Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2470.t1
Gene name
Locationscaffold_03:117741..118903
Strand-
Gene length (bp)1162
Transcript length (bp)972
Coding sequence length (bp)972
Protein length (aa) 324

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00071 Ras Ras family 6.7E-38 8 147
PF08477 Roc Ras of Complex, Roc, domain of DAPkinase 1.8E-31 8 130
PF00025 Arf ADP-ribosylation factor family 1.7E-11 4 133
PF01926 MMR_HSR1 50S ribosome-binding GTPase 1.4E-04 8 109

GO

GO Term Description Terminal node
GO:0005525 GTP binding Yes
GO:0003924 GTPase activity Yes
GO:0036094 small molecule binding No
GO:0003824 catalytic activity No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0043167 ion binding No
GO:0017076 purine nucleotide binding No
GO:0097367 carbohydrate derivative binding No
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides No
GO:0016462 pyrophosphatase activity No
GO:0000166 nucleotide binding No
GO:0005488 binding No
GO:0017111 nucleoside-triphosphatase activity No
GO:0003674 molecular_function No
GO:0032561 guanyl ribonucleotide binding No
GO:0019001 guanyl nucleotide binding No
GO:0097159 organic cyclic compound binding No
GO:0032553 ribonucleotide binding No
GO:0032555 purine ribonucleotide binding No
GO:0016787 hydrolase activity No
GO:1901363 heterocyclic compound binding No
GO:0043168 anion binding No
GO:0016817 hydrolase activity, acting on acid anhydrides No
GO:1901265 nucleoside phosphate binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2470.t1
MSSSLEAKIVVLGAQGVGKTALVDRYCKNTFNPAAASTIGASFVTKRVLDSTSDTIVRLQIWDTAGQERFRSMSR
LYYRGAQAVLLCYDITDQNSFQEMAGWLRELRKNITPNDDGTDSLIIHVVGTKSDLVADDPSSRRVPFERTIAYV
AEQLYPSQASTPPPTATAGMGGLGFGTSVFGGSGCSTSNASAGPAAHSSTALQSPDSKRSSAFWGQEIGWDCCHE
ISARDGEGIDEVFRVITRKLVEQRNRRDTELALSIAGTPLANGVVGPFNPGVVEGTGSFRLGHGDKRRSWMGLAP
GVNVEGAGEERVMHASRNKGRCC*
Coding >Pro_DTO377G3_2|g2470.t1
ATGAGTTCAAGCCTCGAAGCTAAGATCGTTGTGCTCGGCGCACAGGGAGTTGGAAAGACTGCCCTCGTGGACAGG
TACTGTAAAAACACATTCAACCCCGCCGCGGCTTCAACCATCGGCGCGTCGTTCGTGACGAAGCGCGTCCTCGAT
TCCACCTCCGACACAATAGTCAGATTACAGATATGGGACACAGCTGGACAGGAGAGGTTTCGCAGCATGTCGAGA
CTTTATTATAGAGGAGCTCAAGCAGTGCTCCTGTGCTATGATATCACCGACCAAAACAGCTTCCAAGAAATGGCC
GGCTGGCTGCGCGAACTCCGCAAGAACATCACACCCAACGACGATGGCACAGACTCCCTCATAATACATGTCGTA
GGTACAAAGTCTGACCTTGTCGCGGACGACCCCTCCTCCCGCCGCGTTCCCTTCGAACGCACAATCGCCTACGTC
GCTGAACAACTCTACCCATCCCAAGCCTCCACCCCGCCACCAACCGCAACAGCAGGCATGGGCGGGCTAGGCTTT
GGAACATCTGTTTTTGGAGGCAGTGGCTGCAGTACATCGAACGCTAGTGCCGGCCCTGCAGCACACTCGTCCACT
GCCCTGCAGAGTCCGGACTCGAAACGCAGTTCAGCATTCTGGGGACAGGAGATTGGGTGGGATTGCTGTCATGAG
