Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2508.t1
Gene name
Locationscaffold_03:211407..212849
Strand-
Gene length (bp)1442
Transcript length (bp)1338
Coding sequence length (bp)1338
Protein length (aa) 446

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16717 RAC_head Ribosome-associated complex head domain 1.5E-30 346 442
PF00226 DnaJ DnaJ domain 2.9E-16 101 169

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2508.t1
MAAAQVVDITLPTLPQGWAGEKDFKIVGALSGATKRNVEPVGPHFLAHARRSRHNRTFSEDERLQAQNNVKKTET
EEDDDISEDEDPVMLAREAKDWKGQDHYAVLGLKKYRWRATPEQIKRAHRKKVLRHHPDKKAAQGNSDENDSFFK
CIQKATDLLLDPTRRRQFDSVDDNADVEPPTKKLTGSKFYKAWGPVFVAEGRFSNKQPVPTLGDENSTQEHVETF
YNFWYNVDSWRTFEYLDEDVPDDGESRDQKRHVEKKNANARRKRKTEDTVRLRELVDECLASDERIKKFRQQARA
GKDAKRLAKEEEMRRLKEEKEKAKAAEEQRKKDAEEAAKADREKNKKAKEAAKNASKKNKRILKGSVKDVNYFAA
GEPTPADIDNVLSDVDLIMAKIDVDELAVLAEKLTIAGSDGAAVKTAWSGEAKRLVDAGKLKAGEAKVFV*
Coding >Pro_DTO377G3_2|g2508.t1
ATGGCTGCTGCTCAAGTTGTTGACATTACCCTCCCTACCTTGCCTCAGGGCTGGGCTGGTGAGAAGGATTTCAAG
ATTGTCGGTGCTCTGTCCGGTGCCACCAAGCGCAACGTGGAGCCCGTTGGCCCGCACTTCCTGGCTCACGCTCGC
CGATCTCGTCACAACCGTACTTTCTCCGAGGATGAGCGCCTCCAGGCCCAGAACAATGTCAAAAAGACCGAGACT
GAGGAGGATGATGATATCTCTGAAGATGAGGATCCTGTCATGCTTGCCCGTGAGGCCAAGGACTGGAAGGGCCAG
GATCACTACGCCGTCTTGGGTTTGAAAAAGTACCGCTGGCGTGCAACCCCCGAGCAGATCAAGCGGGCTCACCGC
AAGAAGGTCCTGCGTCACCACCCTGACAAGAAGGCCGCCCAGGGTAACAGCGATGAGAACGACAGCTTCTTCAAG
TGTATCCAGAAGGCTACCGATCTGCTTCTCGACCCTACTCGTCGTCGCCAGTTCGATTCCGTCGACGACAACGCT
GACGTTGAGCCCCCCACTAAGAAGCTCACCGGTAGCAAGTTCTACAAGGCCTGGGGCCCTGTTTTCGTTGCAGAG
GGTCGCTTCTCCAATAAGCAGCCTGTGCCCACACTCGGAGACGAGAACAGCACTCAGGAGCATGTCGAGACTTTC
TACAACTTCTGGTACAATGTTGACAGCTGGAGGACTTTCGAGTACCTTGATGAGGATGTGCCTGATGATGGAGAG
AGTCGTGACCAGAAACGTCATGTGGAGAAGAAGAACGCCAATGCCCGCCGCAAGCGCAAGACCGAGGACACCGTT
CGTCTGCGTGAGCTCGTTGACGAGTGTCTCGCTTCCGATGAGCGTATTAAGAAGTTCCGCCAGCAGGCTCGTGCC
GGCAAAGACGCTAAGCGTCTCGCCAAGGAGGAGGAGATGCGTCGTCTCAAGGAGGAGAAGGAGAAAGCCAAGGCC
GCCGAGGAGCAGCGCAAGAAGGACGCTGAGGAGGCCGCCAAGGCTGACCGTGAGAAGAATAAGAAGGCTAAAGAG
GCCGCTAAGAACGCTTCCAAGAAGAACAAGCGTATCCTCAAGGGCTCCGTCAAGGATGTCAACTACTTCGCCGCC
GGTGAGCCCACTCCCGCTGATATCGACAATGTCCTCAGCGATGTCGACCTCATCATGGCCAAGATCGATGTTGAT
GAGCTTGCCGTTCTGGCTGAGAAGCTCACCATTGCCGGCAGTGATGGCGCTGCTGTCAAGACCGCTTGGTCTGGC
GAGGCTAAGCGCCTTGTTGATGCTGGCAAGCTGAAGGCCGGCGAGGCCAAGGTCTTCGTTTAA
Transcript >Pro_DTO377G3_2|g2508.t1
ATGGCTGCTGCTCAAGTTGTTGACATTACCCTCCCTACCTTGCCTCAGGGCTGGGCTGGTGAGAAGGATTTCAAG
ATTGTCGGTGCTCTGTCCGGTGCCACCAAGCGCAACGTGGAGCCCGTTGGCCCGCACTTCCTGGCTCACGCTCGC
CGATCTCGTCACAACCGTACTTTCTCCGAGGATGAGCGCCTCCAGGCCCAGAACAATGTCAAAAAGACCGAGACT
GAGGAGGATGATGATATCTCTGAAGATGAGGATCCTGTCATGCTTGCCCGTGAGGCCAAGGACTGGAAGGGCCAG
