Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2500.t1
Gene name
Locationscaffold_03:197088..198231
Strand-
Gene length (bp)1143
Transcript length (bp)888
Coding sequence length (bp)888
Protein length (aa) 296

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 1.3E-09 6 148

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2500.t1
MSSIAKTVIATGTSSGLGFETIKQLLQQTQPYSFILGVRDTEKTRVAYDDLKFDTSKHSVSILPLDLLNLKSVQS
FAKQALSELGKRPLNYLFLIAGFLASAEGPGPHGSQWCESYVVNHLAQHYLTHEFAETLSASRSRIVIVSSGAIR
NVRGGDPATLDIDLKANSGANARVVYSASKFTQLLGAHYWRRSLPNCTVVAVSPGLIPNTKLAQHSSLGLSMDMP
DAKTVPEGAQNILRAVTVENLPADPEQIFLTSWGEWWPKDVYALSLDPALQDKWCLSKEDIEKSEPVFKE*
Coding >Pro_DTO377G3_2|g2500.t1
ATGTCATCAATCGCAAAAACTGTCATCGCGACAGGCACCTCGTCCGGCTTGGGATTTGAAACAATCAAGCAGTTA
CTCCAGCAGACACAGCCGTACAGCTTCATTCTAGGCGTTCGTGACACAGAAAAGACACGAGTCGCGTACGATGAT
CTGAAATTCGACACTTCAAAGCACAGCGTCTCTATCTTGCCCCTGGATCTTCTGAATCTTAAGAGTGTGCAGAGC
TTTGCCAAACAAGCACTCTCTGAATTGGGCAAAAGGCCGTTGAACTATCTTTTCCTTATTGCGGGGTTCCTTGCC
AGCGCTGAAGGGCCGGGGCCTCATGGCTCACAATGGTGCGAATCATACGTGGTAAACCATCTAGCCCAGCATTAC
CTGACACACGAATTTGCTGAGACCCTGTCTGCCTCGCGATCACGTATCGTCATTGTATCTTCGGGTGCAATTCGT
AATGTGAGAGGAGGCGATCCAGCCACTCTTGACATTGACCTAAAAGCAAACTCCGGTGCAAACGCCAGAGTAGTG
TATAGTGCATCGAAATTCACTCAGCTTCTGGGTGCACACTACTGGCGTCGTAGCCTCCCAAATTGCACAGTCGTG
GCTGTCTCGCCAGGTCTCATCCCTAACACCAAGCTTGCCCAGCATTCGAGCTTAGGATTGTCCATGGATATGCCC
GATGCCAAGACCGTGCCAGAGGGTGCCCAGAATATCCTCCGCGCGGTCACGGTCGAGAATCTTCCCGCTGACCCG
GAACAGATTTTCTTGACTAGCTGGGGTGAATGGTGGCCCAAGGATGTCTATGCGTTGAGTCTTGATCCTGCGCTG
CAAGACAAGTGGTGTTTGAGCAAGGAGGATATCGAGAAGTCCGAGCCTGTGTTCAAGGAATAA
Transcript >Pro_DTO377G3_2|g2500.t1
ATGTCATCAATCGCAAAAACTGTCATCGCGACAGGCACCTCGTCCGGCTTGGGATTTGAAACAATCAAGCAGTTA
CTCCAGCAGACACAGCCGTACAGCTTCATTCTAGGCGTTCGTGACACAGAAAAGACACGAGTCGCGTACGATGAT
CTGAAATTCGACACTTCAAAGCACAGCGTCTCTATCTTGCCCCTGGATCTTCTGAATCTTAAGAGTGTGCAGAGC
TTTGCCAAACAAGCACTCTCTGAATTGGGCAAAAGGCCGTTGAACTATCTTTTCCTTATTGCGGGGTTCCTTGCC
