Protein ID | Pro_DTO377G3_2|g2441.t1 |
Gene name | |
Location | scaffold_03:44277..46081 |
Strand | + |
Gene length (bp) | 1804 |
Transcript length (bp) | 1701 |
Coding sequence length (bp) | 1701 |
Protein length (aa) | 567 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00732 | GMC_oxred_N | GMC oxidoreductase | 1.8E-52 | 7 | 303 |
PF05199 | GMC_oxred_C | GMC oxidoreductase | 1.5E-32 | 417 | 550 |
PF05834 | Lycopene_cycl | Lycopene cyclase protein | 1.3E-05 | 8 | 41 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | Yes |
GO:0050660 | flavin adenine dinucleotide binding | Yes |
GO:1901265 | nucleoside phosphate binding | No |
GO:0016491 | oxidoreductase activity | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0005488 | binding | No |
GO:0043167 | ion binding | No |
GO:0000166 | nucleotide binding | No |
GO:0043168 | anion binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0003674 | molecular_function | No |
GO:0003824 | catalytic activity | No |
GO:0036094 | small molecule binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 23 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g2441.t1 MESKNTYDFVIVGGGPAGCTVAAGLAKSAQRPKVLLLEAGGRNDDKALRVNGKRWTTLREPSMNWGYRTTPQEYC NGHDGDYSRGKGLGGSSAINFGVFAIGARDDYDEWASEVDDDTFGWKEMHIRYKNLETFDGRVLPKNQKYVRSVA SDHGHSGPLRVGYAQDWERDLAPTLDAFEVAGHKLNLDHNSGNPLGMAATINSAWKGERTTAVDMFENVPHNLVV VTDSPVQRVLLEGKKAVGVEAQGTKYFASRDVILSAGTLDTPKILMHSGIGPAKELEKFNISVVNDLPAIGQGLR DHYLVPLVLARNPETNDRNSFFKDPAAMEAAMKEWLHDNTGLWNRYCCQIGTGWFKSDRITASPEFKALPTSVQE FLNRETIPHYEIATHMPLHCMKPEMFKDYSYSCLVAFMINEQSRGEVHLQSSDPDVPLLFDPRFLGHPYDRRACI EIYRHLLDVSRQECFAKDTISTLMGPASDSDEDILEFWKNTLCSSWHMTGTVKMGKTGASDAAVDTRFRVRGMEN LRVADMSVVPVLTNNHTQATAYVTGITCADILIKEYGLDKQ* |
Coding | >Pro_DTO377G3_2|g2441.t1 ATGGAATCTAAAAACACATACGACTTTGTCATCGTCGGAGGTGGCCCAGCTGGTTGCACCGTGGCTGCGGGGCTC GCCAAATCAGCCCAAAGACCTAAAGTTCTACTTCTTGAAGCAGGTGGGCGCAATGATGACAAAGCTTTGCGAGTG AATGGAAAGCGTTGGACGACATTGAGGGAACCAAGCATGAACTGGGGGTACAGGACCACACCACAGGAATATTGC AATGGGCACGATGGCGACTATTCCCGTGGAAAGGGTCTGGGAGGTAGCTCGGCAATCAACTTCGGGGTCTTTGCT ATAGGCGCGCGGGATGACTACGATGAGTGGGCATCTGAGGTGGATGACGATACCTTCGGATGGAAGGAGATGCAT ATCCGCTACAAGAATTTGGAGACCTTCGATGGTCGTGTACTTCCAAAAAATCAGAAATATGTCCGTTCGGTTGCT TCCGACCACGGCCACTCGGGTCCCTTGCGCGTCGGGTATGCCCAGGATTGGGAAAGGGACTTGGCACCCACGCTG GATGCATTCGAAGTGGCTGGACACAAGCTCAACTTGGATCACAACTCCGGCAATCCCCTTGGCATGGCTGCAACA