ATCAGTGCACGGGATGGCGAGGGAATTGATGAGGTTTTCCGCGTTATCACGCGTAAGCTGGTTGAGCAGCGCAAC
CGGCGGGATACTGAGCTGGCTTTGTCGATTGCTGGTACGCCCTTGGCGAATGGGGTCGTTGGGCCCTTTAATCCT
GGGGTTGTGGAGGGCACGGGCAGTTTCCGCCTTGGTCATGGTGATAAGCGGAGGAGTTGGATGGGGTTGGCACCT
GGTGTCAATGTCGAGGGCGCCGGCGAGGAGCGCGTTATGCATGCATCGCGCAACAAGGGGCGATGTTGTTGA
Transcript >Pro_DTO377G3_2|g2470.t1
ATGAGTTCAAGCCTCGAAGCTAAGATCGTTGTGCTCGGCGCACAGGGAGTTGGAAAGACTGCCCTCGTGGACAGG
TACTGTAAAAACACATTCAACCCCGCCGCGGCTTCAACCATCGGCGCGTCGTTCGTGACGAAGCGCGTCCTCGAT
TCCACCTCCGACACAATAGTCAGATTACAGATATGGGACACAGCTGGACAGGAGAGGTTTCGCAGCATGTCGAGA
CTTTATTATAGAGGAGCTCAAGCAGTGCTCCTGTGCTATGATATCACCGACCAAAACAGCTTCCAAGAAATGGCC
GGCTGGCTGCGCGAACTCCGCAAGAACATCACACCCAACGACGATGGCACAGACTCCCTCATAATACATGTCGTA
GGTACAAAGTCTGACCTTGTCGCGGACGACCCCTCCTCCCGCCGCGTTCCCTTCGAACGCACAATCGCCTACGTC
GCTGAACAACTCTACCCATCCCAAGCCTCCACCCCGCCACCAACCGCAACAGCAGGCATGGGCGGGCTAGGCTTT
GGAACATCTGTTTTTGGAGGCAGTGGCTGCAGTACATCGAACGCTAGTGCCGGCCCTGCAGCACACTCGTCCACT
GCCCTGCAGAGTCCGGACTCGAAACGCAGTTCAGCATTCTGGGGACAGGAGATTGGGTGGGATTGCTGTCATGAG
ATCAGTGCACGGGATGGCGAGGGAATTGATGAGGTTTTCCGCGTTATCACGCGTAAGCTGGTTGAGCAGCGCAAC
CGGCGGGATACTGAGCTGGCTTTGTCGATTGCTGGTACGCCCTTGGCGAATGGGGTCGTTGGGCCCTTTAATCCT
GGGGTTGTGGAGGGCACGGGCAGTTTCCGCCTTGGTCATGGTGATAAGCGGAGGAGTTGGATGGGGTTGGCACCT
GGTGTCAATGTCGAGGGCGCCGGCGAGGAGCGCGTTATGCATGCATCGCGCAACAAGGGGCGATGTTGTTGA
Gene >Pro_DTO377G3_2|g2470.t1
ATGAGTTCAAGCCTCGAAGCTAAGATCGTTGTGCTCGGCGCACAGGGTATGTTGGCTGTGAATTACCCAGTTCTA
AATCTCATAATCACTTTACTAACCTTATCTCAACTAGGAGTTGGAAAGACTGCCCTCGTGGACAGGTACTGTAAA
AACACATTCAACCCCGCCGCGGCTTCAACCATCGGCGCGTCGTTCGTGACGAAGCGCGTCCTCGATTCCACCTCC
GACACAATAGTCAGATTACAGATATGGGACACAGCTGGACAGGAGAGGTTTCGCAGCATGTCGAGACTTTATTAT
AGAGGAGCTCAAGCAGTGCTCCTGTGCTATGATGTCAGTGCATCCACTTCCACACCGTTTCCCCTCTTCATTCAT
CCTGCGATTGTATTTGTTGCCTATACATAGGCAACCTACAACGTGATACAACCCACATAAACATGAATACTAACT
TGCACAGATCACCGACCAAAACAGCTTCCAAGAAATGGCCGGCTGGCTGCGCGAACTCCGCAAGAACATCACACC
CAACGACGATGGCACAGACTCCCTCATAATACATGTCGTAGGTACAAAGTCTGACCTTGTCGCGGACGACCCCTC
CTCCCGCCGCGTTCCCTTCGAACGCACAATCGCCTACGTCGCTGAACAACTCTACCCATCCCAAGCCTCCACCCC
GCCACCAACCGCAACAGCAGGCATGGGCGGGCTAGGCTTTGGAACATCTGTTTTTGGAGGCAGTGGCTGCAGTAC
ATCGAACGCTAGTGCCGGCCCTGCAGCACACTCGTCCACTGCCCTGCAGAGTCCGGACTCGAAACGCAGTTCAGC
ATTCTGGGGACAGGAGATTGGGTGGGATTGCTGTCATGAGATCAGTGCACGGGATGGCGAGGGAATTGATGAGGT
TTTCCGCGTTATCACGCGTAAGCTGGTTGAGCAGCGCAACCGGCGGGATACTGAGCTGGCTTTGTCGATTGCTGG
TACGCCCTTGGCGAATGGGGTCGTTGGGCCCTTTAATCCTGGGGTTGTGGAGGGCACGGGCAGTTTCCGCCTTGG
TCATGGTGATAAGCGGAGGAGTTGGATGGGGTTGGCACCTGGTGTCAATGTCGAGGGCGCCGGCGAGGAGCGCGT
TATGCATGCATCGCGCAACAAGGGGCGATGTTGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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