Protein ID | Pro_DTO377G3_2|g2500.t1 |
Gene name | |
Location | scaffold_03:197088..198231 |
Strand | - |
Gene length (bp) | 1143 |
Transcript length (bp) | 888 |
Coding sequence length (bp) | 888 |
Protein length (aa) | 296 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00106 | adh_short | short chain dehydrogenase | 1.3E-09 | 6 | 148 |
Orthofinder run ID | 2 |
Orthogroup | 3666 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g2500.t1 MSSIAKTVIATGTSSGLGFETIKQLLQQTQPYSFILGVRDTEKTRVAYDDLKFDTSKHSVSILPLDLLNLKSVQS FAKQALSELGKRPLNYLFLIAGFLASAEGPGPHGSQWCESYVVNHLAQHYLTHEFAETLSASRSRIVIVSSGAIR NVRGGDPATLDIDLKANSGANARVVYSASKFTQLLGAHYWRRSLPNCTVVAVSPGLIPNTKLAQHSSLGLSMDMP DAKTVPEGAQNILRAVTVENLPADPEQIFLTSWGEWWPKDVYALSLDPALQDKWCLSKEDIEKSEPVFKE* |
Coding | >Pro_DTO377G3_2|g2500.t1 ATGTCATCAATCGCAAAAACTGTCATCGCGACAGGCACCTCGTCCGGCTTGGGATTTGAAACAATCAAGCAGTTA CTCCAGCAGACACAGCCGTACAGCTTCATTCTAGGCGTTCGTGACACAGAAAAGACACGAGTCGCGTACGATGAT CTGAAATTCGACACTTCAAAGCACAGCGTCTCTATCTTGCCCCTGGATCTTCTGAATCTTAAGAGTGTGCAGAGC TTTGCCAAACAAGCACTCTCTGAATTGGGCAAAAGGCCGTTGAACTATCTTTTCCTTATTGCGGGGTTCCTTGCC AGCGCTGAAGGGCCGGGGCCTCATGGCTCACAATGGTGCGAATCATACGTGGTAAACCATCTAGCCCAGCATTAC CTGACACACGAATTTGCTGAGACCCTGTCTGCCTCGCGATCACGTATCGTCATTGTATCTTCGGGTGCAATTCGT AATGTGAGAGGAGGCGATCCAGCCACTCTTGACATTGACCTAAAAGCAAACTCCGGTGCAAACGCCAGAGTAGTG TATAGTGCATCGAAATTCACTCAGCTTCTGGGTGCACACTACTGGCGTCGTAGCCTCCCAAATTGCACAGTCGTG GCTGTCTCGCCAGGTCTCATCCCTAACACCAAGCTTGCCCAGCATTCGAGCTTAGGATTGTCCATGGATATGCCC GATGCCAAGACCGTGCCAGAGGGTGCCCAGAATATCCTCCGCGCGGTCACGGTCGAGAATCTTCCCGCTGACCCG GAACAGATTTTCTTGACTAGCTGGGGTGAATGGTGGCCCAAGGATGTCTATGCGTTGAGTCTTGATCCTGCGCTG CAAGACAAGTGGTGTTTGAGCAAGGAGGATATCGAGAAGTCCGAGCCTGTGTTCAAGGAATAA |