ATCAATTCTGCTTGGAAGGGAGAGCGTACCACGGCTGTTGATATGTTTGAAAATGTTCCTCATAATCTTGTCGTT GTCACAGACAGCCCAGTACAGCGGGTCTTGTTGGAAGGCAAAAAGGCCGTTGGAGTAGAGGCTCAGGGCACAAAG TACTTCGCTTCTCGAGATGTGATTCTTTCTGCAGGCACACTCGACACCCCAAAGATTCTAATGCACTCTGGAATC GGACCGGCTAAAGAGCTTGAGAAGTTCAACATTTCAGTGGTCAACGATCTACCCGCCATTGGCCAGGGTCTCCGA GACCACTACTTGGTTCCTCTGGTTCTTGCCCGTAACCCTGAGACAAATGACCGCAATTCCTTCTTCAAAGATCCC GCCGCCATGGAGGCTGCAATGAAAGAGTGGCTTCACGACAACACCGGCCTATGGAACCGATACTGCTGCCAGATC GGCACCGGCTGGTTTAAATCAGACCGTATCACCGCCTCGCCCGAATTCAAAGCGCTTCCAACATCCGTGCAAGAG TTCCTGAACCGCGAAACCATCCCCCACTACGAGATAGCCACCCACATGCCCCTCCATTGCATGAAGCCCGAAATG TTCAAAGATTACAGCTATAGCTGTCTTGTAGCATTCATGATAAACGAACAATCCCGCGGCGAAGTGCACCTGCAG TCCTCTGACCCAGACGTCCCGCTGCTGTTCGACCCGCGGTTCCTCGGACATCCATACGATCGTCGCGCTTGTATC GAAATTTATCGGCACCTGCTCGATGTCAGTAGACAGGAGTGCTTTGCGAAGGACACTATCTCAACGCTGATGGGG CCTGCGTCTGATTCCGACGAGGACATCCTCGAGTTCTGGAAGAACACGCTCTGTTCCAGCTGGCACATGACTGGC ACGGTGAAGATGGGCAAGACTGGTGCCAGTGATGCTGCTGTTGACACGCGTTTCCGTGTTCGGGGCATGGAGAAC CTCCGCGTTGCTGATATGAGTGTTGTTCCTGTCCTCACTAATAACCACACCCAGGCTACTGCTTACGTGACTGGT ATTACTTGTGCTGATATCCTTATCAAGGAATATGGCCTCGATAAACAGTAA |
Transcript | >Pro_DTO377G3_2|g2441.t1 ATGGAATCTAAAAACACATACGACTTTGTCATCGTCGGAGGTGGCCCAGCTGGTTGCACCGTGGCTGCGGGGCTC GCCAAATCAGCCCAAAGACCTAAAGTTCTACTTCTTGAAGCAGGTGGGCGCAATGATGACAAAGCTTTGCGAGTG AATGGAAAGCGTTGGACGACATTGAGGGAACCAAGCATGAACTGGGGGTACAGGACCACACCACAGGAATATTGC AATGGGCACGATGGCGACTATTCCCGTGGAAAGGGTCTGGGAGGTAGCTCGGCAATCAACTTCGGGGTCTTTGCT ATAGGCGCGCGGGATGACTACGATGAGTGGGCATCTGAGGTGGATGACGATACCTTCGGATGGAAGGAGATGCAT ATCCGCTACAAGAATTTGGAGACCTTCGATGGTCGTGTACTTCCAAAAAATCAGAAATATGTCCGTTCGGTTGCT TCCGACCACGGCCACTCGGGTCCCTTGCGCGTCGGGTATGCCCAGGATTGGGAAAGGGACTTGGCACCCACGCTG GATGCATTCGAAGTGGCTGGACACAAGCTCAACTTGGATCACAACTCCGGCAATCCCCTTGGCATGGCTGCAACA ATCAATTCTGCTTGGAAGGGAGAGCGTACCACGGCTGTTGATATGTTTGAAAATGTTCCTCATAATCTTGTCGTT GTCACAGACAGCCCAGTACAGCGGGTCTTGTTGGAAGGCAAAAAGGCCGTTGGAGTAGAGGCTCAGGGCACAAAG TACTTCGCTTCTCGAGATGTGATTCTTTCTGCAGGCACACTCGACACCCCAAAGATTCTAATGCACTCTGGAATC GGACCGGCTAAAGAGCTTGAGAAGTTCAACATTTCAGTGGTCAACGATCTACCCGCCATTGGCCAGGGTCTCCGA GACCACTACTTGGTTCCTCTGGTTCTTGCCCGTAACCCTGAGACAAATGACCGCAATTCCTTCTTCAAAGATCCC GCCGCCATGGAGGCTGCAATGAAAGAGTGGCTTCACGACAACACCGGCCTATGGAACCGATACTGCTGCCAGATC GGCACCGGCTGGTTTAAATCAGACCGTATCACCGCCTCGCCCGAATTCAAAGCGCTTCCAACATCCGTGCAAGAG TTCCTGAACCGCGAAACCATCCCCCACTACGAGATAGCCACCCACATGCCCCTCCATTGCATGAAGCCCGAAATG