Protein ID | Pro_DTO377G3_2|g2528.t1 |
Gene name | |
Location | scaffold_03:257048..258618 |
Strand | - |
Gene length (bp) | 1570 |
Transcript length (bp) | 1323 |
Coding sequence length (bp) | 1323 |
Protein length (aa) | 441 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00009 | GTP_EFTU | Elongation factor Tu GTP binding domain | 2.6E-55 | 49 | 242 |
PF03143 | GTP_EFTU_D3 | Elongation factor Tu C-terminal domain | 1.2E-25 | 343 | 438 |
PF03144 | GTP_EFTU_D2 | Elongation factor Tu domain 2 | 1.9E-17 | 266 | 337 |
PF01926 | MMR_HSR1 | 50S ribosome-binding GTPase | 2.0E-05 | 54 | 173 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005525 | GTP binding | Yes |
GO:0003924 | GTPase activity | Yes |
GO:0036094 | small molecule binding | No |
GO:0003824 | catalytic activity | No |
GO:0035639 | purine ribonucleoside triphosphate binding | No |
GO:0043167 | ion binding | No |
GO:0017076 | purine nucleotide binding | No |
GO:0097367 | carbohydrate derivative binding | No |
GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | No |
GO:0016462 | pyrophosphatase activity | No |
GO:0000166 | nucleotide binding | No |
GO:0005488 | binding | No |
GO:0017111 | nucleoside-triphosphatase activity | No |
GO:0003674 | molecular_function | No |
GO:0032561 | guanyl ribonucleotide binding | No |
GO:0019001 | guanyl nucleotide binding | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0032553 | ribonucleotide binding | No |
GO:0032555 | purine ribonucleotide binding | No |
GO:0016787 | hydrolase activity | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0043168 | anion binding | No |
GO:0016817 | hydrolase activity, acting on acid anhydrides | No |
GO:1901265 | nucleoside phosphate binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 20 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g2528.t1 MSSISRSLNLLARTSRSSLLRPTTVNPVHHVFSNKVTGRGLATAFERNKPHVNIGTIGHVDHGKTTLTAAITKHQ ASKGLANFLDYASIDKAPEERKRGITISTAHIEFATEDRHYAHVDCPGHADYIKNMITGAANMDGAIVVVAASDG QMPQTREHLLLARQVGVQKIVVFVNKVDAVEDPEMLELVELEMRELLSSYGFEGEETPIVFGSALCALENRRPEI GTEQIEKLMHAVDTWIPTPERDMDKPFLMSVEEVFSIPGRGTVVSGRVERGLLKKDTEVEIVGATDSGNPIKTKV TDIETFKKSCDESRAGDNSGLLLRGVRREDIRRGMVVAAPNSTKANNKFLVSMYVLTEAEGGRRTGFGANYRPQV YIRTADEAGDLSFPDGDMARRVQPGDNVEMILKTHHPVAAEPGQRFNIREGGRTVATGLITRVVE* |
