Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2441.t1
Gene name
Locationscaffold_03:44277..46081
Strand+
Gene length (bp)1804
Transcript length (bp)1701
Coding sequence length (bp)1701
Protein length (aa) 567

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00732 GMC_oxred_N GMC oxidoreductase 1.7E-52 7 303
PF05199 GMC_oxred_C GMC oxidoreductase 5.8E-33 417 551
PF05834 Lycopene_cycl Lycopene cyclase protein 1.2E-05 8 41

GO

GO Term Description Terminal node
GO:0055114 oxidation-reduction process Yes
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:0016491 oxidoreductase activity No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0008152 metabolic process No
GO:0048037 cofactor binding No
GO:0050662 coenzyme binding No
GO:0003824 catalytic activity No
GO:0005488 binding No
GO:1901265 nucleoside phosphate binding No
GO:1901363 heterocyclic compound binding No
GO:0000166 nucleotide binding No
GO:0043168 anion binding No
GO:0036094 small molecule binding No
GO:0097159 organic cyclic compound binding No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2441.t1
MESKNTYDFVIVGGGPAGCTVAAGLAKSAQRPKVLLLEAGGRNDDKALRVNGKRWTTLREPSMNWGYRTTPQEYC
NGHDGDYSRGKGLGGSSAINFGVFAIGARDDYDEWASEVDDDTFGWKEMHIRYKNLETFDGRVLPKNQKYVRSVA
SDHGHSGPLRVGYAQDWERDLAPTLDAFEVAGHKLNLDHNSGNPLGMAATINSAWKGERTTAVDMFENVPHNLVV
VTDSPVQRVLLEGKKAVGVEAQGTKYFASRDVILSAGTLDTPKILMHSGIGPAKELEKFNISVVNDLPAIGQGLR
DHYLVPLVLARNPETNDRNSFFKDPAAMEAAMKEWLHDNTGLWNRYCCQIGTGWFKSDRITASPEFKALPTSVQE
FLNRETIPHYEIATHMPLHCMKPEMFKDYSYSCLVAFMINEQSRGEVHLQSSDPDVPLLFDPRFLGHPYDRRACI
EIYRHLLDVSRQECFAKDTISTLMGPASDSDEDILEFWKNTLCSSWHMTGTVKMGKTGASDAAVDTRFRVRGMEN
LRVADMSVVPVLTNNHTQATAYVTGITCADILIKEYGLDKQ*
Coding >Pro_DTO377G3_2|g2441.t1
ATGGAATCTAAAAACACATACGACTTTGTCATCGTCGGAGGTGGCCCAGCTGGTTGCACCGTGGCTGCGGGGCTC
GCCAAATCAGCCCAAAGACCTAAAGTTCTACTTCTTGAAGCAGGTGGGCGCAATGATGACAAAGCTTTGCGAGTG
AATGGAAAGCGTTGGACGACATTGAGGGAACCAAGCATGAACTGGGGGTACAGGACCACACCACAGGAATATTGC
AATGGGCACGATGGCGACTATTCCCGTGGAAAGGGTCTGGGAGGTAGCTCGGCAATCAACTTCGGGGTCTTTGCT
ATAGGCGCGCGGGATGACTACGATGAGTGGGCATCTGAGGTGGATGACGATACCTTCGGATGGAAGGAGATGCAT
ATCCGCTACAAGAATTTGGAGACCTTCGATGGTCGTGTACTTCCAAAAAATCAGAAATATGTCCGTTCGGTTGCT
TCCGACCACGGCCACTCGGGTCCCTTGCGCGTCGGGTATGCCCAGGATTGGGAAAGGGACTTGGCACCCACGCTG
GATGCATTCGAAGTGGCTGGACACAAGCTCAACTTGGATCACAACTCCGGCAATCCCCTTGGCATGGCTGCAACA
ATCAATTCTGCTTGGAAGGGAGAGCGTACCACGGCTGTTGATATGTTTGAAAATGTTCCTCATAATCTTGTCGTT
