Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g2496.t1
Gene name
Location	scaffold_03:184912..185909
Strand	+
Gene length (bp)	997
Transcript length (bp)	933
Coding sequence length (bp)	933
Protein length (aa)	311

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05368	NmrA	NmrA-like family	1.7E-15	5	240
PF13460	NAD_binding_10	NAD(P)H-binding	1.6E-13	10	154

GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g2496.t1 MGTKIGVFPASGGLGSSIVNHLAKLVPKSDLVLVGRHPEKLHDLEQAGATIRRADYDAPSTLDTAFEGVDVLMLV SYASFEIDHRTKAHILAINAAVKSGVKYIFYSSLGFGGDLTDQSVAHVMGAHIQTEKYLSSLQEKVSHTIIREGL YTESFPIYTAFFDPKHPTDEVTIPHSGTGPGVAWVKRDELGEATAKLIASYVKNPTSFGYLNKALLLSGPREISL AETVEIIGRAIGKSLKIREISVDEFVNLPQIGDHLTYRGVNLSREWATAWEAIRRGETAVVTPTLREILGREPES FETTLKALIG*
Coding	>Pro_DTO377G3_2\|g2496.t1 ATGGGTACCAAAATCGGCGTCTTTCCCGCTTCCGGGGGCCTTGGATCAAGCATTGTGAACCACCTGGCAAAACTA GTCCCAAAATCCGATCTCGTTCTGGTTGGCCGACACCCCGAGAAACTGCACGACCTCGAGCAAGCTGGTGCTACG ATACGGAGGGCCGACTATGATGCGCCATCAACATTAGACACAGCCTTCGAAGGCGTCGATGTCTTGATGCTGGTT TCATATGCATCATTCGAGATAGATCACAGGACCAAGGCACACATTCTTGCTATAAATGCAGCCGTCAAAAGTGGC GTCAAGTACATTTTTTACTCCTCCCTTGGATTCGGCGGTGATCTAACCGACCAGAGTGTCGCTCATGTGATGGGC GCCCATATCCAGACAGAGAAATACCTCTCTTCTCTGCAAGAGAAAGTGTCCCACACCATAATCCGCGAGGGTCTC TACACTGAATCCTTCCCGATATATACCGCATTCTTCGATCCGAAGCATCCAACGGACGAGGTTACGATCCCTCAC TCGGGTACAGGCCCAGGTGTGGCGTGGGTCAAGCGCGATGAGCTGGGCGAGGCAACCGCCAAGTTGATTGCCTCG TATGTCAAGAACCCGACCAGCTTTGGGTATTTGAACAAGGCTCTTCTGCTCTCTGGGCCTCGGGAGATCTCTCTT GCGGAGACGGTTGAGATTATCGGTCGGGCGATTGGGAAATCGCTCAAGATCCGTGAGATCTCTGTCGATGAGTTC GTGAATCTTCCTCAGATTGGTGACCATCTTACCTACAGGGGGGTCAATCTGTCGAGGGAGTGGGCTACGGCTTGG GAGGCTATCCGACGGGGTGAGACTGCGGTTGTGACCCCGACTCTACGTGAGATCTTAGGGCGTGAACCGGAGAGC TTCGAAACTACTCTCAAGGCGTTGATTGGATGA
Transcript	>Pro_DTO377G3_2\|g2496.t1 ATGGGTACCAAAATCGGCGTCTTTCCCGCTTCCGGGGGCCTTGGATCAAGCATTGTGAACCACCTGGCAAAACTA GTCCCAAAATCCGATCTCGTTCTGGTTGGCCGACACCCCGAGAAACTGCACGACCTCGAGCAAGCTGGTGCTACG ATACGGAGGGCCGACTATGATGCGCCATCAACATTAGACACAGCCTTCGAAGGCGTCGATGTCTTGATGCTGGTT TCATATGCATCATTCGAGATAGATCACAGGACCAAGGCACACATTCTTGCTATAAATGCAGCCGTCAAAAGTGGC GTCAAGTACATTTTTTACTCCTCCCTTGGATTCGGCGGTGATCTAACCGACCAGAGTGTCGCTCATGTGATGGGC GCCCATATCCAGACAGAGAAATACCTCTCTTCTCTGCAAGAGAAAGTGTCCCACACCATAATCCGCGAGGGTCTC TACACTGAATCCTTCCCGATATATACCGCATTCTTCGATCCGAAGCATCCAACGGACGAGGTTACGATCCCTCAC TCGGGTACAGGCCCAGGTGTGGCGTGGGTCAAGCGCGATGAGCTGGGCGAGGCAACCGCCAAGTTGATTGCCTCG TATGTCAAGAACCCGACCAGCTTTGGGTATTTGAACAAGGCTCTTCTGCTCTCTGGGCCTCGGGAGATCTCTCTT GCGGAGACGGTTGAGATTATCGGTCGGGCGATTGGGAAATCGCTCAAGATCCGTGAGATCTCTGTCGATGAGTTC GTGAATCTTCCTCAGATTGGTGACCATCTTACCTACAGGGGGGTCAATCTGTCGAGGGAGTGGGCTACGGCTTGG GAGGCTATCCGACGGGGTGAGACTGCGGTTGTGACCCCGACTCTACGTGAGATCTTAGGGCGTGAACCGGAGAGC TTCGAAACTACTCTCAAGGCGTTGATTGGATGA
Gene	>Pro_DTO377G3_2\|g2496.t1 ATGGGTACCAAAATCGGCGTCTTTCCCGCTTCCGGGGGCCTTGGATCAAGCATTGTGAACCACCTGGCAAAACTA GTCCCAAAATCCGATCTCGTTCTGGTTGGCCGACACCCCGAGAAACTGCACGACCTCGAGCAAGCTGGTGCTACG ATACGGAGGGCCGACTATGATGCGCCATCAACATTAGACACAGCCTTCGAAGGCGTCGATGTCTTGATGCTGGTT TCATATGCATCATTCGAGATAGATCACAGGACCAAGGTAAGAAAATCAAGTGTGATAGCTCACCTAAGTACGGAG GAGTTGGGCTGATAATGATAACCAGGCACACATTCTTGCTATAAATGCAGCCGTCAAAAGTGGCGTCAAGTACAT TTTTTACTCCTCCCTTGGATTCGGCGGTGATCTAACCGACCAGAGTGTCGCTCATGTGATGGGCGCCCATATCCA GACAGAGAAATACCTCTCTTCTCTGCAAGAGAAAGTGTCCCACACCATAATCCGCGAGGGTCTCTACACTGAATC CTTCCCGATATATACCGCATTCTTCGATCCGAAGCATCCAACGGACGAGGTTACGATCCCTCACTCGGGTACAGG CCCAGGTGTGGCGTGGGTCAAGCGCGATGAGCTGGGCGAGGCAACCGCCAAGTTGATTGCCTCGTATGTCAAGAA CCCGACCAGCTTTGGGTATTTGAACAAGGCTCTTCTGCTCTCTGGGCCTCGGGAGATCTCTCTTGCGGAGACGGT TGAGATTATCGGTCGGGCGATTGGGAAATCGCTCAAGATCCGTGAGATCTCTGTCGATGAGTTCGTGAATCTTCC TCAGATTGGTGACCATCTTACCTACAGGGGGGTCAATCTGTCGAGGGAGTGGGCTACGGCTTGGGAGGCTATCCG ACGGGGTGAGACTGCGGTTGTGACCCCGACTCTACGTGAGATCTTAGGGCGTGAACCGGAGAGCTTCGAAACTAC TCTCAAGGCGTTGATTGGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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