Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2556.t1
Gene name
Locationscaffold_03:333937..335260
Strand+
Gene length (bp)1323
Transcript length (bp)1323
Coding sequence length (bp)1323
Protein length (aa) 441

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04193 PQ-loop PQ loop repeat 6.2E-18 43 99
PF04193 PQ-loop PQ loop repeat 2.3E-19 262 321

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.5

Transmembrane Domains

Domain # Start End Length
1 36 58 22
2 75 97 22
3 102 124 22
4 293 315 22
5 342 359 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2556.t1
MSPPLLQYLLSGTLPDHCEPTSPFLTAVSSHLHICIPTPLAAISSVLGTLSIVSWLFAQLPQIYKNYQVQSTSGL
SIFFLVIWCLGDASNLVGALYTRQAGWQVVIASYYVFVDIALVFQFFWYTHYKPRQNDSYDDLSHSHDSARRNII
QGVPPPGHDSDNQTPAPVNMNNKHPEAKDGGFQAGSALDSTHVPTASYSNEKLSSSRRSVRLGSSMQSPPFALPR
TMLMASLLCAVLANAAPTDKSDTFISEAPRETIVEIIGRVFSWMSTILYLGSRPPQLYKNYQRKSTEGLSPLLFM
AAFCGNLFYSSSMLTNPNAWSDFSPYGGGGWADNHGNNRLEWIGRATPFFLGAFGVLGLDGFMGVQFLMYGDGPE
HEDDESFISGDGDDPKRGRSRWRHVHGWMRGWIPSASPRRDSRESSVSQEGQALLGAERGRYGTV*
Coding >Pro_DTO377G3_2|g2556.t1
ATGTCTCCTCCACTATTACAGTACCTCCTCTCTGGGACCCTTCCTGACCACTGTGAACCGACCTCGCCCTTCCTG
ACCGCCGTCTCCTCGCATCTCCACATCTGCATCCCCACTCCTCTCGCGGCGATCTCTTCCGTCCTTGGGACCCTC
AGCATAGTCTCATGGCTTTTCGCACAACTACCCCAGATTTATAAGAACTACCAAGTGCAGTCGACGTCAGGCTTA
TCGATATTTTTCTTGGTAATCTGGTGCCTTGGTGACGCGAGCAACCTCGTTGGAGCGCTATATACCCGACAGGCA
GGGTGGCAGGTCGTGATTGCCAGTTATTACGTCTTCGTTGATATCGCTCTGGTATTCCAGTTTTTCTGGTACACT
CATTACAAACCTCGCCAGAATGATTCGTATGACGACTTGTCACATTCGCATGACTCGGCTCGTCGAAACATCATT
CAAGGCGTGCCTCCTCCAGGCCACGACTCAGACAATCAGACCCCGGCTCCCGTCAACATGAACAACAAGCACCCC
GAGGCCAAGGATGGGGGCTTCCAGGCCGGGTCAGCACTCGACTCGACCCATGTGCCAACAGCGTCATACTCAAAC
GAGAAATTGAGCTCATCGCGTCGATCTGTAAGGTTGGGCAGTAGCATGCAGAGCCCGCCATTCGCACTGCCCCGG
ACGATGCTCATGGCATCACTCCTTTGTGCCGTACTCGCAAACGCTGCCCCCACCGACAAGTCCGACACGTTCATT
TCGGAAGCACCGCGGGAGACCATCGTCGAGATCATCGGCCGCGTCTTCTCTTGGATGTCAACAATCCTGTATCTC
GGCTCACGCCCTCCACAGCTATACAAAAACTACCAGCGCAAGAGCACTGAAGGTCTTTCCCCACTGCTCTTCATG
GCCGCATTCTGTGGGAACCTGTTCTACTCCAGCTCGATGCTCACCAACCCGAATGCTTGGTCCGATTTCTCCCCA
TATGGCGGCGGCGGCTGGGCTGACAACCACGGCAATAACAGATTGGAATGGATTGGACGCGCTACGCCGTTCTTC
TTGGGTGCATTCGGTGTGTTGGGACTGGACGGGTTCATGGGTGTTCAGTTTCTCATGTATGGCGATGGTCCAGAG
CACGAGGATGACGAGAGTTTCATCAGTGGCGATGGGGATGACCCAAAGCGCGGTCGCAGTCGCTGGAGGCATGTT
CACGGCTGGATGCGAGGCTGGATCCCCTCTGCTTCGCCCCGGAGGGACTCAAGGGAATCTTCGGTTTCTCAAGAG
GGACAGGCTTTGTTGGGCGCAGAGCGCGGCCGCTACGGCACTGTTTGA
Transcript >Pro_DTO377G3_2|g2556.t1
ATGTCTCCTCCACTATTACAGTACCTCCTCTCTGGGACCCTTCCTGACCACTGTGAACCGACCTCGCCCTTCCTG
ACCGCCGTCTCCTCGCATCTCCACATCTGCATCCCCACTCCTCTCGCGGCGATCTCTTCCGTCCTTGGGACCCTC