GTCACAGACAGCCCAGTACAGCGGGTCTTGTTGGAAGGCAAAAAGGCCGTTGGAGTAGAGGCTCAGGGCACAAAG
TACTTCGCTTCTCGAGATGTGATTCTTTCTGCAGGCACACTCGACACCCCAAAGATTCTAATGCACTCTGGAATC
GGACCGGCTAAAGAGCTTGAGAAGTTCAACATTTCAGTGGTCAACGATCTACCCGCCATTGGCCAGGGTCTCCGA
GACCACTACTTGGTTCCTCTGGTTCTTGCCCGTAACCCTGAGACAAATGACCGCAATTCCTTCTTCAAAGATCCC
GCCGCCATGGAGGCTGCAATGAAAGAGTGGCTTCACGACAACACCGGCCTATGGAACCGATACTGCTGCCAGATC
GGCACCGGCTGGTTTAAATCAGACCGTATCACCGCCTCGCCCGAATTCAAAGCGCTTCCAACATCCGTGCAAGAG
TTCCTGAACCGCGAAACCATCCCCCACTACGAGATAGCCACCCACATGCCCCTCCATTGCATGAAGCCCGAAATG
TTCAAAGATTACAGCTATAGCTGTCTTGTAGCATTCATGATAAACGAACAATCCCGCGGCGAAGTGCACCTGCAG
TCCTCTGACCCAGACGTCCCGCTGCTGTTCGACCCGCGGTTCCTCGGACATCCATACGATCGTCGCGCTTGTATC
GAAATTTATCGGCACCTGCTCGATGTCAGTAGACAGGAGTGCTTTGCGAAGGACACTATCTCAACGCTGATGGGG
CCTGCGTCTGATTCCGACGAGGACATCCTCGAGTTCTGGAAGAACACGCTCTGTTCCAGCTGGCACATGACTGGC
ACGGTGAAGATGGGCAAGACTGGTGCCAGTGATGCTGCTGTTGACACGCGTTTCCGTGTTCGGGGCATGGAGAAC
CTCCGCGTTGCTGATATGAGTGTTGTTCCTGTCCTCACTAATAACCACACCCAGGCTACTGCTTACGTGACTGGT
ATTACTTGTGCTGATATCCTTATCAAGGAATATGGCCTCGATAAACAGTAA
Transcript >Pro_DTO377G3_2|g2441.t1
ATGGAATCTAAAAACACATACGACTTTGTCATCGTCGGAGGTGGCCCAGCTGGTTGCACCGTGGCTGCGGGGCTC
GCCAAATCAGCCCAAAGACCTAAAGTTCTACTTCTTGAAGCAGGTGGGCGCAATGATGACAAAGCTTTGCGAGTG
AATGGAAAGCGTTGGACGACATTGAGGGAACCAAGCATGAACTGGGGGTACAGGACCACACCACAGGAATATTGC
AATGGGCACGATGGCGACTATTCCCGTGGAAAGGGTCTGGGAGGTAGCTCGGCAATCAACTTCGGGGTCTTTGCT
ATAGGCGCGCGGGATGACTACGATGAGTGGGCATCTGAGGTGGATGACGATACCTTCGGATGGAAGGAGATGCAT
ATCCGCTACAAGAATTTGGAGACCTTCGATGGTCGTGTACTTCCAAAAAATCAGAAATATGTCCGTTCGGTTGCT
TCCGACCACGGCCACTCGGGTCCCTTGCGCGTCGGGTATGCCCAGGATTGGGAAAGGGACTTGGCACCCACGCTG
GATGCATTCGAAGTGGCTGGACACAAGCTCAACTTGGATCACAACTCCGGCAATCCCCTTGGCATGGCTGCAACA
ATCAATTCTGCTTGGAAGGGAGAGCGTACCACGGCTGTTGATATGTTTGAAAATGTTCCTCATAATCTTGTCGTT
GTCACAGACAGCCCAGTACAGCGGGTCTTGTTGGAAGGCAAAAAGGCCGTTGGAGTAGAGGCTCAGGGCACAAAG
TACTTCGCTTCTCGAGATGTGATTCTTTCTGCAGGCACACTCGACACCCCAAAGATTCTAATGCACTCTGGAATC
GGACCGGCTAAAGAGCTTGAGAAGTTCAACATTTCAGTGGTCAACGATCTACCCGCCATTGGCCAGGGTCTCCGA
GACCACTACTTGGTTCCTCTGGTTCTTGCCCGTAACCCTGAGACAAATGACCGCAATTCCTTCTTCAAAGATCCC
GCCGCCATGGAGGCTGCAATGAAAGAGTGGCTTCACGACAACACCGGCCTATGGAACCGATACTGCTGCCAGATC
GGCACCGGCTGGTTTAAATCAGACCGTATCACCGCCTCGCCCGAATTCAAAGCGCTTCCAACATCCGTGCAAGAG
TTCCTGAACCGCGAAACCATCCCCCACTACGAGATAGCCACCCACATGCCCCTCCATTGCATGAAGCCCGAAATG
TTCAAAGATTACAGCTATAGCTGTCTTGTAGCATTCATGATAAACGAACAATCCCGCGGCGAAGTGCACCTGCAG
