© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g2456.t1 |
| Gene name | |
| Location | scaffold_03:85267..87069 |
| Strand | + |
| Gene length (bp) | 1802 |
| Transcript length (bp) | 1566 |
| Coding sequence length (bp) | 1566 |
| Protein length (aa) | 522 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00324 | AA_permease | Amino acid permease | 8.3E-115 | 55 | 466 |
| PF13520 | AA_permease_2 | Amino acid permease | 1.6E-29 | 48 | 449 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 45 | 64 | 19 |
| 2 | 68 | 90 | 22 |
| 3 | 97 | 119 | 22 |
| 4 | 124 | 142 | 18 |
| 5 | 149 | 171 | 22 |
| 6 | 202 | 224 | 22 |
| 7 | 237 | 256 | 19 |
| 8 | 291 | 313 | 22 |
| 9 | 334 | 356 | 22 |
| 10 | 366 | 388 | 22 |
| 11 | 408 | 430 | 22 |
| 12 | 440 | 459 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g2456.t1 MDSDVEKKAPTIVEPAESLPSAHDDVSVGELNPLKRNLKNRHMQMIAVGGAIGAGGLLSVRALGELAVLYPVNGA FFTYCVRFISPAWGFAVGWDYAIGWLIILPFELTAASLTIQYWSETLNSGIWVAVFLVVLTAIQFFGVRGYGEVE FVLGMIKVIAVIGFIILGIVIDCGGAPNGGYIGAHYWHDPGAFTTFRGFCSVFVTAAFAFGGTEMAGLAAAEAAN PAKSIPKASKQVFWRIMIFYVLGTFIVGLIVPSDADWLLGASGANTKASPFVVSIQNAGISGLPSVMNAIITISV ISVANSATYGSSRTIQSLASRGMAPRFMAYIDKGGRPLYCIILQIAFGLLAFINEAPSGSTIFDWLLALSGISDF FIWGSICLAHIRFRSAWAHNGHSVNELAYAAPLGVVGSYIGLGLNILCLIAEFYVSVASKDAETFFMNYIAAPLV ILLFVVWLLYTKWNKDPRLDRGGWFIPIEKMDVHSFIRDSALDVDLPPRVEYATWGAWFKAAPMRIARSLI* |
| Coding | >Pro_DTO377G3_2|g2456.t1 ATGGACTCAGACGTCGAGAAGAAAGCACCCACTATTGTGGAGCCAGCTGAAAGTCTCCCTTCAGCTCACGATGAT GTTAGCGTCGGTGAACTCAACCCGCTGAAGCGGAACCTGAAGAACCGCCATATGCAGATGATCGCTGTTGGTGGC GCTATTGGAGCTGGGGGTCTGCTCTCCGTACGGGCCTTGGGCGAGTTGGCCGTGCTATATCCCGTGAACGGAGCC TTTTTCACATACTGCGTACGGTTCATTAGCCCAGCCTGGGGATTCGCAGTCGGCTGGGACTACGCTATTGGATGG CTCATCATTCTTCCCTTCGAACTTACGGCCGCAAGTTTGACAATTCAGTACTGGAGTGAAACTTTGAACAGCGGA ATCTGGGTGGCAGTGTTTCTAGTCGTTCTAACTGCGATCCAGTTCTTCGGAGTTCGAGGCTACGGAGAAGTCGAA TTCGTGCTGGGGATGATCAAGGTCATTGCCGTGATTGGCTTCATCATCCTTGGAATTGTGATCGATTGCGGTGGC GCCCCGAACGGAGGTTACATAGGAGCCCATTACTGGCATGACCCTGGTGCATTCACAACATTCAGAGGGTTCTGT TCGGTCTTTGTGACAGCAGCCTTCGCCTTCGGTGGTACAGAAATGGCTGGCCTTGCTGCTGCAGAGGCGGCAAAC CCCGCCAAGTCCATCCCCAAGGCATCCAAGCAGGTCTTCTGGCGCATTATGATCTTCTATGTCCTGGGCACCTTT