Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2449.t1
Gene name
Locationscaffold_03:67172..67612
Strand-
Gene length (bp)440
Transcript length (bp)219
Coding sequence length (bp)219
Protein length (aa) 73

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08650 DASH_Dad4 DASH complex subunit Dad4 4.3E-32 1 71

GO

GO Term Description Terminal node
GO:0042729 DASH complex Yes
GO:0008608 attachment of spindle microtubules to kinetochore Yes
GO:0072686 mitotic spindle Yes
GO:0043228 non-membrane-bounded organelle No
GO:0022402 cell cycle process No
GO:0008150 biological_process No
GO:0032991 protein-containing complex No
GO:0043232 intracellular non-membrane-bounded organelle No
GO:0009987 cellular process No
GO:0043226 organelle No
GO:0005819 spindle No
GO:0110165 cellular anatomical entity No
GO:0140513 nuclear protein-containing complex No
GO:0043229 intracellular organelle No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2449.t1
MESPHEHQQTVLLSRIITNVEKLNEAIMVMNKGLQEVNIQNMNVELVAQMFKNYQSNVLFHLEATENLQDPS*
Coding >Pro_DTO377G3_2|g2449.t1
ATGGAAAGCCCCCACGAGCATCAGCAGACGGTGCTGCTCTCTCGCATCATCACCAACGTCGAGAAGCTCAATGAA
GCCATTATGGTCATGAACAAAGGTCTCCAGGAAGTCAACATCCAGAACATGAACGTTGAGCTTGTGGCGCAGATG
TTTAAGAACTACCAGTCTAATGTTCTCTTCCATCTTGAAGCTACCGAGAACCTCCAAGACCCATCCTGA
Transcript >Pro_DTO377G3_2|g2449.t1
ATGGAAAGCCCCCACGAGCATCAGCAGACGGTGCTGCTCTCTCGCATCATCACCAACGTCGAGAAGCTCAATGAA
GCCATTATGGTCATGAACAAAGGTCTCCAGGAAGTCAACATCCAGAACATGAACGTTGAGCTTGTGGCGCAGATG
TTTAAGAACTACCAGTCTAATGTTCTCTTCCATCTTGAAGCTACCGAGAACCTCCAAGACCCATCCTGA
Gene >Pro_DTO377G3_2|g2449.t1
ATGGTACGCGGTTTCTCTTCCCTGTATCAATTTTGATGCGATCTGAAAGATCCCAGATGCTGATCTCTCCTTAGG
AAAGCCCCCACGAGCATCAGCAGACGGTGCTGCTCTCTCGCATCATCACCAACGTCGTATGTGACTGAACCACGT
CTGCAAGATATACTCTACTCAACTCATACATAGGAGAAGCTCAATGAAGCCATTATGGTCATGAACAAAGGTCTC
CAGGTAGGTTCAAGCCTCTCATTGATATTATCATGTTATTGACTCTATCACAGGAAGTCAACATCCAGAACATGA
ACGTTGAGCTTGTGGCGCAGATGTTTAAGAACTACCAGTCTAATGTTCTCTTCCATCTTGAAGGTATATATGACT
ATCATATATCAGAAAACCTCTACTAATACCCTCTAGCTACCGAGAACCTCCAAGACCCATCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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