Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g2455.t1
Gene name
Location	scaffold_03:81294..82199
Strand	+
Gene length (bp)	905
Transcript length (bp)	603
Coding sequence length (bp)	603
Protein length (aa)	201

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00957	Synaptobrevin	Synaptobrevin	7.4E-16	138	194
PF13774	Longin	Regulated-SNARE-like domain	3.5E-12	45	120

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 49	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g2455.t1 MKILYMGVFRNDPKPAVELCGEKDLNGFSRFTRQSYDEFLMLFTRTVAERTKPGQRQDIEEKAYTFHTYGRTEGV AGVIVTDGDYPALVAHQVLSKIVDEFLAKYPRTAFSDPSLRENACPLPQLKEYIVKYQDPTQADSIMKIQQELDE TKIVLHKTIESVLERGEKIDTLVQKSDDLSSQSKKFYTQAKKQNSCCVVM*
Coding	>Pro_DTO377G3_2\|g2455.t1 ATGAAGATTCTTTATATGGGCGTTTTCCGGAACGACCCTAAGCCAGCTGTCGAGCTATGCGGGGAAAAGGACCTC AACGGCTTTTCGCGCTTTACTCGTCAGAGCTACGATGAATTCCTCATGCTCTTCACCCGAACGGTCGCCGAGAGG ACAAAGCCGGGCCAACGACAGGATATTGAGGAGAAGGCCTACACATTCCATACTTACGGACGGACAGAGGGTGTT GCCGGTGTTATTGTAACAGATGGGGACTATCCTGCCCTGGTGGCCCACCAGGTTTTGAGCAAGATTGTGGACGAG TTTCTTGCCAAGTACCCACGCACTGCCTTCTCCGACCCATCTTTGCGCGAGAATGCGTGCCCCCTGCCGCAGCTC AAGGAATATATCGTCAAGTACCAGGACCCAACCCAGGCCGACAGCATCATGAAGATCCAGCAGGAGCTTGACGAA ACCAAGATTGTCCTTCACAAGACGATCGAAAGTGTCCTGGAGCGCGGTGAGAAGATCGACACCCTGGTTCAGAAG AGTGACGATCTGTCAAGTCAGAGCAAGAAATTCTATACCCAGGCCAAGAAGCAAAACTCTTGCTGTGTTGTGATG TGA
Transcript	>Pro_DTO377G3_2\|g2455.t1 ATGAAGATTCTTTATATGGGCGTTTTCCGGAACGACCCTAAGCCAGCTGTCGAGCTATGCGGGGAAAAGGACCTC AACGGCTTTTCGCGCTTTACTCGTCAGAGCTACGATGAATTCCTCATGCTCTTCACCCGAACGGTCGCCGAGAGG ACAAAGCCGGGCCAACGACAGGATATTGAGGAGAAGGCCTACACATTCCATACTTACGGACGGACAGAGGGTGTT GCCGGTGTTATTGTAACAGATGGGGACTATCCTGCCCTGGTGGCCCACCAGGTTTTGAGCAAGATTGTGGACGAG TTTCTTGCCAAGTACCCACGCACTGCCTTCTCCGACCCATCTTTGCGCGAGAATGCGTGCCCCCTGCCGCAGCTC AAGGAATATATCGTCAAGTACCAGGACCCAACCCAGGCCGACAGCATCATGAAGATCCAGCAGGAGCTTGACGAA ACCAAGATTGTCCTTCACAAGACGATCGAAAGTGTCCTGGAGCGCGGTGAGAAGATCGACACCCTGGTTCAGAAG AGTGACGATCTGTCAAGTCAGAGCAAGAAATTCTATACCCAGGCCAAGAAGCAAAACTCTTGCTGTGTTGTGATG TGA
Gene	>Pro_DTO377G3_2\|g2455.t1 ATGAAGATTCTTTATATGGGCGTATGTTTTATCACAGCTTGGATTTGATTGAATATTAGCTGAGATACGGTACTT ATTTATCAACCTCGCAGGTTTTCCGGAACGACCCTAAGCCAGCTGTCGAGCTATGCGGGGAAAAGGACCTCAACG GGTAATTTCATATGCCCGCCCTGCAACTGACTGGAACAACCCGCTAATTGTCACTAGCTTTTCGCGCTTTACTCG TCAGAGGTATATCCACCCTTCCTCTCTTGGTCCGACACAGCTAGGTCACTAACCGCGAAGCGCTTAATAGCTACG ATGAATTCCTCATGCTCTTCACCCGAACGGTCGCCGAGAGGACAAAGCCGGGCCAACGACAGGATATTGAGGAGA AGGCCTACACATTCCATACTTACGGACGGACAGAGGGTGTTGCCGGTGTTATTGTAACAGATGGGGACTATCCTG CCCTGGTGGCCCACCAGGTTTTGAGCAAGATTGTGGACGAGTTTCTTGCCAAGTACCCACGCACTGCCTTCTCCG ACCCATCTTTGCGCGAGAATGCGTGCCCCCTGCCGCAGCTCAAGGAATATATCGTCAAGTACCAGGACCCAACCC AGGCCGACAGCATCATGAAGATCCAGCAGGAGCTTGACGAAACCAAGATTGTCCTTCACAAGACGGTATGCTCTT AGGTCTGTATGAGCCCATTATATGTGCTAACCATATCCAGATCGAAAGTGTCCTGGAGCGCGGTGAGAAGATCGA CACCCTGGTTCAGAAGAGTGACGATCTGTCAAGTCAGAGCAAGAAATTCTATACCCAGGTATGCAAATCAAGGGT CAAGGGTAGCTTTCACTTGAATGTATTAACACAAGTAATTCCAGGCCAAGAAGCAAAACTCTTGCTGTGTTGTGA TGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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