Protein ID | Pro_DTO377G3_2|g2478.t1 |
Gene name | tspC |
Location | scaffold_03:136629..141187 |
Strand | + |
Gene length (bp) | 4558 |
Transcript length (bp) | 1986 |
Coding sequence length (bp) | 1986 |
Protein length (aa) | 662 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00982 | Glyco_transf_20 | Glycosyltransferase family 20 | 9.0E-160 | 10 | 471 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003824 | catalytic activity | Yes |
GO:0005992 | trehalose biosynthetic process | Yes |
GO:0009058 | biosynthetic process | No |
GO:0046351 | disaccharide biosynthetic process | No |
GO:0008150 | biological_process | No |
GO:0071704 | organic substance metabolic process | No |
GO:0016051 | carbohydrate biosynthetic process | No |
GO:0009311 | oligosaccharide metabolic process | No |
GO:0008152 | metabolic process | No |
GO:0044262 | cellular carbohydrate metabolic process | No |
GO:0034637 | cellular carbohydrate biosynthetic process | No |
GO:0005991 | trehalose metabolic process | No |
GO:0044238 | primary metabolic process | No |
GO:0003674 | molecular_function | No |
GO:0005975 | carbohydrate metabolic process | No |
GO:0044249 | cellular biosynthetic process | No |
GO:0005984 | disaccharide metabolic process | No |
GO:0044237 | cellular metabolic process | No |
GO:0009312 | oligosaccharide biosynthetic process | No |
GO:0009987 | cellular process | No |
GO:1901576 | organic substance biosynthetic process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 28 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g2478.t1 MGSITDEKRKLIIVSNRLPLSVKRVNGAFQSSISSGGLVTSLSGLTKSTKFQWFGWPGIEVKDPKDQEDVKKSLG EHNAVPIFLDSTLAHEHYNGFSNRILWPILHYQSGVVFDETPWQAYRRVNELFADAIAETADTGTLIWVHDYHLM LLPELLRDRLKRQGKTCAIGFSLHTPFPAGDFWRNLPVRKHLIEGMLSSDLIGFHTDEYKQNFIDTCASLLNART EIPNQIQYKNRLVCVNKFIVGIDPEKFTDTLKKPEVQERIRNLKERYKGVKVIVGVDRLDHIKGLTQKLKGFDAF LDDHPELQNKVVLIQVAVPSREEVKEYQELETELSTIAGKINGKHATPEGTPLLYMHRSVPFDELTALYSVADVC LLTSTRDGMNLVAFEYVACQQERHGVLVLSEFAGAATFMTKGSIPFHPANKTEMSEAIFNALNLDPAERRSKYEY LRDFINTNTSAKWGETFIEKLALRFSPRLLLSLCFLTINCVSITLFLCLQVTCFDPTPSMSLANGILSSPSPLSL PFPHWTFIYIRAFPYQESVLCGETKRAPKKNKCIPPYPQNPSQVLRTRSSYVRCMNFILAIPLALQYQELSCCYL AAMVCHSVNFLPMLLLPISDLLNANDDKSGILTIFDDQTTLVWDTFEHFAFIVLISLIRSL* |
