Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2441.t1
Gene name
Locationscaffold_03:44277..46081
Strand+
Gene length (bp)1804
Transcript length (bp)1701
Coding sequence length (bp)1701
Protein length (aa) 567

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00732 GMC_oxred_N GMC oxidoreductase 1.8E-52 7 303
PF05199 GMC_oxred_C GMC oxidoreductase 1.5E-32 417 550
PF05834 Lycopene_cycl Lycopene cyclase protein 1.3E-05 8 41

GO

GO Term Description Terminal node
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:1901265 nucleoside phosphate binding No
GO:0016491 oxidoreductase activity No
GO:0097159 organic cyclic compound binding No
GO:0005488 binding No
GO:0043167 ion binding No
GO:0000166 nucleotide binding No
GO:0043168 anion binding No
GO:1901363 heterocyclic compound binding No
GO:0003674 molecular_function No
GO:0003824 catalytic activity No
GO:0036094 small molecule binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2441.t1
MESKNTYDFVIVGGGPAGCTVAAGLAKSAQRPKVLLLEAGGRNDDKALRVNGKRWTTLREPSMNWGYRTTPQEYC
NGHDGDYSRGKGLGGSSAINFGVFAIGARDDYDEWASEVDDDTFGWKEMHIRYKNLETFDGRVLPKNQKYVRSVA
SDHGHSGPLRVGYAQDWERDLAPTLDAFEVAGHKLNLDHNSGNPLGMAATINSAWKGERTTAVDMFENVPHNLVV
VTDSPVQRVLLEGKKAVGVEAQGTKYFASRDVILSAGTLDTPKILMHSGIGPAKELEKFNISVVNDLPAIGQGLR
DHYLVPLVLARNPETNDRNSFFKDPAAMEAAMKEWLHDNTGLWNRYCCQIGTGWFKSDRITASPEFKALPTSVQE
FLNRETIPHYEIATHMPLHCMKPEMFKDYSYSCLVAFMINEQSRGEVHLQSSDPDVPLLFDPRFLGHPYDRRACI
EIYRHLLDVSRQECFAKDTISTLMGPASDSDEDILEFWKNTLCSSWHMTGTVKMGKTGASDAAVDTRFRVRGMEN
LRVADMSVVPVLTNNHTQATAYVTGITCADILIKEYGLDKQ*
Coding >Pro_DTO377G3_2|g2441.t1
ATGGAATCTAAAAACACATACGACTTTGTCATCGTCGGAGGTGGCCCAGCTGGTTGCACCGTGGCTGCGGGGCTC
GCCAAATCAGCCCAAAGACCTAAAGTTCTACTTCTTGAAGCAGGTGGGCGCAATGATGACAAAGCTTTGCGAGTG
AATGGAAAGCGTTGGACGACATTGAGGGAACCAAGCATGAACTGGGGGTACAGGACCACACCACAGGAATATTGC
AATGGGCACGATGGCGACTATTCCCGTGGAAAGGGTCTGGGAGGTAGCTCGGCAATCAACTTCGGGGTCTTTGCT
ATAGGCGCGCGGGATGACTACGATGAGTGGGCATCTGAGGTGGATGACGATACCTTCGGATGGAAGGAGATGCAT
ATCCGCTACAAGAATTTGGAGACCTTCGATGGTCGTGTACTTCCAAAAAATCAGAAATATGTCCGTTCGGTTGCT
TCCGACCACGGCCACTCGGGTCCCTTGCGCGTCGGGTATGCCCAGGATTGGGAAAGGGACTTGGCACCCACGCTG
GATGCATTCGAAGTGGCTGGACACAAGCTCAACTTGGATCACAACTCCGGCAATCCCCTTGGCATGGCTGCAACA
ATCAATTCTGCTTGGAAGGGAGAGCGTACCACGGCTGTTGATATGTTTGAAAATGTTCCTCATAATCTTGTCGTT
GTCACAGACAGCCCAGTACAGCGGGTCTTGTTGGAAGGCAAAAAGGCCGTTGGAGTAGAGGCTCAGGGCACAAAG
