Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2546.t1
Gene name
Locationscaffold_03:298896..300188
Strand-
Gene length (bp)1292
Transcript length (bp)1134
Coding sequence length (bp)1134
Protein length (aa) 378

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13230 GATase_4 Glutamine amidotransferases class-II 1.8E-11 44 166
PF13522 GATase_6 Glutamine amidotransferase domain 1.5E-07 79 157

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2546.t1
MCRFLIYKGRNEIRLSKLITEPSHSILTQSYDSRLRLDNRRPVNGDGFGVGFYTDPKLGPEPCIFTSTLPAWNCE
NLERLASKTCSNLIFAHVRATTEGSLAENNCHPFQHQSLMWMHNGGIGGWSYIKRTLGSSLADKWYLGVKGGTDS
EWAFALFLDLLEKEGVDPSSDPGPEGFGQALLRRVLMKTIARINEMVKEIPKKYNVTGVETRSLLNFAVTDGHTV
VCTRYISSKTDEPASLYFSSGTKWKEGETKGHFKMERHDKGADIVLVASEPITFERHNWVSVPTNSVVTIHKQTV
MLHPILDEFYGENLNHDRSSCFAVSKGLVSTAPGTTVRPTNTQESCAPSATCNAIGNTNSGMESLRSGHVTECAV
SY*
Coding >Pro_DTO377G3_2|g2546.t1
ATGTGTCGATTCCTGATTTACAAAGGGCGAAATGAGATCCGTCTCAGTAAGCTGATAACCGAGCCAAGTCATTCA
ATCCTCACTCAATCATATGATTCACGCCTGAGACTGGACAATCGCCGTCCTGTCAACGGTGACGGGTTTGGTGTG
GGCTTCTACACAGACCCCAAGCTTGGACCAGAACCTTGCATCTTTACTTCAACACTGCCGGCCTGGAATTGTGAG
AATCTAGAGCGACTCGCTTCCAAAACATGCTCAAACCTGATTTTTGCGCATGTACGCGCAACAACCGAGGGTTCT
CTTGCCGAAAACAATTGCCACCCGTTCCAGCACCAGTCCTTGATGTGGATGCACAATGGCGGTATCGGTGGGTGG
AGCTACATCAAGCGTACGCTGGGAAGCTCACTCGCCGACAAGTGGTACCTGGGTGTGAAAGGTGGCACCGACAGT
GAGTGGGCATTCGCCCTCTTCCTTGACTTGCTTGAAAAGGAAGGAGTGGATCCAAGCTCTGACCCCGGCCCTGAG
GGATTCGGGCAGGCTCTCCTACGTCGTGTTTTGATGAAGACCATTGCCAGAATCAATGAAATGGTCAAAGAAATT
CCAAAGAAATATAATGTCACCGGAGTGGAGACTCGGAGTTTGTTGAACTTTGCTGTGACCGATGGCCATACTGTT
GTTTGCACTCGATACATCAGCAGCAAAACAGATGAGCCTGCCAGCTTGTATTTCTCTTCTGGTACTAAGTGGAAG
GAAGGTGAAACGAAAGGACACTTCAAGATGGAGCGACACGATAAAGGTGCTGATATTGTCCTCGTGGCTAGTGAG
CCAATCACATTTGAACGACACAATTGGGTGTCAGTCCCAACAAATTCAGTTGTCACAATTCACAAGCAGACTGTT
ATGCTTCACCCAATTCTTGATGAATTCTATGGCGAAAACCTCAACCACGACCGATCTTCCTGCTTTGCTGTATCC
AAGGGACTTGTTAGCACCGCTCCTGGGACAACCGTTCGACCAACGAATACGCAGGAGTCTTGCGCCCCTTCAGCA
ACTTGCAATGCTATCGGAAACACCAACAGTGGTATGGAAAGCTTACGATCTGGTCATGTTACCGAATGTGCCGTG
TCGTACTAA
Transcript >Pro_DTO377G3_2|g2546.t1
ATGTGTCGATTCCTGATTTACAAAGGGCGAAATGAGATCCGTCTCAGTAAGCTGATAACCGAGCCAAGTCATTCA
ATCCTCACTCAATCATATGATTCACGCCTGAGACTGGACAATCGCCGTCCTGTCAACGGTGACGGGTTTGGTGTG
GGCTTCTACACAGACCCCAAGCTTGGACCAGAACCTTGCATCTTTACTTCAACACTGCCGGCCTGGAATTGTGAG