Coding | >Pro_DTO377G3_2|g2478.t1 ATGGGTTCAATCACCGACGAAAAGCGAAAACTCATCATCGTCTCAAATCGTCTTCCATTGTCTGTGAAACGTGTT AATGGTGCCTTTCAATCTTCTATTTCGAGTGGTGGCCTCGTCACTTCTCTATCTGGGTTGACCAAGTCCACCAAG TTCCAATGGTTTGGCTGGCCAGGAATCGAAGTTAAAGACCCAAAGGATCAAGAAGATGTGAAAAAGAGTTTGGGA GAACATAATGCCGTTCCCATATTCCTCGATAGTACCCTGGCCCATGAGCACTATAACGGGTTCTCGAATCGTATC CTCTGGCCAATTCTCCATTATCAATCAGGTGTAGTTTTCGACGAAACTCCGTGGCAAGCATATAGGCGGGTAAAC GAGTTATTCGCAGATGCGATTGCTGAGACAGCGGATACTGGGACATTGATCTGGGTCCATGATTATCATCTCATG CTTCTGCCCGAGCTTCTCCGTGATCGACTCAAACGGCAAGGTAAAACCTGTGCCATTGGCTTCTCACTCCACACG CCCTTTCCAGCAGGAGACTTTTGGAGGAATCTCCCTGTTCGAAAGCATCTCATCGAAGGCATGCTGTCCAGTGAC CTGATTGGATTCCACACGGACGAATATAAACAAAATTTCATCGACACCTGTGCTAGTCTCCTCAACGCTCGCACC GAAATTCCCAACCAAATTCAGTACAAAAATCGGCTAGTCTGTGTAAACAAGTTCATTGTCGGCATCGATCCCGAA AAGTTCACCGACACCCTGAAAAAGCCCGAGGTTCAAGAGCGCATTCGAAACTTGAAAGAACGCTATAAAGGCGTC AAGGTAATTGTTGGCGTCGACCGACTGGACCACATTAAAGGCCTCACGCAAAAATTGAAAGGATTCGACGCTTTT CTCGATGATCATCCAGAACTGCAAAACAAGGTCGTTCTTATCCAAGTTGCCGTTCCAAGCCGCGAGGAAGTGAAA GAATATCAGGAGCTCGAAACCGAACTGTCTACTATCGCCGGGAAGATCAACGGGAAACATGCCACACCCGAGGGC ACTCCGCTGCTGTATATGCATCGCTCCGTTCCATTCGACGAATTGACCGCGTTGTACTCAGTAGCCGATGTTTGC CTTCTCACCTCTACCCGCGACGGAATGAATCTCGTGGCCTTCGAGTATGTGGCATGCCAGCAAGAGCGTCACGGT GTCCTCGTTCTCTCCGAATTTGCTGGCGCGGCTACCTTCATGACAAAGGGTAGTATCCCGTTCCATCCTGCAAAC AAGACGGAAATGTCCGAGGCGATCTTCAATGCGTTGAATCTGGACCCGGCCGAACGAAGGAGCAAGTACGAGTAT CTTCGAGACTTTATCAATACCAACACAAGTGCGAAATGGGGCGAGACTTTCATCGAAAAATTAGCCCTCCGTTTT TCTCCAAGGTTGCTTTTGTCTTTGTGTTTCTTGACTATTAATTGTGTTTCCATCACCTTGTTCTTGTGCCTACAA GTTACCTGCTTTGACCCAACTCCATCTATGTCACTTGCTAATGGAATTCTCAGCTCTCCCAGCCCTTTGTCCCTT CCATTCCCACACTGGACGTTCATTTATATCCGAGCCTTCCCTTATCAAGAATCCGTCCTTTGTGGTGAAACAAAG AGAGCCCCGAAGAAAAATAAATGCATACCTCCATATCCTCAAAACCCTTCCCAAGTTCTTCGTACTCGAAGTTCC TATGTCCGGTGTATGAATTTCATCCTGGCAATCCCATTGGCCCTTCAATACCAAGAATTGAGTTGTTGTTACCTT GCTGCTATGGTTTGCCATTCTGTCAACTTCCTTCCTATGCTTCTATTACCCATCAGTGATTTGCTTAATGCCAAT GATGATAAAAGTGGCATACTGACCATCTTTGATGACCAAACTACACTTGTTTGGGACACCTTTGAGCACTTTGCC TTCATTGTACTTATCAGTCTAATCCGTTCGTTGTAA |