Coding | >Pro_DTO377G3_2|g2528.t1 ATGTCGAGCATCTCTCGTTCATTGAACCTCCTGGCGCGCACTAGCCGGTCCTCCCTGCTGCGTCCGACTACCGTC AACCCCGTCCACCATGTCTTCAGCAACAAGGTGACCGGCCGTGGGTTGGCCACTGCTTTCGAGCGTAACAAGCCC CACGTTAACATTGGTACTATTGGCCACGTCGATCACGGCAAGACCACCCTGACTGCCGCTATCACCAAGCACCAG GCCTCTAAGGGTCTTGCCAACTTCCTCGACTATGCCTCCATTGACAAGGCCCCTGAGGAGCGCAAGCGTGGTATT ACCATCTCGACTGCCCACATTGAATTTGCGACTGAGGACCGTCACTACGCCCATGTCGACTGCCCCGGTCACGCC GATTATATTAAGAACATGATTACCGGTGCTGCCAACATGGATGGTGCCATTGTCGTCGTTGCTGCGTCCGATGGT CAGATGCCCCAGACCCGTGAGCACTTGCTGCTTGCCCGCCAGGTTGGTGTTCAGAAGATTGTTGTGTTCGTTAAC AAGGTCGACGCTGTCGAGGACCCTGAGATGCTTGAGCTCGTCGAGCTCGAGATGCGTGAGCTCCTCTCCTCTTAC GGATTCGAGGGTGAGGAGACTCCTATCGTCTTCGGCTCTGCCCTCTGCGCTCTGGAGAATCGCCGCCCCGAAATT GGTACTGAGCAGATTGAGAAGCTCATGCATGCCGTCGACACCTGGATCCCTACCCCCGAGCGTGATATGGATAAG CCTTTCCTTATGTCCGTTGAGGAAGTCTTCTCTATTCCTGGCCGTGGTACTGTTGTCTCTGGCCGTGTCGAACGT GGTCTCCTGAAGAAGGATACTGAGGTTGAAATCGTCGGTGCAACCGACTCCGGCAACCCCATCAAGACCAAGGTT ACGGATATTGAGACCTTCAAAAAGTCCTGTGACGAGTCCCGTGCTGGTGACAACTCCGGTCTCCTGCTCCGTGGT GTCCGTCGTGAGGACATCCGCCGCGGCATGGTCGTTGCTGCCCCTAACAGCACCAAGGCTAACAACAAGTTCCTC GTGTCCATGTACGTTCTGACCGAGGCCGAGGGTGGTCGCCGTACTGGTTTCGGTGCCAACTACCGGCCCCAGGTC TACATCCGTACTGCTGATGAGGCTGGTGATCTCAGCTTCCCTGATGGCGACATGGCCAGACGTGTCCAACCCGGT GACAACGTCGAGATGATCCTCAAGACCCACCACCCTGTTGCTGCGGAGCCCGGTCAGCGTTTCAACATCCGCGAG GGAGGCCGCACCGTTGCCACTGGTCTGATCACCCGTGTCGTCGAGTAA |
Transcript | >Pro_DTO377G3_2|g2528.t1 ATGTCGAGCATCTCTCGTTCATTGAACCTCCTGGCGCGCACTAGCCGGTCCTCCCTGCTGCGTCCGACTACCGTC AACCCCGTCCACCATGTCTTCAGCAACAAGGTGACCGGCCGTGGGTTGGCCACTGCTTTCGAGCGTAACAAGCCC CACGTTAACATTGGTACTATTGGCCACGTCGATCACGGCAAGACCACCCTGACTGCCGCTATCACCAAGCACCAG GCCTCTAAGGGTCTTGCCAACTTCCTCGACTATGCCTCCATTGACAAGGCCCCTGAGGAGCGCAAGCGTGGTATT ACCATCTCGACTGCCCACATTGAATTTGCGACTGAGGACCGTCACTACGCCCATGTCGACTGCCCCGGTCACGCC GATTATATTAAGAACATGATTACCGGTGCTGCCAACATGGATGGTGCCATTGTCGTCGTTGCTGCGTCCGATGGT CAGATGCCCCAGACCCGTGAGCACTTGCTGCTTGCCCGCCAGGTTGGTGTTCAGAAGATTGTTGTGTTCGTTAAC AAGGTCGACGCTGTCGAGGACCCTGAGATGCTTGAGCTCGTCGAGCTCGAGATGCGTGAGCTCCTCTCCTCTTAC GGATTCGAGGGTGAGGAGACTCCTATCGTCTTCGGCTCTGCCCTCTGCGCTCTGGAGAATCGCCGCCCCGAAATT GGTACTGAGCAGATTGAGAAGCTCATGCATGCCGTCGACACCTGGATCCCTACCCCCGAGCGTGATATGGATAAG