGCGCGGCCGCTACGGCACTGTTTGA
Gene	>Pro_DTO377G3_2\|g2556.t1 ATGTCTCCTCCACTATTACAGTACCTCCTCTCTGGGACCCTTCCTGACCACTGTGAACCGACCTCGCCCTTCCTG ACCGCCGTCTCCTCGCATCTCCACATCTGCATCCCCACTCCTCTCGCGGCGATCTCTTCCGTCCTTGGGACCCTC AGCATAGTCTCATGGCTTTTCGCACAACTACCCCAGATTTATAAGAACTACCAAGTGCAGTCGACGTCAGGCTTA TCGATATTTTTCTTGGTAATCTGGTGCCTTGGTGACGCGAGCAACCTCGTTGGAGCGCTATATACCCGACAGGCA GGGTGGCAGGTCGTGATTGCCAGTTATTACGTCTTCGTTGATATCGCTCTGGTATTCCAGTTTTTCTGGTACACT CATTACAAACCTCGCCAGAATGATTCGTATGACGACTTGTCACATTCGCATGACTCGGCTCGTCGAAACATCATT CAAGGCGTGCCTCCTCCAGGCCACGACTCAGACAATCAGACCCCGGCTCCCGTCAACATGAACAACAAGCACCCC GAGGCCAAGGATGGGGGCTTCCAGGCCGGGTCAGCACTCGACTCGACCCATGTGCCAACAGCGTCATACTCAAAC GAGAAATTGAGCTCATCGCGTCGATCTGTAAGGTTGGGCAGTAGCATGCAGAGCCCGCCATTCGCACTGCCCCGG ACGATGCTCATGGCATCACTCCTTTGTGCCGTACTCGCAAACGCTGCCCCCACCGACAAGTCCGACACGTTCATT TCGGAAGCACCGCGGGAGACCATCGTCGAGATCATCGGCCGCGTCTTCTCTTGGATGTCAACAATCCTGTATCTC GGCTCACGCCCTCCACAGCTATACAAAAACTACCAGCGCAAGAGCACTGAAGGTCTTTCCCCACTGCTCTTCATG GCCGCATTCTGTGGGAACCTGTTCTACTCCAGCTCGATGCTCACCAACCCGAATGCTTGGTCCGATTTCTCCCCA TATGGCGGCGGCGGCTGGGCTGACAACCACGGCAATAACAGATTGGAATGGATTGGACGCGCTACGCCGTTCTTC TTGGGTGCATTCGGTGTGTTGGGACTGGACGGGTTCATGGGTGTTCAGTTTCTCATGTATGGCGATGGTCCAGAG CACGAGGATGACGAGAGTTTCATCAGTGGCGATGGGGATGACCCAAAGCGCGGTCGCAGTCGCTGGAGGCATGTT CACGGCTGGATGCGAGGCTGGATCCCCTCTGCTTCGCCCCGGAGGGACTCAAGGGAATCTTCGGTTTCTCAAGAG GGACAGGCTTTGTTGGGCGCAGAGCGCGGCCGCTACGGCACTGTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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