Transcript | >Pro_DTO377G3_2|g2478.t1 ATGGGTTCAATCACCGACGAAAAGCGAAAACTCATCATCGTCTCAAATCGTCTTCCATTGTCTGTGAAACGTGTT AATGGTGCCTTTCAATCTTCTATTTCGAGTGGTGGCCTCGTCACTTCTCTATCTGGGTTGACCAAGTCCACCAAG TTCCAATGGTTTGGCTGGCCAGGAATCGAAGTTAAAGACCCAAAGGATCAAGAAGATGTGAAAAAGAGTTTGGGA GAACATAATGCCGTTCCCATATTCCTCGATAGTACCCTGGCCCATGAGCACTATAACGGGTTCTCGAATCGTATC CTCTGGCCAATTCTCCATTATCAATCAGGTGTAGTTTTCGACGAAACTCCGTGGCAAGCATATAGGCGGGTAAAC GAGTTATTCGCAGATGCGATTGCTGAGACAGCGGATACTGGGACATTGATCTGGGTCCATGATTATCATCTCATG CTTCTGCCCGAGCTTCTCCGTGATCGACTCAAACGGCAAGGTAAAACCTGTGCCATTGGCTTCTCACTCCACACG CCCTTTCCAGCAGGAGACTTTTGGAGGAATCTCCCTGTTCGAAAGCATCTCATCGAAGGCATGCTGTCCAGTGAC CTGATTGGATTCCACACGGACGAATATAAACAAAATTTCATCGACACCTGTGCTAGTCTCCTCAACGCTCGCACC GAAATTCCCAACCAAATTCAGTACAAAAATCGGCTAGTCTGTGTAAACAAGTTCATTGTCGGCATCGATCCCGAA AAGTTCACCGACACCCTGAAAAAGCCCGAGGTTCAAGAGCGCATTCGAAACTTGAAAGAACGCTATAAAGGCGTC AAGGTAATTGTTGGCGTCGACCGACTGGACCACATTAAAGGCCTCACGCAAAAATTGAAAGGATTCGACGCTTTT CTCGATGATCATCCAGAACTGCAAAACAAGGTCGTTCTTATCCAAGTTGCCGTTCCAAGCCGCGAGGAAGTGAAA GAATATCAGGAGCTCGAAACCGAACTGTCTACTATCGCCGGGAAGATCAACGGGAAACATGCCACACCCGAGGGC ACTCCGCTGCTGTATATGCATCGCTCCGTTCCATTCGACGAATTGACCGCGTTGTACTCAGTAGCCGATGTTTGC CTTCTCACCTCTACCCGCGACGGAATGAATCTCGTGGCCTTCGAGTATGTGGCATGCCAGCAAGAGCGTCACGGT GTCCTCGTTCTCTCCGAATTTGCTGGCGCGGCTACCTTCATGACAAAGGGTAGTATCCCGTTCCATCCTGCAAAC AAGACGGAAATGTCCGAGGCGATCTTCAATGCGTTGAATCTGGACCCGGCCGAACGAAGGAGCAAGTACGAGTAT CTTCGAGACTTTATCAATACCAACACAAGTGCGAAATGGGGCGAGACTTTCATCGAAAAATTAGCCCTCCGTTTT TCTCCAAGGTTGCTTTTGTCTTTGTGTTTCTTGACTATTAATTGTGTTTCCATCACCTTGTTCTTGTGCCTACAA GTTACCTGCTTTGACCCAACTCCATCTATGTCACTTGCTAATGGAATTCTCAGCTCTCCCAGCCCTTTGTCCCTT CCATTCCCACACTGGACGTTCATTTATATCCGAGCCTTCCCTTATCAAGAATCCGTCCTTTGTGGTGAAACAAAG AGAGCCCCGAAGAAAAATAAATGCATACCTCCATATCCTCAAAACCCTTCCCAAGTTCTTCGTACTCGAAGTTCC TATGTCCGGTGTATGAATTTCATCCTGGCAATCCCATTGGCCCTTCAATACCAAGAATTGAGTTGTTGTTACCTT GCTGCTATGGTTTGCCATTCTGTCAACTTCCTTCCTATGCTTCTATTACCCATCAGTGATTTGCTTAATGCCAAT GATGATAAAAGTGGCATACTGACCATCTTTGATGACCAAACTACACTTGTTTGGGACACCTTTGAGCACTTTGCC TTCATTGTACTTATCAGTCTAATCCGTTCGTTGTAA |