Transcript | >Pro_DTO377G3_2|g2500.t1 ATGTCATCAATCGCAAAAACTGTCATCGCGACAGGCACCTCGTCCGGCTTGGGATTTGAAACAATCAAGCAGTTA CTCCAGCAGACACAGCCGTACAGCTTCATTCTAGGCGTTCGTGACACAGAAAAGACACGAGTCGCGTACGATGAT CTGAAATTCGACACTTCAAAGCACAGCGTCTCTATCTTGCCCCTGGATCTTCTGAATCTTAAGAGTGTGCAGAGC TTTGCCAAACAAGCACTCTCTGAATTGGGCAAAAGGCCGTTGAACTATCTTTTCCTTATTGCGGGGTTCCTTGCC AGCGCTGAAGGGCCGGGGCCTCATGGCTCACAATGGTGCGAATCATACGTGGTAAACCATCTAGCCCAGCATTAC CTGACACACGAATTTGCTGAGACCCTGTCTGCCTCGCGATCACGTATCGTCATTGTATCTTCGGGTGCAATTCGT AATGTGAGAGGAGGCGATCCAGCCACTCTTGACATTGACCTAAAAGCAAACTCCGGTGCAAACGCCAGAGTAGTG TATAGTGCATCGAAATTCACTCAGCTTCTGGGTGCACACTACTGGCGTCGTAGCCTCCCAAATTGCACAGTCGTG GCTGTCTCGCCAGGTCTCATCCCTAACACCAAGCTTGCCCAGCATTCGAGCTTAGGATTGTCCATGGATATGCCC GATGCCAAGACCGTGCCAGAGGGTGCCCAGAATATCCTCCGCGCGGTCACGGTCGAGAATCTTCCCGCTGACCCG GAACAGATTTTCTTGACTAGCTGGGGTGAATGGTGGCCCAAGGATGTCTATGCGTTGAGTCTTGATCCTGCGCTG CAAGACAAGTGGTGTTTGAGCAAGGAGGATATCGAGAAGTCCGAGCCTGTGTTCAAGGAATAA |
Gene | >Pro_DTO377G3_2|g2500.t1 ATGTCATCAATCGCAAAAACTGTCATCGCGACAGGCACCTCGTCCGGCTTGGTAAGAATTATATGCCCTTGGAAT ATTCAGGATCCTAACATCGGTCATAGGGATTTGAAACAATCAAGCAGTTACTCCAGCAGACACAGCCGTACAGCT TCATTCTAGGCGTTCGTGACACAGAAAAGACACGAGTCGCGTACGATGATCTGAAATTCGACACTTCAAAGCACA GCGTCTCTATCTTGCCCCTGGATCTTCTGAATCTTAAGAGTGTGCAGAGCTTTGCCAAACAAGCACTCTCTGAAT TGGGCAAAAGGCCGTTGAACTATCTTTTCCTTATTGCGGGGTTCCTTGCCAGCGCTGAAGGGCCGGGGCCTCATG GCTCACAATGGTGCGAATCATACGTGGTAAACCATCTAGGTATGTCAAAACGACTCATCGGCTACTAAAGGAGTC TAGGAGGCTAGAGCTAAACATTCATCTATCGCAACCCAGCCCAGCATTACCTGACACACGAATTTGCTGAGACCC TGTCTGCCTCGCGATCACGTATCGTCATTGTATCTTCGGGTGCAATTCGTAATGTGAGAGGAGGCGATCCAGGTG AGTTTAGTTCCATTCTCCCAGCTGTGTCGCTGTCCGAAGCAAAGTTGTTCACAAGGCTGACTTCATATTAGCCAC TCTTGACATTGACCTAAAAGCAAACTCCGGTGCAAACGCCAGAGTAGTGTATAGTGCATCGAAATTCACTCAGCT TCTGGGTGCACACTACTGGCGTCGTAGCCTCCCAAATTGCACAGTCGTGGCTGTCTCGCCAGGTCTCATCCCTAA CACCAAGCTTGCCCAGCATTCGAGCTTAGGATTGTCCATGGATATGCCCGATGCCAAGACCGTGCCAGAGGGTAA GGATCTTTGCATTTGGATTTTTGATTTGAAGACGATATCTAACAATTAATAGGTGCCCAGAATATCCTCCGCGCG GTCACGGTCGAGAATCTTCCCGCTGACCCGGAACAGATTTTCTTGACTAGCTGGGGTGAATGGTGGCCCAAGGAT GTCTATGCGTTGAGTCTTGATCCTGCGCTGCAAGACAAGTGGTGTTTGAGCAAGGAGGATATCGAGAAGTCCGAG CCTGTGTTCAAGGAATAA |