GATCACTACGCCGTCTTGGGTTTGAAAAAGTACCGCTGGCGTGCAACCCCCGAGCAGATCAAGCGGGCTCACCGC
AAGAAGGTCCTGCGTCACCACCCTGACAAGAAGGCCGCCCAGGGTAACAGCGATGAGAACGACAGCTTCTTCAAG
TGTATCCAGAAGGCTACCGATCTGCTTCTCGACCCTACTCGTCGTCGCCAGTTCGATTCCGTCGACGACAACGCT
GACGTTGAGCCCCCCACTAAGAAGCTCACCGGTAGCAAGTTCTACAAGGCCTGGGGCCCTGTTTTCGTTGCAGAG
GGTCGCTTCTCCAATAAGCAGCCTGTGCCCACACTCGGAGACGAGAACAGCACTCAGGAGCATGTCGAGACTTTC
TACAACTTCTGGTACAATGTTGACAGCTGGAGGACTTTCGAGTACCTTGATGAGGATGTGCCTGATGATGGAGAG
AGTCGTGACCAGAAACGTCATGTGGAGAAGAAGAACGCCAATGCCCGCCGCAAGCGCAAGACCGAGGACACCGTT
CGTCTGCGTGAGCTCGTTGACGAGTGTCTCGCTTCCGATGAGCGTATTAAGAAGTTCCGCCAGCAGGCTCGTGCC
GGCAAAGACGCTAAGCGTCTCGCCAAGGAGGAGGAGATGCGTCGTCTCAAGGAGGAGAAGGAGAAAGCCAAGGCC
GCCGAGGAGCAGCGCAAGAAGGACGCTGAGGAGGCCGCCAAGGCTGACCGTGAGAAGAATAAGAAGGCTAAAGAG
GCCGCTAAGAACGCTTCCAAGAAGAACAAGCGTATCCTCAAGGGCTCCGTCAAGGATGTCAACTACTTCGCCGCC
GGTGAGCCCACTCCCGCTGATATCGACAATGTCCTCAGCGATGTCGACCTCATCATGGCCAAGATCGATGTTGAT
GAGCTTGCCGTTCTGGCTGAGAAGCTCACCATTGCCGGCAGTGATGGCGCTGCTGTCAAGACCGCTTGGTCTGGC
GAGGCTAAGCGCCTTGTTGATGCTGGCAAGCTGAAGGCCGGCGAGGCCAAGGTCTTCGTTTAA
Gene >Pro_DTO377G3_2|g2508.t1
ATGGCTGCTGCTCAAGTTGTTGACATTACCCTCCCTACCTTGCCTCAGGGCTGGGCTGGTGAGAAGGATTTCAAG
ATTGTCGGTGCTCTGTCCGGTGCCACCAAGCGCAACGTGGAGCCCGTTGGCCCGCACTTCCTGGCTCACGCTCGC
CGAGTAAGTTCTTCAAATTCACTCATTCTTGTTTCGTCAGAATTAACCACATTCTAGTCTCGTCACAACCGTACT
TTCTCCGAGGATGAGCGCCTCCAGGCCCAGAACAATGTCAAAAAGACCGAGACTGAGGAGGATGATGATATCTCT
GAAGATGAGGATCCTGTCATGCTTGCCCGTGAGGCCAAGGACTGGAAGGTCAGTAATGTAACATTTATTCTGGCT
GGTCATTTTCTAACTCCTAGCAGGGCCAGGATCACTACGCCGTCTTGGGTTTGAAAAAGTACCGCTGGCGTGCAA
CCCCCGAGCAGATCAAGCGGGCTCACCGCAAGAAGGTCCTGCGTCACCACCCTGACAAGAAGGCCGCCCAGGGTA
ACAGCGATGAGAACGACAGCTTCTTCAAGTGTATCCAGAAGGCTACCGATCTGCTTCTCGACCCTACTCGTCGTC
GCCAGTTCGATTCCGTCGACGACAACGCTGACGTTGAGCCCCCCACTAAGAAGCTCACCGGTAGCAAGTTCTACA
AGGCCTGGGGCCCTGTTTTCGTTGCAGAGGGTCGCTTCTCCAATAAGCAGCCTGTGCCCACACTCGGAGACGAGA
ACAGCACTCAGGAGCATGTCGAGACTTTCTACAACTTCTGGTACAATGTTGACAGCTGGAGGACTTTCGAGTACC
TTGATGAGGATGTGCCTGATGATGGAGAGAGTCGTGACCAGAAACGTCATGTGGAGAAGAAGAACGCCAATGCCC
GCCGCAAGCGCAAGACCGAGGACACCGTTCGTCTGCGTGAGCTCGTTGACGAGTGTCTCGCTTCCGATGAGCGTA
TTAAGAAGTTCCGCCAGCAGGCTCGTGCCGGCAAAGACGCTAAGCGTCTCGCCAAGGAGGAGGAGATGCGTCGTC
TCAAGGAGGAGAAGGAGAAAGCCAAGGCCGCCGAGGAGCAGCGCAAGAAGGACGCTGAGGAGGCCGCCAAGGCTG
ACCGTGAGAAGAATAAGAAGGCTAAAGAGGCCGCTAAGAACGCTTCCAAGAAGAACAAGCGTATCCTCAAGGGCT
CCGTCAAGGATGTCAACTACTTCGCCGCCGGTGAGCCCACTCCCGCTGATATCGACAATGTCCTCAGCGATGTCG
ACCTCATCATGGCCAAGATCGATGTTGATGAGCTTGCCGTTCTGGCTGAGAAGCTCACCATTGCCGGCAGTGATG
GCGCTGCTGTCAAGACCGCTTGGTCTGGCGAGGCTAAGCGCCTTGTTGATGCTGGCAAGCTGAAGGCCGGCGAGG
CCAAGGTCTTCGTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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