AATCTAGAGCGACTCGCTTCCAAAACATGCTCAAACCTGATTTTTGCGCATGTACGCGCAACAACCGAGGGTTCT
CTTGCCGAAAACAATTGCCACCCGTTCCAGCACCAGTCCTTGATGTGGATGCACAATGGCGGTATCGGTGGGTGG
AGCTACATCAAGCGTACGCTGGGAAGCTCACTCGCCGACAAGTGGTACCTGGGTGTGAAAGGTGGCACCGACAGT
GAGTGGGCATTCGCCCTCTTCCTTGACTTGCTTGAAAAGGAAGGAGTGGATCCAAGCTCTGACCCCGGCCCTGAG
GGATTCGGGCAGGCTCTCCTACGTCGTGTTTTGATGAAGACCATTGCCAGAATCAATGAAATGGTCAAAGAAATT
CCAAAGAAATATAATGTCACCGGAGTGGAGACTCGGAGTTTGTTGAACTTTGCTGTGACCGATGGCCATACTGTT
GTTTGCACTCGATACATCAGCAGCAAAACAGATGAGCCTGCCAGCTTGTATTTCTCTTCTGGTACTAAGTGGAAG
GAAGGTGAAACGAAAGGACACTTCAAGATGGAGCGACACGATAAAGGTGCTGATATTGTCCTCGTGGCTAGTGAG
CCAATCACATTTGAACGACACAATTGGGTGTCAGTCCCAACAAATTCAGTTGTCACAATTCACAAGCAGACTGTT
ATGCTTCACCCAATTCTTGATGAATTCTATGGCGAAAACCTCAACCACGACCGATCTTCCTGCTTTGCTGTATCC
AAGGGACTTGTTAGCACCGCTCCTGGGACAACCGTTCGACCAACGAATACGCAGGAGTCTTGCGCCCCTTCAGCA
ACTTGCAATGCTATCGGAAACACCAACAGTGGTATGGAAAGCTTACGATCTGGTCATGTTACCGAATGTGCCGTG
TCGTACTAA
Gene >Pro_DTO377G3_2|g2546.t1
ATGTGTCGATTCCTGGTAAGGTCCATCCCTCCAAGCATTGGGCCCGAAGCTAATATCTCGATTAGATTTACAAAG
GGCGAAATGAGATCCGTCTCAGTAAGCTGATAACCGAGCCAAGTCATTCAATCCTCACTCAATCATATGATTCAC
GCCTGAGACTGGTAAGTACCCACATAATTAGCATATCGCAACACGCTGACATGTAATATCAAGGACAATCGCCGT
CCTGTCAACGGTGACGGGTTTGGTGTGGGCTTCTACACAGACCCCAAGCTTGGACCAGAACCTTGCATCTTTACT
TCAACACTGCCGGCCTGGAATTGTGAGAATCTAGAGCGACTCGCTTCCAAAACATGCTCAAACCTGATTTTTGCG
CATGTACGCGCAACAACCGAGGGTTCTCTTGCCGAAAACAATTGCCACCCGTTCCAGCACCAGTCCTTGATGTGG
ATGCACAATGGCGGTATCGGTGGGTGGAGCTACATCAAGCGTACGCTGGGAAGCTCACTCGCCGACAAGTGGTAC
CTGGGTGTGAAAGGTGGCACCGACAGTGAGTGGGCATTCGCCCTCTTCCTTGACTTGCTTGAAAAGGAAGGAGTG
GATCCAAGCTCTGACCCCGGCCCTGAGGGATTCGGGCAGGCTCTCCTACGTCGTGTTTTGATGAAGACCATTGCC
AGAATCAATGAAATGGTCAAAGAAATTCCAAAGAAATATAATGTCACCGGAGTGGAGACTCGGAGTTTGTTGAAC
TTTGCTGTGACCGATGGCCATACTGTTGTTTGCACTCGATACATCAGCAGCAAAACAGATGAGCCTGCCAGCTTG
TATTTCTCTTCTGGTACTAAGTGGAAGGAAGGTGAAACGAAAGGACACTTCAAGATGGAGCGACACGATAAAGGT
GCTGATATTGTCCTCGTGGCTAGTGAGCCAATCACATTTGAACGACGTGAGAACCCTTTCTCTCTCTCTATGCCT
ATGAACATATGCTAATTTTATACGTAGACAATTGGGTGTCAGTCCCAACAAATTCAGTTGTCACAATTCACAAGC
AGACTGTTATGCTTCACCCAATTCTTGATGAATTCTATGGCGAAAACCTCAACCACGACCGATCTTCCTGCTTTG
CTGTATCCAAGGGACTTGTTAGCACCGCTCCTGGGACAACCGTTCGACCAACGAATACGCAGGAGTCTTGCGCCC
CTTCAGCAACTTGCAATGCTATCGGAAACACCAACAGTGGTATGGAAAGCTTACGATCTGGTCATGTTACCGAAT
GTGCCGTGTCGTACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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