TACTTCGCTTCTCGAGATGTGATTCTTTCTGCAGGCACACTCGACACCCCAAAGATTCTAATGCACTCTGGAATC
GGACCGGCTAAAGAGCTTGAGAAGTTCAACATTTCAGTGGTCAACGATCTACCCGCCATTGGCCAGGGTCTCCGA
GACCACTACTTGGTTCCTCTGGTTCTTGCCCGTAACCCTGAGACAAATGACCGCAATTCCTTCTTCAAAGATCCC
GCCGCCATGGAGGCTGCAATGAAAGAGTGGCTTCACGACAACACCGGCCTATGGAACCGATACTGCTGCCAGATC
GGCACCGGCTGGTTTAAATCAGACCGTATCACCGCCTCGCCCGAATTCAAAGCGCTTCCAACATCCGTGCAAGAG
TTCCTGAACCGCGAAACCATCCCCCACTACGAGATAGCCACCCACATGCCCCTCCATTGCATGAAGCCCGAAATG
TTCAAAGATTACAGCTATAGCTGTCTTGTAGCATTCATGATAAACGAACAATCCCGCGGCGAAGTGCACCTGCAG
TCCTCTGACCCAGACGTCCCGCTGCTGTTCGACCCGCGGTTCCTCGGACATCCATACGATCGTCGCGCTTGTATC
GAAATTTATCGGCACCTGCTCGATGTCAGTAGACAGGAGTGCTTTGCGAAGGACACTATCTCAACGCTGATGGGG
CCTGCGTCTGATTCCGACGAGGACATCCTCGAGTTCTGGAAGAACACGCTCTGTTCCAGCTGGCACATGACTGGC
ACGGTGAAGATGGGCAAGACTGGTGCCAGTGATGCTGCTGTTGACACGCGTTTCCGTGTTCGGGGCATGGAGAAC
CTCCGCGTTGCTGATATGAGTGTTGTTCCTGTCCTCACTAATAACCACACCCAGGCTACTGCTTACGTGACTGGT
ATTACTTGTGCTGATATCCTTATCAAGGAATATGGCCTCGATAAACAGTAA
Transcript >Pro_DTO377G3_2|g2441.t1
ATGGAATCTAAAAACACATACGACTTTGTCATCGTCGGAGGTGGCCCAGCTGGTTGCACCGTGGCTGCGGGGCTC
GCCAAATCAGCCCAAAGACCTAAAGTTCTACTTCTTGAAGCAGGTGGGCGCAATGATGACAAAGCTTTGCGAGTG
AATGGAAAGCGTTGGACGACATTGAGGGAACCAAGCATGAACTGGGGGTACAGGACCACACCACAGGAATATTGC
AATGGGCACGATGGCGACTATTCCCGTGGAAAGGGTCTGGGAGGTAGCTCGGCAATCAACTTCGGGGTCTTTGCT
ATAGGCGCGCGGGATGACTACGATGAGTGGGCATCTGAGGTGGATGACGATACCTTCGGATGGAAGGAGATGCAT
ATCCGCTACAAGAATTTGGAGACCTTCGATGGTCGTGTACTTCCAAAAAATCAGAAATATGTCCGTTCGGTTGCT
TCCGACCACGGCCACTCGGGTCCCTTGCGCGTCGGGTATGCCCAGGATTGGGAAAGGGACTTGGCACCCACGCTG
GATGCATTCGAAGTGGCTGGACACAAGCTCAACTTGGATCACAACTCCGGCAATCCCCTTGGCATGGCTGCAACA
ATCAATTCTGCTTGGAAGGGAGAGCGTACCACGGCTGTTGATATGTTTGAAAATGTTCCTCATAATCTTGTCGTT
GTCACAGACAGCCCAGTACAGCGGGTCTTGTTGGAAGGCAAAAAGGCCGTTGGAGTAGAGGCTCAGGGCACAAAG
TACTTCGCTTCTCGAGATGTGATTCTTTCTGCAGGCACACTCGACACCCCAAAGATTCTAATGCACTCTGGAATC
GGACCGGCTAAAGAGCTTGAGAAGTTCAACATTTCAGTGGTCAACGATCTACCCGCCATTGGCCAGGGTCTCCGA
GACCACTACTTGGTTCCTCTGGTTCTTGCCCGTAACCCTGAGACAAATGACCGCAATTCCTTCTTCAAAGATCCC
GCCGCCATGGAGGCTGCAATGAAAGAGTGGCTTCACGACAACACCGGCCTATGGAACCGATACTGCTGCCAGATC
GGCACCGGCTGGTTTAAATCAGACCGTATCACCGCCTCGCCCGAATTCAAAGCGCTTCCAACATCCGTGCAAGAG
TTCCTGAACCGCGAAACCATCCCCCACTACGAGATAGCCACCCACATGCCCCTCCATTGCATGAAGCCCGAAATG
TTCAAAGATTACAGCTATAGCTGTCTTGTAGCATTCATGATAAACGAACAATCCCGCGGCGAAGTGCACCTGCAG