Gene | >Pro_DTO377G3_2|g2478.t1 ATGGGTTCAATCACCGACGAAAAGCGAAAACTCATCATCGTCTCAAATCGTCTTCCATTGTCTGTGAAACGTGTT AATGGTGCCTTTCAATCTTCTATTTCGAGTGGTGGCCTCGTCACTTCTCTATCTGGGTTGACCAAGTCCACCAAG TTCCAATGGTTTGGCTGGCCAGGAATCGAAGTTAAAGACCCAAAGGATCAAGAAGATGTGAAAAAGAGTTTGGGA GAACATAATGCCGTTCCCATATTCCTCGATAGTACCCTGGCCCATGAGCACTATAACGGGTTCTCGAGTAAGCTC CGTGCCCTAACACCGCGATCCACGCTGACCGCCAGATCGTATCCTCTGGCCAATTCTCCATTATCAATCAGGTGT AGTTTTCGACGAAACTCCGTGGCAAGCATATAGGCGGGTAAACGAGTTATTCGCAGATGCGATTGCTGAGACAGC GGATACTGGGACATTGATCTGGGTCCATGATTATCATCTCATGCTTCTGCCCGAGCTTCTCCGTGATCGACTCAA ACGGCAAGGTAAAACCTGTGCCATTGGCTTCTCACTCCACACGCCCTTTCCAGCAGGAGACTTTTGGAGGAATCT CCCTGTTCGAAAGCATCTCATCGAAGGCATGCTGTCCAGTGACCTGATTGGATTCCACACGGACGAATATAAACA AAATTTCATCGACACCTGTGCTAGTCTCCTGTGAGCAATAGCCCTAATTCCCTTACTCCACAAGCTTATGAAGTA TCAACTAACACCACCACAGCAACGCTCGCACCGAAATTCCCAACCAAATTCAGTACAAAAATCGGCTAGTCTGTG TAAACAAGTTCATTGTCGGCATCGATCCCGAAAAGTTCACCGACACCCTGAAAAAGCCCGAGGTTCAAGAGCGCA TTCGAAACTTGAAAGAACGCTATAAAGGCGTCAAGGTAATTGTTGGCGTCGACCGACTGGACCACATTAAAGGCC TCACGCAAAAATTGAAAGGATTCGACGCTTTTCTCGATGATCATCCAGAACTGCAAAACAAGGTCGTTCTTATCC AAGTTGCCGTTCCAAGCCGCGAGGAAGTGAAAGAATATCAGGAGCTCGAAACCGAACTGTCTACTATCGCCGGGA AGATCAACGGGAAACATGGTAAGACCTTGCCACAAATGTTGGGATTGTACTAACTAGCCAGCCACACCCGAGGGC ACTCCGCTGCTGTATATGCATCGCTCCGTTCCATTCGACGAATTGACCGCGTTGTACTCAGTAGCCGATGTTTGC CTTCTCACCTCTACCCGCGACGGAATGAATCTCGTGGCCTTCGAGTATGTGGCATGCCAGCAAGAGCGTCACGGT GTCCTCGTTCTCTCCGAATTTGCTGGCGCGGCTACCTTCATGACAAAGGGTAGTATCCCGTTCCATCCTGCAAAC AAGACGGAAATGTCCGAGGCGATCTTCAATGCGTTGAATCTGGACCCGGCCGAACGAAGGAGCAAGTACGAGTAT CTTCGAGACTTTATCAATACCAACACAAGGTTCGAAGGACTTTCCTGCTTTCCTATTGTCAGTTGCTAACTTTGG GCAGTGCGAAATGGGGCGAGACTTTCATCGAAAAATTAGCCCTCCGTTGTAAACGACCCGGGGATCCATGTTGAT TGTCGAGGACTGCTGGACATATGTATAGTGTTTTCAACCCCTTGTCGAAAGCAATTCGCTTGCCGTTACCATAGG GAATGAATTGTCGTCTTGTCTTGCCCACGGTTCCTGAGATATTGGCCTATTGGCTTGAGTCCGTATTCCTTCGCT TAGTTGTCGATGGCTATTTTGCTCGTCGGTAGTCGTTTTGCCTAGTTGTCCGTTTCCTTTTGGACTCCTCATGTT GTCGTGGGCAATGCTTCCTTCTTTTGCTGAGATTTGGATTACTTGGAGTCAATCGCCGCAATGATGAGGCGGTAG CGCAAAGCGGTAATGCCAAAGCAGTTGGAATAGATCTAGGTACCTGGCCCGGAAACCCCGATGCTCGAGCAAATT GTAGCTAGCTTTATCTCGCGCACTGCATCGATTCACAATGTGAAAGTTTGTACAAATATAGACTACTATCCTAGC TACAAGTTCACCAAGTTTGGTGCCAATATCTATGTTAATGCGAGTAGGGTTAAACCTGTCACCTCACAGCATCTA TCACATCCGAGCAATGTGTACATATACCATAGACTCACTAAATCCAACCAATCAGCGTCCGATCGGAGGCAGAAC CTCCTGCCCACCGCCAATCAGCATTGAGTACGAGTATAAATTGTTCAACTCAATTTTTCTGTCTTGTTTCTTTCT TTCCTCCTACACCACTCTCTGTCTCTCTTATTGCATCCAAATTCAGAGACTCCATCCTTGTACTCTTTCTCATTG