TCCTCTGACCCAGACGTCCCGCTGCTGTTCGACCCGCGGTTCCTCGGACATCCATACGATCGTCGCGCTTGTATC
GAAATTTATCGGCACCTGCTCGATGTCAGTAGACAGGAGTGCTTTGCGAAGGACACTATCTCAACGCTGATGGGG
CCTGCGTCTGATTCCGACGAGGACATCCTCGAGTTCTGGAAGAACACGCTCTGTTCCAGCTGGCACATGACTGGC
ACGGTGAAGATGGGCAAGACTGGTGCCAGTGATGCTGCTGTTGACACGCGTTTCCGTGTTCGGGGCATGGAGAAC
CTCCGCGTTGCTGATATGAGTGTTGTTCCTGTCCTCACTAATAACCACACCCAGGCTACTGCTTACGTGACTGGT
ATTACTTGTGCTGATATCCTTATCAAGGAATATGGCCTCGATAAACAGTAA
Gene >Pro_DTO377G3_2|g2441.t1
ATGGAATCTAAAAACACATACGACTTTGTCATCGTCGGAGGTAATCGTGCACTATACACACCTGCAATCTCTCAT
GCTCATCATTGAACAGGTGGCCCAGCTGGTTGCACCGTGGCTGCGGGGCTCGCCAAATCAGCCCAAAGACCTAAA
GTTCTACTTCTTGAAGCAGGTGGGCGCAATGATGACAAAGCTTTGCGAGTGAATGGAAAGCGTTGGACGACATTG
AGGGAACCAAGCATGAACTGGGGGTACAGGACCACACCACAGGAATATTGCAATGGGCACGATGGCGACTATTCC
CGTGGAAAGGGTCTGGGAGGTAGCTCGGCAATCAACTTCGGGGTCTTTGCTATAGGCGCGCGGGATGACTACGAT
GAGTGGGCATCTGAGGTGGATGACGATACCTTCGGATGGAAGGAGATGCATATCCGCTACAAGAATTTGGAGACC
TTCGATGGTCGTGTACTTCCAAAAAATCAGAAATATGTCCGTTCGGTTGCTTCCGACCACGGCCACTCGGGTCCC
TTGCGCGTCGGGTATGCCCAGGATTGGGAAAGGGACTTGGCACCCACGCTGGATGCATTCGAAGTGGCTGGACAC
AAGCTCAACTTGGATCACAACTCCGGCAATCCCCTTGGCATGGCTGCAACAATCAATTCTGCTTGGAAGGGAGAG
CGTACCACGGCTGTTGATATGTTTGAAAATGTTCCTCATAATCTTGTCGTTGTCACAGACAGCCCAGTACAGCGG
GTCTTGTTGGAAGGCAAAAAGGCCGTTGGAGTAGAGGCTCAGGGCACAAAGTGTATATTTTATTCTGAACTCTTA
CTATGCACTTCGTCTGACATGGATTACAGACTTCGCTTCTCGAGATGTGATTCTTTCTGCAGGCACACTCGACAC
CCCAAAGATTCTAATGCACTCTGGAATCGGACCGGCTAAAGAGCTTGAGAAGTTCAACATTTCAGTGGTCAACGA
TCTACCCGCCATTGGCCAGGGTCTCCGAGACCACTACTTGGTTCCTCTGGTTCTTGCCCGTAACCCTGAGACAAA
TGACCGCAATTCCTTCTTCAAAGATCCCGCCGCCATGGAGGCTGCAATGAAAGAGTGGCTTCACGACAACACCGG
CCTATGGAACCGATACTGCTGCCAGATCGGCACCGGCTGGTTTAAATCAGACCGTATCACCGCCTCGCCCGAATT
CAAAGCGCTTCCAACATCCGTGCAAGAGTTCCTGAACCGCGAAACCATCCCCCACTACGAGATAGCCACCCACAT
GCCCCTCCATTGCATGAAGCCCGAAATGTTCAAAGATTACAGCTATAGCTGTCTTGTAGCATTCATGATAAACGA
ACAATCCCGCGGCGAAGTGCACCTGCAGTCCTCTGACCCAGACGTCCCGCTGCTGTTCGACCCGCGGTTCCTCGG
ACATCCATACGATCGTCGCGCTTGTATCGAAATTTATCGGCACCTGCTCGATGTCAGTAGACAGGAGTGCTTTGC
GAAGGACACTATCTCAACGCTGATGGGGCCTGCGTCTGATTCCGACGAGGACATCCTCGAGTTCTGGAAGAACAC
GCTCTGTTCCAGCTGGCACATGACTGGCACGGTGAAGATGGGCAAGACTGGTGCCAGTGATGCTGCTGTTGACAC
GCGTTTCCGTGTTCGGGGCATGGAGAACCTCCGCGTTGCTGATATGAGTGTTGTTCCTGTCCTCACTAATAACCA
CACCCAGGCTACTGCTTACGTGACTGGTATTACTTGTGCTGATATCCTTATCAAGGAATATGGCCTCGATAAACA
GTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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