ATAGTTGGCCTGATTGTTCCTTCTGACGCCGACTGGCTTCTCGGAGCATCTGGCGCCAACACCAAGGCTTCTCCA TTTGTCGTATCAATCCAGAATGCCGGTATCTCTGGATTGCCCTCTGTTATGAATGCGATCATCACTATTTCAGTT ATCAGCGTGGCGAACTCCGCGACATATGGCTCAAGCCGTACTATCCAGTCTTTGGCCTCCCGAGGCATGGCACCG AGATTCATGGCATATATTGACAAAGGTGGTCGGCCCCTTTACTGTATTATCCTGCAGATTGCTTTTGGTTTACTC GCTTTCATCAACGAGGCGCCATCAGGAAGCACCATTTTCGACTGGCTTCTTGCCTTGTCTGGTATCTCCGACTTC TTCATCTGGGGAAGTATCTGCCTTGCCCATATCCGCTTCCGCTCCGCCTGGGCGCATAACGGACACAGCGTGAAC GAGCTTGCCTATGCCGCTCCCCTTGGTGTGGTTGGGAGCTATATCGGTCTGGGTCTCAATATCTTGTGTCTCATC GCGGAATTTTATGTCTCTGTGGCTTCAAAGGATGCTGAAACATTCTTCATGAACTACATTGCTGCGCCGCTTGTG ATTCTACTTTTCGTCGTCTGGCTTCTTTACACCAAGTGGAATAAAGATCCCAGGCTCGACCGTGGAGGCTGGTTC ATCCCAATTGAGAAGATGGACGTCCACAGCTTCATAAGGGACTCTGCTCTCGATGTGGATCTTCCACCAAGAGTC GAGTATGCTACTTGGGGTGCTTGGTTCAAAGCTGCTCCTATGCGTATAGCTCGCTCATTAATTTGA |
| Transcript | >Pro_DTO377G3_2|g2456.t1 ATGGACTCAGACGTCGAGAAGAAAGCACCCACTATTGTGGAGCCAGCTGAAAGTCTCCCTTCAGCTCACGATGAT GTTAGCGTCGGTGAACTCAACCCGCTGAAGCGGAACCTGAAGAACCGCCATATGCAGATGATCGCTGTTGGTGGC GCTATTGGAGCTGGGGGTCTGCTCTCCGTACGGGCCTTGGGCGAGTTGGCCGTGCTATATCCCGTGAACGGAGCC TTTTTCACATACTGCGTACGGTTCATTAGCCCAGCCTGGGGATTCGCAGTCGGCTGGGACTACGCTATTGGATGG CTCATCATTCTTCCCTTCGAACTTACGGCCGCAAGTTTGACAATTCAGTACTGGAGTGAAACTTTGAACAGCGGA ATCTGGGTGGCAGTGTTTCTAGTCGTTCTAACTGCGATCCAGTTCTTCGGAGTTCGAGGCTACGGAGAAGTCGAA TTCGTGCTGGGGATGATCAAGGTCATTGCCGTGATTGGCTTCATCATCCTTGGAATTGTGATCGATTGCGGTGGC GCCCCGAACGGAGGTTACATAGGAGCCCATTACTGGCATGACCCTGGTGCATTCACAACATTCAGAGGGTTCTGT TCGGTCTTTGTGACAGCAGCCTTCGCCTTCGGTGGTACAGAAATGGCTGGCCTTGCTGCTGCAGAGGCGGCAAAC CCCGCCAAGTCCATCCCCAAGGCATCCAAGCAGGTCTTCTGGCGCATTATGATCTTCTATGTCCTGGGCACCTTT ATAGTTGGCCTGATTGTTCCTTCTGACGCCGACTGGCTTCTCGGAGCATCTGGCGCCAACACCAAGGCTTCTCCA TTTGTCGTATCAATCCAGAATGCCGGTATCTCTGGATTGCCCTCTGTTATGAATGCGATCATCACTATTTCAGTT ATCAGCGTGGCGAACTCCGCGACATATGGCTCAAGCCGTACTATCCAGTCTTTGGCCTCCCGAGGCATGGCACCG AGATTCATGGCATATATTGACAAAGGTGGTCGGCCCCTTTACTGTATTATCCTGCAGATTGCTTTTGGTTTACTC GCTTTCATCAACGAGGCGCCATCAGGAAGCACCATTTTCGACTGGCTTCTTGCCTTGTCTGGTATCTCCGACTTC TTCATCTGGGGAAGTATCTGCCTTGCCCATATCCGCTTCCGCTCCGCCTGGGCGCATAACGGACACAGCGTGAAC GAGCTTGCCTATGCCGCTCCCCTTGGTGTGGTTGGGAGCTATATCGGTCTGGGTCTCAATATCTTGTGTCTCATC GCGGAATTTTATGTCTCTGTGGCTTCAAAGGATGCTGAAACATTCTTCATGAACTACATTGCTGCGCCGCTTGTG ATTCTACTTTTCGTCGTCTGGCTTCTTTACACCAAGTGGAATAAAGATCCCAGGCTCGACCGTGGAGGCTGGTTC ATCCCAATTGAGAAGATGGACGTCCACAGCTTCATAAGGGACTCTGCTCTCGATGTGGATCTTCCACCAAGAGTC GAGTATGCTACTTGGGGTGCTTGGTTCAAAGCTGCTCCTATGCGTATAGCTCGCTCATTAATTTGA |