TCCTCTGACCCAGACGTCCCGCTGCTGTTCGACCCGCGGTTCCTCGGACATCCATACGATCGTCGCGCTTGTATC
GAAATTTATCGGCACCTGCTCGATGTCAGTAGACAGGAGTGCTTTGCGAAGGACACTATCTCAACGCTGATGGGG
CCTGCGTCTGATTCCGACGAGGACATCCTCGAGTTCTGGAAGAACACGCTCTGTTCCAGCTGGCACATGACTGGC
ACGGTGAAGATGGGCAAGACTGGTGCCAGTGATGCTGCTGTTGACACGCGTTTCCGTGTTCGGGGCATGGAGAAC
CTCCGCGTTGCTGATATGAGTGTTGTTCCTGTCCTCACTAATAACCACACCCAGGCTACTGCTTACGTGACTGGT
ATTACTTGTGCTGATATCCTTATCAAGGAATATGGCCTCGATAAACAGTAA
Gene >Pro_DTO377G3_2|g2441.t1
ATGGAATCTAAAAACACATACGACTTTGTCATCGTCGGAGGTAATCGTGCACTATACACACCTGCAATCTCTCAT
GCTCATCATTGAACAGGTGGCCCAGCTGGTTGCACCGTGGCTGCGGGGCTCGCCAAATCAGCCCAAAGACCTAAA
GTTCTACTTCTTGAAGCAGGTGGGCGCAATGATGACAAAGCTTTGCGAGTGAATGGAAAGCGTTGGACGACATTG
AGGGAACCAAGCATGAACTGGGGGTACAGGACCACACCACAGGAATATTGCAATGGGCACGATGGCGACTATTCC
CGTGGAAAGGGTCTGGGAGGTAGCTCGGCAATCAACTTCGGGGTCTTTGCTATAGGCGCGCGGGATGACTACGAT
GAGTGGGCATCTGAGGTGGATGACGATACCTTCGGATGGAAGGAGATGCATATCCGCTACAAGAATTTGGAGACC
TTCGATGGTCGTGTACTTCCAAAAAATCAGAAATATGTCCGTTCGGTTGCTTCCGACCACGGCCACTCGGGTCCC
TTGCGCGTCGGGTATGCCCAGGATTGGGAAAGGGACTTGGCACCCACGCTGGATGCATTCGAAGTGGCTGGACAC
AAGCTCAACTTGGATCACAACTCCGGCAATCCCCTTGGCATGGCTGCAACAATCAATTCTGCTTGGAAGGGAGAG
CGTACCACGGCTGTTGATATGTTTGAAAATGTTCCTCATAATCTTGTCGTTGTCACAGACAGCCCAGTACAGCGG
GTCTTGTTGGAAGGCAAAAAGGCCGTTGGAGTAGAGGCTCAGGGCACAAAGTGTATATTTTATTCTGAACTCTTA
CTATGCACTTCGTCTGACATGGATTACAGACTTCGCTTCTCGAGATGTGATTCTTTCTGCAGGCACACTCGACAC
CCCAAAGATTCTAATGCACTCTGGAATCGGACCGGCTAAAGAGCTTGAGAAGTTCAACATTTCAGTGGTCAACGA
TCTACCCGCCATTGGCCAGGGTCTCCGAGACCACTACTTGGTTCCTCTGGTTCTTGCCCGTAACCCTGAGACAAA
TGACCGCAATTCCTTCTTCAAAGATCCCGCCGCCATGGAGGCTGCAATGAAAGAGTGGCTTCACGACAACACCGG
CCTATGGAACCGATACTGCTGCCAGATCGGCACCGGCTGGTTTAAATCAGACCGTATCACCGCCTCGCCCGAATT
CAAAGCGCTTCCAACATCCGTGCAAGAGTTCCTGAACCGCGAAACCATCCCCCACTACGAGATAGCCACCCACAT
GCCCCTCCATTGCATGAAGCCCGAAATGTTCAAAGATTACAGCTATAGCTGTCTTGTAGCATTCATGATAAACGA
ACAATCCCGCGGCGAAGTGCACCTGCAGTCCTCTGACCCAGACGTCCCGCTGCTGTTCGACCCGCGGTTCCTCGG
ACATCCATACGATCGTCGCGCTTGTATCGAAATTTATCGGCACCTGCTCGATGTCAGTAGACAGGAGTGCTTTGC
GAAGGACACTATCTCAACGCTGATGGGGCCTGCGTCTGATTCCGACGAGGACATCCTCGAGTTCTGGAAGAACAC
GCTCTGTTCCAGCTGGCACATGACTGGCACGGTGAAGATGGGCAAGACTGGTGCCAGTGATGCTGCTGTTGACAC
GCGTTTCCGTGTTCGGGGCATGGAGAACCTCCGCGTTGCTGATATGAGTGTTGTTCCTGTCCTCACTAATAACCA
CACCCAGGCTACTGCTTACGTGACTGGTATTACTTGTGCTGATATCCTTATCAAGGAATATGGCCTCGATAAACA
GTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail