Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2452.t1
Gene name
Locationscaffold_03:70458..72390
Strand-
Gene length (bp)1932
Transcript length (bp)534
Coding sequence length (bp)534
Protein length (aa) 178

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00235 Profilin Profilin 5.9E-38 54 175

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2452.t1
MRNEAKTRNLILFWNLRGLSALIFTPVSPFFLYIQKRYSLSFFTVIMGEHSAIWQSYVDTSLMGSFQFDKAGILA
ADFSGVEAASPGFALSQEEINSLITAYTSSEKAFSSGFSVCGEKFVTIRADERSLYGKKGKEGVIIARASSCTII
GHHGENVQTTNAATVVENLVDYLNNPR*
Coding >Pro_DTO377G3_2|g2452.t1
ATGAGAAACGAGGCCAAAACTCGCAACCTCATTCTGTTTTGGAATTTGAGGGGCCTCTCGGCGTTAATATTCACG
CCCGTCTCTCCTTTTTTTCTGTATATTCAAAAGCGTTATTCTCTCAGCTTCTTTACAGTCATCATGGGCGAGCAC
TCAGCAATCTGGCAAAGCTATGTCGACACCAGCCTGATGGGCTCGTTTCAATTCGACAAGGCCGGTATTCTCGCC
GCTGACTTCTCCGGTGTTGAGGCTGCCTCGCCCGGCTTCGCGCTCTCTCAGGAGGAGATCAACTCCCTGATCACC
GCTTACACTTCTAGCGAGAAGGCCTTTTCCTCTGGCTTCTCTGTCTGCGGTGAGAAGTTCGTCACCATCCGGGCT
GACGAGCGCAGTCTATATGGCAAGAAGGGTAAGGAGGGTGTCATTATTGCCCGCGCCTCCTCTTGCACCATCATC
GGCCACCACGGCGAGAATGTCCAGACTACCAACGCGGCGACCGTTGTCGAGAACCTCGTTGATTACCTCAACAAC
CCCCGGTAA
Transcript >Pro_DTO377G3_2|g2452.t1
ATGAGAAACGAGGCCAAAACTCGCAACCTCATTCTGTTTTGGAATTTGAGGGGCCTCTCGGCGTTAATATTCACG
CCCGTCTCTCCTTTTTTTCTGTATATTCAAAAGCGTTATTCTCTCAGCTTCTTTACAGTCATCATGGGCGAGCAC
TCAGCAATCTGGCAAAGCTATGTCGACACCAGCCTGATGGGCTCGTTTCAATTCGACAAGGCCGGTATTCTCGCC
GCTGACTTCTCCGGTGTTGAGGCTGCCTCGCCCGGCTTCGCGCTCTCTCAGGAGGAGATCAACTCCCTGATCACC
GCTTACACTTCTAGCGAGAAGGCCTTTTCCTCTGGCTTCTCTGTCTGCGGTGAGAAGTTCGTCACCATCCGGGCT
GACGAGCGCAGTCTATATGGCAAGAAGGGTAAGGAGGGTGTCATTATTGCCCGCGCCTCCTCTTGCACCATCATC
GGCCACCACGGCGAGAATGTCCAGACTACCAACGCGGCGACCGTTGTCGAGAACCTCGTTGATTACCTCAACAAC
CCCCGGTAA
Gene >Pro_DTO377G3_2|g2452.t1
ATGAGAAACGAGGCCAAAACTCGCAACCTCATTCTGTTTTGGAATTTGAGGGGCCTCTCGGCGTTAATATTCACG
CCCGTGTGAGATGCTTATTTCCCGCCGGACGAATGAGCGCATTGGTCGACGGATTAGCTCGCTACCAGGCCGGAG
GCGTGTTTCACCTGGTCAAAACTGAGACAATGGCGTATTATTTTCCGTTTTACCCTTGAATCAGGGGGGTTTTGG
CTCTGGAGCAATAGCATTGGATGCCCACATACTCAGTACAGTGCAGGGTCATGAATGTCGTGACTCGTGAATTCT
CCAGCTTCGCATTGTGAGTCGCCAATGCAATGTGATGCCAAGCCTGTCTCTATTTCCAATGGGCATATCTCAAGG
TCTAAGTACTCCGTATGGTGTACGGAGTAAGAGACAAGGCTGCCTGAGACGAAGATAAGACCATCTGAGACGAAA
GATGAATCTGCTATTGGTAAGTAGCGGTCAGATCACCCCCTTGAAGTTTTGGGGTTTAGGCACTGTAAGGCAGCA
AAGCAGTAAGGCACCAAGGCATGCAGGCATACAGGCACTCAGGCACGCAAGGCAGCATGATGATCGAGTCCCGTG
ATCTCCCGTGATGATCGACGGTACATGAAGTGACTGGGCTAACTGGACTGGACTGGTACCGCGGCATGTTATATG
TATGTCATACATATTCAATGCTGTACTCGACATGACTGCCTAGAATCAACAGAAAAGTTGTTGATGTTAAGCTAC
TCTGTATATTTAAAGATCTCCCACCGCTACTTGGAGAATATCCGATATCTTATACACAACTCCACACCCTACACA
CCCTACACACCCTACACAATTATTACAATGTCCCTAGCATAGACAGATTGAATAAGATATTCCGAATCGACGCAT
CAATAGACATACATAAACAAAAATAAGCTTGTATCCCAAGTCAGTTGCAAACGGTGGGATCGTCATATGGCGGGG
TCCTCTCCCGACCGCCACAACTTCTTCTCCCCCCACCAACTCCCCTTATTCTCCCAGCTCTCCTTTTTTTCTGTA
TATTCAAAAGGTGCGCCCTGAAATTTCTGCTTTCTTCTCTTCTTGACTGTCTAACTCAATCAACTCCAGCGTTAT
TCTCTCAGCTTCTTTACAGTCATCATGGGCGAGCACTCAGCAATCTGGCAAAGTATGAATCACCTTGCACTGCAG
ACTGCAGACTGCAGACTGACAGGTCGGCCCTTGCTTCTTCGAGTTCGCTAACATGAGATTTCCCTCGAACCAGGC
TATGTCGACACCAGGTAAACCACTGTCCCTCGTCAACCCCAGATATATTCCTCAATGCTACCATCGAAACCGAAT
CATCTCACCCGTGTTATCCTGTACATATACTGACAAGCTTCTTTTCTCACAGCCTGATGGGCTCGTTTCAATTCG
ACAAGGCCGGTATTCTCGCCGCTGACTTCTCCGGTGTTGAGGCTGCCTCGCCCGGCTTCGCGGTAAGCTCGCCTA
TTGTTTTCCCTCGTGCGGGGTGGGGTCACAGGCTTCGACACATTCGCTAACGTTATTGGTTGTCGAAATACAGCT
CTCTCAGGAGGAGATCAACTCCCTGATCACCGCTTACACTTCTAGCGAGAAGGCCTTTTCCTCTGGCTTCTCTGT
CTGCGGTGAGAAGTTCGTCACCATCCGGGCTGACGAGCGCAGTCTATATGGCAAGAAGGTAAGCATATCCCTTCG
ACTCATAAATACCTCGGGAATTCTATCAACGCATACCACTGGAATCTGGTCTAATCTATTTGATTTGTGTTACAG
GGTAAGGAGGGTGTCATTATTGCCCGCGCCTCCTCTTGCACCATCATCGGCCACCACGGCGAGAATGTCCAGACT
ACCAACGCGGCGACCGTTGTCGAGAACCTCGTTGATTACCTCAACAACCCCCGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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