© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g2452.t1 |
| Gene name | |
| Location | scaffold_03:70458..72390 |
| Strand | - |
| Gene length (bp) | 1932 |
| Transcript length (bp) | 534 |
| Coding sequence length (bp) | 534 |
| Protein length (aa) | 178 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00235 | Profilin | Profilin | 1.6E-38 | 54 | 175 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003779 | actin binding | Yes |
| GO:0005515 | protein binding | No |
| GO:0008092 | cytoskeletal protein binding | No |
| GO:0005488 | binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 22 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g2452.t1 MRNEAKTRNLILFWNLRGLSALIFTPVSPFFLYIQKRYSLSFFTVIMGEHSAIWQSYVDTSLMGSFQFDKAGILA ADFSGVEAASPGFALSQEEINSLITAYTSSEKAFSSGFSVCGEKFVTIRADERSLYGKKGKEGVIIARASSCTII GHHGENVQTTNAATVVENLVDYLNNPR* |
| Coding | >Pro_DTO377G3_2|g2452.t1 ATGAGAAACGAGGCCAAAACTCGCAACCTCATTCTGTTTTGGAATTTGAGGGGCCTCTCGGCGTTAATATTCACG CCCGTCTCTCCTTTTTTTCTGTATATTCAAAAGCGTTATTCTCTCAGCTTCTTTACAGTCATCATGGGCGAGCAC TCAGCAATCTGGCAAAGCTATGTCGACACCAGCCTGATGGGCTCGTTTCAATTCGACAAGGCCGGTATTCTCGCC GCTGACTTCTCCGGTGTTGAGGCTGCCTCGCCCGGCTTCGCGCTCTCTCAGGAGGAGATCAACTCCCTGATCACC GCTTACACTTCTAGCGAGAAGGCCTTTTCCTCTGGCTTCTCTGTCTGCGGTGAGAAGTTCGTCACCATCCGGGCT GACGAGCGCAGTCTATATGGCAAGAAGGGTAAGGAGGGTGTCATTATTGCCCGCGCCTCCTCTTGCACCATCATC GGCCACCACGGCGAGAATGTCCAGACTACCAACGCGGCGACCGTTGTCGAGAACCTCGTTGATTACCTCAACAAC CCCCGGTAA |
| Transcript | >Pro_DTO377G3_2|g2452.t1 ATGAGAAACGAGGCCAAAACTCGCAACCTCATTCTGTTTTGGAATTTGAGGGGCCTCTCGGCGTTAATATTCACG CCCGTCTCTCCTTTTTTTCTGTATATTCAAAAGCGTTATTCTCTCAGCTTCTTTACAGTCATCATGGGCGAGCAC TCAGCAATCTGGCAAAGCTATGTCGACACCAGCCTGATGGGCTCGTTTCAATTCGACAAGGCCGGTATTCTCGCC GCTGACTTCTCCGGTGTTGAGGCTGCCTCGCCCGGCTTCGCGCTCTCTCAGGAGGAGATCAACTCCCTGATCACC GCTTACACTTCTAGCGAGAAGGCCTTTTCCTCTGGCTTCTCTGTCTGCGGTGAGAAGTTCGTCACCATCCGGGCT GACGAGCGCAGTCTATATGGCAAGAAGGGTAAGGAGGGTGTCATTATTGCCCGCGCCTCCTCTTGCACCATCATC GGCCACCACGGCGAGAATGTCCAGACTACCAACGCGGCGACCGTTGTCGAGAACCTCGTTGATTACCTCAACAAC CCCCGGTAA |