AGCGCTGAAGGGCCGGGGCCTCATGGCTCACAATGGTGCGAATCATACGTGGTAAACCATCTAGCCCAGCATTAC
CTGACACACGAATTTGCTGAGACCCTGTCTGCCTCGCGATCACGTATCGTCATTGTATCTTCGGGTGCAATTCGT
AATGTGAGAGGAGGCGATCCAGCCACTCTTGACATTGACCTAAAAGCAAACTCCGGTGCAAACGCCAGAGTAGTG
TATAGTGCATCGAAATTCACTCAGCTTCTGGGTGCACACTACTGGCGTCGTAGCCTCCCAAATTGCACAGTCGTG
GCTGTCTCGCCAGGTCTCATCCCTAACACCAAGCTTGCCCAGCATTCGAGCTTAGGATTGTCCATGGATATGCCC
GATGCCAAGACCGTGCCAGAGGGTGCCCAGAATATCCTCCGCGCGGTCACGGTCGAGAATCTTCCCGCTGACCCG
GAACAGATTTTCTTGACTAGCTGGGGTGAATGGTGGCCCAAGGATGTCTATGCGTTGAGTCTTGATCCTGCGCTG
CAAGACAAGTGGTGTTTGAGCAAGGAGGATATCGAGAAGTCCGAGCCTGTGTTCAAGGAATAA
Gene >Pro_DTO377G3_2|g2500.t1
ATGTCATCAATCGCAAAAACTGTCATCGCGACAGGCACCTCGTCCGGCTTGGTAAGAATTATATGCCCTTGGAAT
ATTCAGGATCCTAACATCGGTCATAGGGATTTGAAACAATCAAGCAGTTACTCCAGCAGACACAGCCGTACAGCT
TCATTCTAGGCGTTCGTGACACAGAAAAGACACGAGTCGCGTACGATGATCTGAAATTCGACACTTCAAAGCACA
GCGTCTCTATCTTGCCCCTGGATCTTCTGAATCTTAAGAGTGTGCAGAGCTTTGCCAAACAAGCACTCTCTGAAT
TGGGCAAAAGGCCGTTGAACTATCTTTTCCTTATTGCGGGGTTCCTTGCCAGCGCTGAAGGGCCGGGGCCTCATG
GCTCACAATGGTGCGAATCATACGTGGTAAACCATCTAGGTATGTCAAAACGACTCATCGGCTACTAAAGGAGTC
TAGGAGGCTAGAGCTAAACATTCATCTATCGCAACCCAGCCCAGCATTACCTGACACACGAATTTGCTGAGACCC
TGTCTGCCTCGCGATCACGTATCGTCATTGTATCTTCGGGTGCAATTCGTAATGTGAGAGGAGGCGATCCAGGTG
AGTTTAGTTCCATTCTCCCAGCTGTGTCGCTGTCCGAAGCAAAGTTGTTCACAAGGCTGACTTCATATTAGCCAC
TCTTGACATTGACCTAAAAGCAAACTCCGGTGCAAACGCCAGAGTAGTGTATAGTGCATCGAAATTCACTCAGCT
TCTGGGTGCACACTACTGGCGTCGTAGCCTCCCAAATTGCACAGTCGTGGCTGTCTCGCCAGGTCTCATCCCTAA
CACCAAGCTTGCCCAGCATTCGAGCTTAGGATTGTCCATGGATATGCCCGATGCCAAGACCGTGCCAGAGGGTAA
GGATCTTTGCATTTGGATTTTTGATTTGAAGACGATATCTAACAATTAATAGGTGCCCAGAATATCCTCCGCGCG
GTCACGGTCGAGAATCTTCCCGCTGACCCGGAACAGATTTTCTTGACTAGCTGGGGTGAATGGTGGCCCAAGGAT
GTCTATGCGTTGAGTCTTGATCCTGCGCTGCAAGACAAGTGGTGTTTGAGCAAGGAGGATATCGAGAAGTCCGAG
CCTGTGTTCAAGGAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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