TTCAAAGATTACAGCTATAGCTGTCTTGTAGCATTCATGATAAACGAACAATCCCGCGGCGAAGTGCACCTGCAG TCCTCTGACCCAGACGTCCCGCTGCTGTTCGACCCGCGGTTCCTCGGACATCCATACGATCGTCGCGCTTGTATC GAAATTTATCGGCACCTGCTCGATGTCAGTAGACAGGAGTGCTTTGCGAAGGACACTATCTCAACGCTGATGGGG CCTGCGTCTGATTCCGACGAGGACATCCTCGAGTTCTGGAAGAACACGCTCTGTTCCAGCTGGCACATGACTGGC ACGGTGAAGATGGGCAAGACTGGTGCCAGTGATGCTGCTGTTGACACGCGTTTCCGTGTTCGGGGCATGGAGAAC CTCCGCGTTGCTGATATGAGTGTTGTTCCTGTCCTCACTAATAACCACACCCAGGCTACTGCTTACGTGACTGGT ATTACTTGTGCTGATATCCTTATCAAGGAATATGGCCTCGATAAACAGTAA |
Gene | >Pro_DTO377G3_2|g2441.t1 ATGGAATCTAAAAACACATACGACTTTGTCATCGTCGGAGGTAATCGTGCACTATACACACCTGCAATCTCTCAT GCTCATCATTGAACAGGTGGCCCAGCTGGTTGCACCGTGGCTGCGGGGCTCGCCAAATCAGCCCAAAGACCTAAA GTTCTACTTCTTGAAGCAGGTGGGCGCAATGATGACAAAGCTTTGCGAGTGAATGGAAAGCGTTGGACGACATTG AGGGAACCAAGCATGAACTGGGGGTACAGGACCACACCACAGGAATATTGCAATGGGCACGATGGCGACTATTCC CGTGGAAAGGGTCTGGGAGGTAGCTCGGCAATCAACTTCGGGGTCTTTGCTATAGGCGCGCGGGATGACTACGAT GAGTGGGCATCTGAGGTGGATGACGATACCTTCGGATGGAAGGAGATGCATATCCGCTACAAGAATTTGGAGACC TTCGATGGTCGTGTACTTCCAAAAAATCAGAAATATGTCCGTTCGGTTGCTTCCGACCACGGCCACTCGGGTCCC TTGCGCGTCGGGTATGCCCAGGATTGGGAAAGGGACTTGGCACCCACGCTGGATGCATTCGAAGTGGCTGGACAC AAGCTCAACTTGGATCACAACTCCGGCAATCCCCTTGGCATGGCTGCAACAATCAATTCTGCTTGGAAGGGAGAG CGTACCACGGCTGTTGATATGTTTGAAAATGTTCCTCATAATCTTGTCGTTGTCACAGACAGCCCAGTACAGCGG GTCTTGTTGGAAGGCAAAAAGGCCGTTGGAGTAGAGGCTCAGGGCACAAAGTGTATATTTTATTCTGAACTCTTA CTATGCACTTCGTCTGACATGGATTACAGACTTCGCTTCTCGAGATGTGATTCTTTCTGCAGGCACACTCGACAC CCCAAAGATTCTAATGCACTCTGGAATCGGACCGGCTAAAGAGCTTGAGAAGTTCAACATTTCAGTGGTCAACGA TCTACCCGCCATTGGCCAGGGTCTCCGAGACCACTACTTGGTTCCTCTGGTTCTTGCCCGTAACCCTGAGACAAA TGACCGCAATTCCTTCTTCAAAGATCCCGCCGCCATGGAGGCTGCAATGAAAGAGTGGCTTCACGACAACACCGG CCTATGGAACCGATACTGCTGCCAGATCGGCACCGGCTGGTTTAAATCAGACCGTATCACCGCCTCGCCCGAATT CAAAGCGCTTCCAACATCCGTGCAAGAGTTCCTGAACCGCGAAACCATCCCCCACTACGAGATAGCCACCCACAT GCCCCTCCATTGCATGAAGCCCGAAATGTTCAAAGATTACAGCTATAGCTGTCTTGTAGCATTCATGATAAACGA ACAATCCCGCGGCGAAGTGCACCTGCAGTCCTCTGACCCAGACGTCCCGCTGCTGTTCGACCCGCGGTTCCTCGG ACATCCATACGATCGTCGCGCTTGTATCGAAATTTATCGGCACCTGCTCGATGTCAGTAGACAGGAGTGCTTTGC GAAGGACACTATCTCAACGCTGATGGGGCCTGCGTCTGATTCCGACGAGGACATCCTCGAGTTCTGGAAGAACAC GCTCTGTTCCAGCTGGCACATGACTGGCACGGTGAAGATGGGCAAGACTGGTGCCAGTGATGCTGCTGTTGACAC GCGTTTCCGTGTTCGGGGCATGGAGAACCTCCGCGTTGCTGATATGAGTGTTGTTCCTGTCCTCACTAATAACCA CACCCAGGCTACTGCTTACGTGACTGGTATTACTTGTGCTGATATCCTTATCAAGGAATATGGCCTCGATAAACA GTAA |