CATCATGACTTGGACTTGACCTTCTGACCCCAATGCACGTAATCTCTTGTTTACACTACACCATTGCAGGGTGTA CCTTGGTGAGTCTCAAGATCTCTTGCTTCGTGTGTCAATGACCTCGCTGCCTAGGTGACTTGTTTACCTCGCTTC GTCGTCGACGTCCTTGCTTACTCGTTCGCAAGTTTCTCCAAGGTTGCTTTTGTCTTTGTGTTTCTTGACTATTAA TTGTGTTTCCATCACCTTGTTCTTGGTACGTTTTCTCCTGCTACCCCCTACATCCTCTCCATCACAGCATTCTAT TGTTGCGCCGATTGATACGTGTTTCCATGGCTTCATGTCCACTCTCTCTCGGTTCAATGATGATGATGATGACGA TGAAATAAGATGACACAGTTATCATTGCCTTTTCCCTCAGATGCTATGTGACTTATATTTTACTCATATCTCATT TGACTAGTGCCTACAAGTTACCTGCTTTGACCCAACTCCATCTATGTGTATGCACCCCCTCCCAACTCACATTAT CCTTCTTGCCTCTTGCCTTAGTCATGGGTTTCATATTCTTTCGGTGGCGCAATGATGATATTCAAAACTTTTTCT GTGCGCTGATGTCTGATGAACTCACTGCTATATCTGAGGCACCGTTTGAAACCCATTGCCTGATTCACAAAATCA TGATTTTTCATCTGCTAATGAGATTGTTTCTTCTAGTCTCCTGCCCTTGGTGACCGTCAATATAACAGTGATGAC GGCCAATAGCTGTTCTCGTGCCTTGGATCAGCTTCTGACCTACCAGTTTGGACTTTTTTGCTTTCTTAGCAGAGC CCCCGTTGTCATTTCCATACTCGATATACCTGCTCGTTTCTGAAACAGCATTTTCCGATGGGATTGTAAGTCTAT TTCTTCACCCTATTTCTCAAATTGGCGATGATGAAAAGGGTTATACCTACACCTCGGCTTATGTGTAGTATCTGT TCTTATCAGCCAAAAAAAAAAATACCGAGGAATGAAGAAAGAAAATACCTATCTGAGCCTACATTTGATGAAAAA ATTCCTACTTGGACGTCTATTCAATTACTGGATGAATTTTGTTAACATTGTTGCTTCCTTTACAGGTCCGCTATT GTGATCTCGATACTTGATATACCTACTCGTTTCTGAAACGGCACCTGCCGATGGAATTGTGAGTCCATTTCTACA CTCTCCAGCTCTCAATTCGGCGATGATGAAAAGGGTTGTACATACACCTCGGCTTATGTGTAGTATCTGTTCTTT TCAGCCAAAAAAAAGGGGAAAAAGTCGAAGACTGAAGAAAAAACCCCGATTTCTGAGCCTACACTTATTTGATAG AAGCCTTCCTAATTGAACGTTTCAATTACCGAATGAATTTTGCTAATATTGTGGCTGCCTTTACAGATCCGCTAT TGCTATCTCGCCACTCGATATACCTACTCATTTCTAAAATAGCACTTGCTAATGGAATTGTAAGTCCATTTCTAT GTTCCATTGTTTTCATTTGGCGATGATGAAAAGGGTTTACACCTACACCTCGGCTTATGTGTAGTATCTGTTCTT GTCAGCCAAAAAGAAAAAAGAAAAAGCCGAGGACTGAAGAAAAGAAAACCCTCATATCTGAGCCTACATTTGATT GCAACTTTCCTATTTGAACCCCATTTCATATTACTGAATTACATTTGCTAAGATCATTCCATCTTTCTAGCTCAG CTCTCCCAGCCCTTTGTCCCTTCCATTCCCACACTGGACGTTCATTTATATCCGAGCCTTCCCTTATCAAGAATC CGTCCTTTGTGGTGAAACAAAGAGAGCCCCGAAGAAAAATAAATGCATACCTCCATATCCTCAAAACCCTTCCCA AGTTCTTCGTACTCGAAGTTCCTATGTCCGGTGTATGAATTTCATCCTGGCAATCCCATTGGCCCTTCAATACCA AGAATTGAGTTGTTGTTACCTTGCTGCTATGGTTTGCCATTCTGTCAACTTCCTTCCTATGCTTCTATTACCCAT CAGTGATTTGCTTAATGCCAATGATGATAAAAGTGGCATACTGACCATCTTTGATGACCAAACTACACTTGTTTG GGACACCTTTGAGCACTTTGCCTTCATTGTACTTATCAGTCTAATCCGTTCGTTGTAA |