| Gene | >Pro_DTO377G3_2|g2456.t1 ATGGACTCAGACGTCGAGAAGAAAGCACCCACTATTGTGGAGCCAGCTGAAAGTCTCCCTTCAGCTCACGATGAT GTTAGCGTCGGTGAACTCAACCCGCTGAAGCGGAACCTGAAGAACCGCCATATGCAGATGATCGCTGTTGGTATG CGTCCTCGGACGGTTTTTACTTTTCTTCTGATGCTAATTTCAGTAAGGTGGCGCTATTGGAGCTGGGGGTCTGCT CTCCGTACGGGTGGGCCTGGGTCTTTGTTACTATGCTACTTGATCGTTGGAGGAATGCTTCTTCTTACAATTCAG GCCTTGGGCGAGTTGGCCGTGCTATATCCCGTGAACGGAGCCTTTTTCACATACTGCGTACGGTTCATTAGCCCA GCCTGGTGAGTTTTCCGTGTTCATGTGCTATATTCATGGTCAAAAGACTGACTCCTCATTTTATGATAGGGGATT CGCAGTCGGCTGGGACTACGCTATTGGATGGCTCATCATTCTTCCCTTCGAACTTACGGCCGCAAGTTTGACAAT TCAGTACTGGAGTGAAACTTTGAACAGCGGAATCTGGGTGGCAGTGTTTCTAGTCGTTCTAACTGCGATCCAGTT CTTCGGAGTTCGAGGCTACGGAGAAGGTGACAAAGCATTTATATCTTTACAAGATATATAAATACTAACGTCGGC ATATAGTCGAATTCGTGCTGGGGATGATCAAGGTCATTGCCGTGATTGGCTTCATCATCCTTGGAATTGTGATCG ATTGCGGTGGCGCCCCGAACGGAGGTTACATAGGAGCCCATTACTGGCATGACCCTGGTGCATTCACAACATTCA GAGGGTTCTGTTCGGTCTTTGTGACAGCAGCCTTCGCCTTCGGTGGTACAGAAATGGCTGGCCTTGCTGCTGCAG AGGCGGCAAACCCCGCCAAGTCCATCCCCAAGGCATCCAAGCAGGTCTTCTGGCGCATTATGATCTTCTATGTCC TGGGCACCTTTATAGTTGGCCTGATTGTTCCTTCTGACGCCGACTGGCTTCTCGGAGCATCTGGCGCCAACACCA AGGCTTCTCCATTTGTCGTATCAATCCAGAATGCCGGTATCTCTGGATTGCCCTCTGTTATGAATGCGATCATCA CTATTTCAGTTATCAGCGTGGCGAACTCCGCGACATATGGCTCAAGCCGTACTATCCAGTCTTTGGCCTCCCGAG GCATGGCACCGAGATTCATGGCATATATTGACAAAGGTGGTCGGCCCCTTTACTGTATTATCCTGCAGATTGCTT TTGGTTTACTCGCTTTCATCAACGAGGCGCCATCAGGAAGCACCATTTTCGACTGGCTTCTTGCCTTGTCTGGTA TCTCCGACTTCTTCATCTGGGGAAGTATCTGCCTTGCCCATATCCGCTTCCGCTCCGCCTGGGCGCATAACGGAC ACAGCGTGAACGAGCTTGCCTATGCCGCTCCCCTTGGTGTGGTTGGGAGCTATATCGGTCTGGGTCTCAATATCT TGTGTCTCATCGCGGAATTTTATGTCTCTGTGGCTTCAAAGGATGCTGAAACATTCTTCATGAACTACATTGCTG CGCCGCTTGTGATTCTACTTTTCGTCGTCTGGCTTCTTTACACCAAGTGGAATAAAGATCCCAGGCTCGACCGTG GAGGCTGGTTCATCCCAATTGAGAAGATGGACGTCCACAGCTTCATAAGGGACTCTGCTCTCGATGTGGATCTTC CACCAAGAGTCGAGTATGCTACTTGGGGTGCTTGGTTCAAAGCTGCTCCTATGCGTATAGCTCGCTCATTAATTT GA |