CCTTTCCTTATGTCCGTTGAGGAAGTCTTCTCTATTCCTGGCCGTGGTACTGTTGTCTCTGGCCGTGTCGAACGT GGTCTCCTGAAGAAGGATACTGAGGTTGAAATCGTCGGTGCAACCGACTCCGGCAACCCCATCAAGACCAAGGTT ACGGATATTGAGACCTTCAAAAAGTCCTGTGACGAGTCCCGTGCTGGTGACAACTCCGGTCTCCTGCTCCGTGGT GTCCGTCGTGAGGACATCCGCCGCGGCATGGTCGTTGCTGCCCCTAACAGCACCAAGGCTAACAACAAGTTCCTC GTGTCCATGTACGTTCTGACCGAGGCCGAGGGTGGTCGCCGTACTGGTTTCGGTGCCAACTACCGGCCCCAGGTC TACATCCGTACTGCTGATGAGGCTGGTGATCTCAGCTTCCCTGATGGCGACATGGCCAGACGTGTCCAACCCGGT GACAACGTCGAGATGATCCTCAAGACCCACCACCCTGTTGCTGCGGAGCCCGGTCAGCGTTTCAACATCCGCGAG GGAGGCCGCACCGTTGCCACTGGTCTGATCACCCGTGTCGTCGAGTAA |
Gene | >Pro_DTO377G3_2|g2528.t1 ATGTCGAGCATCTCTCGTTCATTGAACCTCCTGGCGCGCACTAGCCGGTCCTCCCTGCTGCGTCCGACTACCGTC AACCCCGTCCACCATGTCTTCAGCAACAAGGTGACCGGCCGTGGGTTGGCCACTGCTTTCGAGCGTAACAAGCCC CACGTTAACATTGGTATGATCCTGTCGTTGGCGCATAATCCATCTCCACGCTAAAAGGTTGTTGCTTAGGTACTA TTGGCCACGTCGATCACGGCAAGGTAAGCTATTCGCAACTTGTTCCGACATTTCCGCCATCTTCGAACATGAGAT TTAACCCGTCCGCCCATAGACCACCCTGACTGCCGCTATCACCAAGCACCAGGCCTCTAAGGGTCTTGCCAACTT CCTCGACTATGCCTCCATTGACAAGGCCCCTGAGGAGCGCAAGCGTGGTATTACCATCTCGACTGCCCACATTGA ATTTGCGACTGAGGACCGTCACTACGCCCATGTCGACTGCCCCGGTCACGCCGATTATATTAAGAACATGATTAC CGGTGCTGCCAACATGGATGGTGCCATTGTCGTCGTTGCTGCGTCCGATGGTCAGATGTACGTCCCCCGGTCTAA AAACCTAGTTTGATGAGTGTGCTGACGCAAATCACGCATTAGGCCCCAGACCCGTGAGCACTTGCTGCTTGCCCG CCAGGTTGGTGTTCAGAAGATTGTTGTGTTCGTTAACAAGGTCGACGCTGTCGAGGACCCTGAGATGCTTGAGCT CGTCGAGCTCGAGATGCGTGAGCTCCTCTCCTCTTACGGATTCGAGGGTGAGGAGACTCCTATCGTCTTCGGCTC TGCCCTCTGCGCTCTGGAGAATCGCCGCCCCGAAATTGGTACTGAGCAGATTGAGAAGCTCATGCATGCCGTCGA CACCTGGATCCCTACCCCCGAGCGTGATATGGATAAGCCTTTCCTTATGTCCGTTGAGGAAGTCTTCTCTATTCC TGGCCGTGGTACTGTTGTCTCTGGCCGTGTCGAACGTGGTCTCCTGAAGAAGGATACTGAGGTTGAAATCGTCGG TGCAACCGACTCCGGCAACCCCATCAAGACCAAGGTTACGGATATTGAGACCTTCAAAAAGTCCTGTGACGAGTC CCGTGCTGGTGACAACTCCGGTCTCCTGCTCCGTGGTGTCCGTCGTGAGGACATCCGCCGCGGCATGGTCGTTGC TGCCCCTAACAGCACCAAGGCTAACAACAAGTTCCTCGTGTCCATGTACGTTCTGACCGAGGCCGAGGGTGGTCG CCGTACTGGTTTCGGTGCCAACTACCGGCCCCAGGTCTACATCCGTACTGCTGGTAAGTTCAATTTCCACTGATA TGATATCAAATCGATAAGGGATGCTAACTATGCTCTAGATGAGGCTGGTGATCTCAGCTTCCCTGATGGCGACAT GGCCAGACGTGTCCAACCCGGTGACAACGTCGAGATGATCCTCAAGACCCACCACCCTGTTGCTGCGGAGCCCGG TCAGCGTTTCAACATCCGCGAGGGAGGCCGCACCGTTGCCACTGGTCTGATCACCCGTGTCGTCGAGTAA |