Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2506.t1
Gene name
Locationscaffold_03:207265..208270
Strand+
Gene length (bp)1005
Transcript length (bp)786
Coding sequence length (bp)786
Protein length (aa) 262

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04193 PQ-loop PQ loop repeat 9.2E-18 8 64

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 5 27 22
2 42 59 17
3 96 118 22
4 128 150 22
5 163 185 22
6 189 211 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2506.t1
MDNRVAENVLGTLGAVCWSVQLIPQIVINYRRHDTEGLQGSMMLLWATAGVPLGVYNIVEEFNIALRIQPQILTT
LSLITWAQCLYYGKKYRIMKCCVAVTSLLLLFGGIEAGLIFALQAAKRRGLEWPLILMAVLSACLLAAGVLRHYW
DIYVHRTVRGISFIFVGIDAAGDLFSLLSVLFGSTISALGIIIYGTELTLWVGIFICGGIFNLRPWIKERSEQRN
GNLQEPVSLHPMPSSTSVFRTASASQVTERRPWQSS*
Coding >Pro_DTO377G3_2|g2506.t1
ATGGACAATCGAGTTGCAGAGAATGTTCTCGGTACCCTGGGTGCAGTATGCTGGTCTGTCCAACTCATTCCTCAA
ATAGTCATCAATTACAGGAGACATGACACTGAAGGCCTACAAGGGTCAATGATGCTCTTATGGGCCACCGCAGGG
GTTCCCCTCGGGGTGTACAACATTGTGGAAGAATTCAACATTGCCCTGAGGATTCAGCCTCAAATCCTAACGACA
CTCAGCCTAATTACTTGGGCGCAGTGTCTCTACTATGGAAAGAAATACCGAATCATGAAATGCTGTGTCGCAGTC
ACTTCGCTTCTGCTGCTGTTCGGCGGCATTGAAGCAGGACTTATATTTGCGTTGCAAGCTGCGAAAAGGCGCGGA
TTAGAATGGCCTCTCATCTTGATGGCAGTTTTGAGTGCGTGCCTACTTGCAGCAGGTGTACTGAGACATTACTGG
GATATCTATGTCCACCGGACTGTCCGAGGAATCAGCTTCATTTTTGTCGGTATTGACGCTGCTGGGGACTTGTTT
TCGCTCCTCTCTGTCTTGTTTGGATCGACTATTTCTGCTCTTGGGATAATTATTTATGGAACTGAATTGACCCTT
TGGGTGGGCATATTCATCTGCGGCGGTATTTTCAACCTCCGGCCTTGGATTAAAGAGCGCTCCGAGCAGCGAAAT
GGCAATCTGCAGGAACCGGTGTCCCTACATCCAATGCCATCGTCGACTTCTGTGTTTAGGACCGCATCCGCATCT
CAAGTGACCGAAAGAAGGCCATGGCAGAGTTCGTAA
Transcript >Pro_DTO377G3_2|g2506.t1
ATGGACAATCGAGTTGCAGAGAATGTTCTCGGTACCCTGGGTGCAGTATGCTGGTCTGTCCAACTCATTCCTCAA
ATAGTCATCAATTACAGGAGACATGACACTGAAGGCCTACAAGGGTCAATGATGCTCTTATGGGCCACCGCAGGG
GTTCCCCTCGGGGTGTACAACATTGTGGAAGAATTCAACATTGCCCTGAGGATTCAGCCTCAAATCCTAACGACA
CTCAGCCTAATTACTTGGGCGCAGTGTCTCTACTATGGAAAGAAATACCGAATCATGAAATGCTGTGTCGCAGTC
ACTTCGCTTCTGCTGCTGTTCGGCGGCATTGAAGCAGGACTTATATTTGCGTTGCAAGCTGCGAAAAGGCGCGGA
TTAGAATGGCCTCTCATCTTGATGGCAGTTTTGAGTGCGTGCCTACTTGCAGCAGGTGTACTGAGACATTACTGG
GATATCTATGTCCACCGGACTGTCCGAGGAATCAGCTTCATTTTTGTCGGTATTGACGCTGCTGGGGACTTGTTT
TCGCTCCTCTCTGTCTTGTTTGGATCGACTATTTCTGCTCTTGGGATAATTATTTATGGAACTGAATTGACCCTT
TGGGTGGGCATATTCATCTGCGGCGGTATTTTCAACCTCCGGCCTTGGATTAAAGAGCGCTCCGAGCAGCGAAAT
GGCAATCTGCAGGAACCGGTGTCCCTACATCCAATGCCATCGTCGACTTCTGTGTTTAGGACCGCATCCGCATCT
CAAGTGACCGAAAGAAGGCCATGGCAGAGTTCGTAA
Gene >Pro_DTO377G3_2|g2506.t1
ATGGACAATCGAGTTGCAGAGAATGTTCTCGGTACCCTGGGTGCAGTGGGTTCTATTTCCCGATTTTCCCGATTG
GTAGAGCGAACTAACTATTCTTTAGGTATGCTGGTCTGTCCAAGTATGCGGTTGCTGTGTGCCAATTACTTTTGA
GCCCGCACTGATCACATTATACAGCTCATTCCTCAAATAGTCATCAATTACAGGAGACATGACACTGAAGGCCTA
CAAGGGTCAATGATGCTCTTATGGGCCACCGCAGGGGTTCCCCTCGGGGTGTACAACATTGTGGAAGAATTCAAC
ATTGCCCTGAGGATTCAGCCTCAAATCCTAACGACACTCAGCCTAATTACTTGGGCGCAGTGTCTCTACTATGGA
AAGGTAAACACTTTGCTTTATATTCAACATTATCCTCATAATACTCATATAAACTCAGAAATACCGAATCATGAA
ATGCTGTGTCGCAGTCACTTCGCTTCTGCTGCTGTTCGGCGGCATTGAAGCAGGACTTATATTTGCGTTGCAAGC
TGCGAAAAGGCGCGGATTAGAATGGCCTCTCATCTTGATGGCAGTTTTGAGTGCGTGCCTACTTGCAGCAGGTGT
ACTGAGACATTACTGGGATATCTATGTCCACCGGACTGTCCGAGGAATCAGCTTCATTTTTGTCGGTATTGACGC
TGCTGGGGACTTGTTTTCGCTCCTCTCTGTCTGTAGGTCAACTTCATCGTTAGGTAGAGATGGTCAGCGGCTAAT
ATGCAAGCAGTGTTTGGATCGACTATTTCTGCTCTTGGGATAATTATTTATGGAACTGAATTGACCCTTTGGGTG
GGCATATTCATCTGCGGCGGTATTTTCAACCTCCGGCCTTGGATTAAAGAGCGCTCCGAGCAGCGAAATGGCAAT
CTGCAGGAACCGGTGTCCCTACATCCAATGCCATCGTCGACTTCTGTGTTTAGGACCGCATCCGCATCTCAAGTG
ACCGAAAGAAGGCCATGGCAGAGTTCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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