| Gene | >Pro_DTO377G3_2|g2452.t1 ATGAGAAACGAGGCCAAAACTCGCAACCTCATTCTGTTTTGGAATTTGAGGGGCCTCTCGGCGTTAATATTCACG CCCGTGTGAGATGCTTATTTCCCGCCGGACGAATGAGCGCATTGGTCGACGGATTAGCTCGCTACCAGGCCGGAG GCGTGTTTCACCTGGTCAAAACTGAGACAATGGCGTATTATTTTCCGTTTTACCCTTGAATCAGGGGGGTTTTGG CTCTGGAGCAATAGCATTGGATGCCCACATACTCAGTACAGTGCAGGGTCATGAATGTCGTGACTCGTGAATTCT CCAGCTTCGCATTGTGAGTCGCCAATGCAATGTGATGCCAAGCCTGTCTCTATTTCCAATGGGCATATCTCAAGG TCTAAGTACTCCGTATGGTGTACGGAGTAAGAGACAAGGCTGCCTGAGACGAAGATAAGACCATCTGAGACGAAA GATGAATCTGCTATTGGTAAGTAGCGGTCAGATCACCCCCTTGAAGTTTTGGGGTTTAGGCACTGTAAGGCAGCA AAGCAGTAAGGCACCAAGGCATGCAGGCATACAGGCACTCAGGCACGCAAGGCAGCATGATGATCGAGTCCCGTG ATCTCCCGTGATGATCGACGGTACATGAAGTGACTGGGCTAACTGGACTGGACTGGTACCGCGGCATGTTATATG TATGTCATACATATTCAATGCTGTACTCGACATGACTGCCTAGAATCAACAGAAAAGTTGTTGATGTTAAGCTAC TCTGTATATTTAAAGATCTCCCACCGCTACTTGGAGAATATCCGATATCTTATACACAACTCCACACCCTACACA CCCTACACACCCTACACAATTATTACAATGTCCCTAGCATAGACAGATTGAATAAGATATTCCGAATCGACGCAT CAATAGACATACATAAACAAAAATAAGCTTGTATCCCAAGTCAGTTGCAAACGGTGGGATCGTCATATGGCGGGG TCCTCTCCCGACCGCCACAACTTCTTCTCCCCCCACCAACTCCCCTTATTCTCCCAGCTCTCCTTTTTTTCTGTA TATTCAAAAGGTGCGCCCTGAAATTTCTGCTTTCTTCTCTTCTTGACTGTCTAACTCAATCAACTCCAGCGTTAT TCTCTCAGCTTCTTTACAGTCATCATGGGCGAGCACTCAGCAATCTGGCAAAGTATGAATCACCTTGCACTGCAG ACTGCAGACTGCAGACTGACAGGTCGGCCCTTGCTTCTTCGAGTTCGCTAACATGAGATTTCCCTCGAACCAGGC TATGTCGACACCAGGTAAACCACTGTCCCTCGTCAACCCCAGATATATTCCTCAATGCTACCATCGAAACCGAAT CATCTCACCCGTGTTATCCTGTACATATACTGACAAGCTTCTTTTCTCACAGCCTGATGGGCTCGTTTCAATTCG ACAAGGCCGGTATTCTCGCCGCTGACTTCTCCGGTGTTGAGGCTGCCTCGCCCGGCTTCGCGGTAAGCTCGCCTA TTGTTTTCCCTCGTGCGGGGTGGGGTCACAGGCTTCGACACATTCGCTAACGTTATTGGTTGTCGAAATACAGCT CTCTCAGGAGGAGATCAACTCCCTGATCACCGCTTACACTTCTAGCGAGAAGGCCTTTTCCTCTGGCTTCTCTGT CTGCGGTGAGAAGTTCGTCACCATCCGGGCTGACGAGCGCAGTCTATATGGCAAGAAGGTAAGCATATCCCTTCG ACTCATAAATACCTCGGGAATTCTATCAACGCATACCACTGGAATCTGGTCTAATCTATTTGATTTGTGTTACAG GGTAAGGAGGGTGTCATTATTGCCCGCGCCTCCTCTTGCACCATCATCGGCCACCACGGCGAGAATGTCCAGACT ACCAACGCGGCGACCGTTGTCGAGAACCTCGTTGATTACCTCAACAACCCCCGGTAA |