AGCATAGTCTCATGGCTTTTCGCACAACTACCCCAGATTTATAAGAACTACCAAGTGCAGTCGACGTCAGGCTTA
TCGATATTTTTCTTGGTAATCTGGTGCCTTGGTGACGCGAGCAACCTCGTTGGAGCGCTATATACCCGACAGGCA
GGGTGGCAGGTCGTGATTGCCAGTTATTACGTCTTCGTTGATATCGCTCTGGTATTCCAGTTTTTCTGGTACACT
CATTACAAACCTCGCCAGAATGATTCGTATGACGACTTGTCACATTCGCATGACTCGGCTCGTCGAAACATCATT
CAAGGCGTGCCTCCTCCAGGCCACGACTCAGACAATCAGACCCCGGCTCCCGTCAACATGAACAACAAGCACCCC
GAGGCCAAGGATGGGGGCTTCCAGGCCGGGTCAGCACTCGACTCGACCCATGTGCCAACAGCGTCATACTCAAAC
GAGAAATTGAGCTCATCGCGTCGATCTGTAAGGTTGGGCAGTAGCATGCAGAGCCCGCCATTCGCACTGCCCCGG
ACGATGCTCATGGCATCACTCCTTTGTGCCGTACTCGCAAACGCTGCCCCCACCGACAAGTCCGACACGTTCATT
TCGGAAGCACCGCGGGAGACCATCGTCGAGATCATCGGCCGCGTCTTCTCTTGGATGTCAACAATCCTGTATCTC
GGCTCACGCCCTCCACAGCTATACAAAAACTACCAGCGCAAGAGCACTGAAGGTCTTTCCCCACTGCTCTTCATG
GCCGCATTCTGTGGGAACCTGTTCTACTCCAGCTCGATGCTCACCAACCCGAATGCTTGGTCCGATTTCTCCCCA
TATGGCGGCGGCGGCTGGGCTGACAACCACGGCAATAACAGATTGGAATGGATTGGACGCGCTACGCCGTTCTTC
TTGGGTGCATTCGGTGTGTTGGGACTGGACGGGTTCATGGGTGTTCAGTTTCTCATGTATGGCGATGGTCCAGAG
CACGAGGATGACGAGAGTTTCATCAGTGGCGATGGGGATGACCCAAAGCGCGGTCGCAGTCGCTGGAGGCATGTT
CACGGCTGGATGCGAGGCTGGATCCCCTCTGCTTCGCCCCGGAGGGACTCAAGGGAATCTTCGGTTTCTCAAGAG
GGACAGGCTTTGTTGGGCGCAGAGCGCGGCCGCTACGGCACTGTTTGA
Gene >Pro_DTO377G3_2|g2556.t1
ATGTCTCCTCCACTATTACAGTACCTCCTCTCTGGGACCCTTCCTGACCACTGTGAACCGACCTCGCCCTTCCTG
ACCGCCGTCTCCTCGCATCTCCACATCTGCATCCCCACTCCTCTCGCGGCGATCTCTTCCGTCCTTGGGACCCTC
AGCATAGTCTCATGGCTTTTCGCACAACTACCCCAGATTTATAAGAACTACCAAGTGCAGTCGACGTCAGGCTTA
TCGATATTTTTCTTGGTAATCTGGTGCCTTGGTGACGCGAGCAACCTCGTTGGAGCGCTATATACCCGACAGGCA
GGGTGGCAGGTCGTGATTGCCAGTTATTACGTCTTCGTTGATATCGCTCTGGTATTCCAGTTTTTCTGGTACACT
CATTACAAACCTCGCCAGAATGATTCGTATGACGACTTGTCACATTCGCATGACTCGGCTCGTCGAAACATCATT
CAAGGCGTGCCTCCTCCAGGCCACGACTCAGACAATCAGACCCCGGCTCCCGTCAACATGAACAACAAGCACCCC
GAGGCCAAGGATGGGGGCTTCCAGGCCGGGTCAGCACTCGACTCGACCCATGTGCCAACAGCGTCATACTCAAAC
GAGAAATTGAGCTCATCGCGTCGATCTGTAAGGTTGGGCAGTAGCATGCAGAGCCCGCCATTCGCACTGCCCCGG
ACGATGCTCATGGCATCACTCCTTTGTGCCGTACTCGCAAACGCTGCCCCCACCGACAAGTCCGACACGTTCATT
TCGGAAGCACCGCGGGAGACCATCGTCGAGATCATCGGCCGCGTCTTCTCTTGGATGTCAACAATCCTGTATCTC
GGCTCACGCCCTCCACAGCTATACAAAAACTACCAGCGCAAGAGCACTGAAGGTCTTTCCCCACTGCTCTTCATG
GCCGCATTCTGTGGGAACCTGTTCTACTCCAGCTCGATGCTCACCAACCCGAATGCTTGGTCCGATTTCTCCCCA
TATGGCGGCGGCGGCTGGGCTGACAACCACGGCAATAACAGATTGGAATGGATTGGACGCGCTACGCCGTTCTTC
TTGGGTGCATTCGGTGTGTTGGGACTGGACGGGTTCATGGGTGTTCAGTTTCTCATGTATGGCGATGGTCCAGAG
CACGAGGATGACGAGAGTTTCATCAGTGGCGATGGGGATGACCCAAAGCGCGGTCGCAGTCGCTGGAGGCATGTT
CACGGCTGGATGCGAGGCTGGATCCCCTCTGCTTCGCCCCGGAGGGACTCAAGGGAATCTTCGGTTTCTCAAGAG
GGACAGGCTTTGTTGGGCGCAGAGCGCGGCCGCTACGGCACTGTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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