Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2451.t1
Gene name
Locationscaffold_03:69289..69976
Strand+
Gene length (bp)687
Transcript length (bp)420
Coding sequence length (bp)420
Protein length (aa) 140

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04178 Got1 Got1/Sft2-like family 1.2E-14 13 115

GO

GO Term Description Terminal node
GO:0016192 vesicle-mediated transport Yes
GO:0008150 biological_process No
GO:0006810 transport No
GO:0051234 establishment of localization No
GO:0051179 localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 12 0.5

Transmembrane Domains

Domain # Start End Length
1 12 31 19
2 35 54 19
3 67 86 19
4 96 118 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2451.t1
MPSMWLTENQKIGVIFCSAGGLFLFGGVLMFFDRSLLAMGNVLFLIGLTLIIGVRKTTVFFTRPQKLKGTAAFAA
GILLILFRWPLTGFLIELYGLFILFGDFLVTIGQFAGNIPVVGPYIQRGLEVLAGGRSNAELPV*
Coding >Pro_DTO377G3_2|g2451.t1
ATGCCTAGCATGTGGTTAACAGAGAACCAGAAGATCGGTGTGATCTTCTGCTCCGCCGGAGGCTTGTTCCTATTT
GGAGGAGTATTGATGTTCTTTGACCGGTCATTACTCGCCATGGGAAATGTCCTCTTTCTCATCGGATTGACTCTG
ATTATTGGCGTCAGGAAAACCACGGTCTTCTTCACGCGCCCGCAAAAACTCAAGGGCACTGCTGCTTTCGCCGCT
GGTATCCTCCTTATTCTCTTCCGCTGGCCCTTGACTGGGTTTTTGATAGAACTCTACGGCTTGTTCATCCTGTTT
GGCGACTTCCTGGTCACCATCGGTCAATTTGCGGGCAACATCCCTGTGGTAGGGCCGTATATCCAGCGTGGGCTG
GAGGTGCTTGCTGGTGGGAGGAGCAATGCCGAGCTTCCTGTATGA
Transcript >Pro_DTO377G3_2|g2451.t1
ATGCCTAGCATGTGGTTAACAGAGAACCAGAAGATCGGTGTGATCTTCTGCTCCGCCGGAGGCTTGTTCCTATTT
GGAGGAGTATTGATGTTCTTTGACCGGTCATTACTCGCCATGGGAAATGTCCTCTTTCTCATCGGATTGACTCTG
ATTATTGGCGTCAGGAAAACCACGGTCTTCTTCACGCGCCCGCAAAAACTCAAGGGCACTGCTGCTTTCGCCGCT
GGTATCCTCCTTATTCTCTTCCGCTGGCCCTTGACTGGGTTTTTGATAGAACTCTACGGCTTGTTCATCCTGTTT
GGCGACTTCCTGGTCACCATCGGTCAATTTGCGGGCAACATCCCTGTGGTAGGGCCGTATATCCAGCGTGGGCTG
GAGGTGCTTGCTGGTGGGAGGAGCAATGCCGAGCTTCCTGTATGA
Gene >Pro_DTO377G3_2|g2451.t1
ATGCCTAGCATGTGGTTAACAGAGAACCAGAGTCAGTCGCATTCGCTCTACAAGCTGTGATGTTCACTACCGTGA
CAGTACATGTGTAGCAATTGTCGAGCATAGGCTAATTTATATAACAGAGATCGGTGTGATCTTCTGCTCCGCCGG
TACGAGATCGACGTTCCCAAATCACTAATTACTCGGACCCGAGAACTAATTCATTTTGCTAATTAGGAGGCTTGT
TCCTATTTGGAGGAGTATTGATGTTCTTTGACCGGTCATTGTATGTCTATCCAGACGTTTCACGTTTTCGGGAGA
ATAAATGCTAATGCCTGTTAACTAGACTCGCCATGGGAAATGTGTGCCACATGCTCTAACAAAACTGTTACATCT
AACTGACAATGCTAGGTCCTCTTTCTCATCGGATTGACTCTGATTATTGGCGTCAGGAAAACCACGGTCTTCTTC
ACGCGCCCGCAAAAACTCAAGGGCACTGCTGCTTTCGCCGCTGGTATCCTCCTTATTCTCTTCCGCTGGCCCTTG
ACTGGGTTTTTGATAGAACTCTACGGCTTGTTCATCCTGTTTGGCGACTTCCTGGTCACCATCGGTCAATTTGCG
GGCAACATCCCTGTGGTAGGGCCGTATATCCAGCGTGGGCTGGAGGTGCTTGCTGGTGGGAGGAGCAATGCCGAG
CTTCCTGTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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