Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2428.t1
Gene name
Locationscaffold_03:15429..16324
Strand+
Gene length (bp)895
Transcript length (bp)843
Coding sequence length (bp)843
Protein length (aa) 281

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14748 P5CR_dimer Pyrroline-5-carboxylate reductase dimerisation 5.2E-35 173 277
PF03807 F420_oxidored NADP oxidoreductase coenzyme F420-dependent 4.8E-17 8 104

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2428.t1
MPSIQESKLAFIGGGNMASAIIGGLLSKGVNKQNICVSEPWDVNREKMAALGVRTTTSNVEAGGDADLVIIAVKP
QVAKSVCEELGGAWSPRATLPVVVSIAAGITLDSLKGWLTTSDSRTAHTVRVMPNTPALVGEGASGAFAGADITP
DEKDLVNAMLGSVSKATEWVDREELLDVVTGLSGSGPAYFFAMVEHLIASATALGLPEEQATRLATQTCLGAGKM
LVESADSPSQLRKNVTSPNGTTYAALQTFESLNFKEIVDKSVQAATARSAELGKS*
Coding >Pro_DTO377G3_2|g2428.t1
ATGCCTTCCATTCAAGAGAGCAAACTGGCCTTCATTGGCGGTGGCAACATGGCCTCCGCCATCATTGGCGGCCTG
CTGAGCAAGGGGGTCAACAAGCAGAATATCTGCGTCTCGGAGCCGTGGGATGTCAACCGCGAGAAGATGGCCGCA
CTCGGAGTGCGCACCACCACTTCTAACGTTGAGGCTGGAGGCGATGCCGATTTGGTCATCATTGCGGTCAAGCCA
CAAGTTGCCAAGAGTGTGTGCGAGGAGCTCGGTGGTGCCTGGTCGCCGCGTGCGACTTTGCCCGTTGTCGTCAGC
ATTGCTGCGGGTATTACCCTTGATAGCTTGAAGGGGTGGTTGACAACGAGCGATAGCCGTACCGCCCACACTGTT
CGCGTGATGCCCAACACCCCTGCCCTAGTTGGTGAGGGTGCTTCGGGTGCTTTTGCCGGCGCCGACATTACCCCA
GATGAGAAGGATCTTGTCAATGCTATGCTCGGAAGTGTTAGCAAGGCTACCGAGTGGGTGGACCGCGAAGAACTC
CTCGATGTTGTCACTGGATTGTCCGGATCTGGACCCGCCTACTTCTTTGCCATGGTCGAGCACTTGATCGCAAGT
GCAACTGCTCTAGGCCTCCCTGAGGAACAAGCCACTCGGTTGGCTACACAGACATGTCTTGGTGCTGGCAAGATG
CTGGTTGAGAGCGCTGACAGCCCTTCTCAGCTGCGTAAGAACGTTACTAGCCCCAACGGCACCACATATGCTGCT
CTCCAGACATTTGAGTCTCTCAACTTTAAAGAGATCGTCGACAAGTCTGTCCAAGCTGCCACTGCTCGGTCTGCT
GAGCTCGGAAAGTCATAG
Transcript >Pro_DTO377G3_2|g2428.t1
ATGCCTTCCATTCAAGAGAGCAAACTGGCCTTCATTGGCGGTGGCAACATGGCCTCCGCCATCATTGGCGGCCTG
CTGAGCAAGGGGGTCAACAAGCAGAATATCTGCGTCTCGGAGCCGTGGGATGTCAACCGCGAGAAGATGGCCGCA
CTCGGAGTGCGCACCACCACTTCTAACGTTGAGGCTGGAGGCGATGCCGATTTGGTCATCATTGCGGTCAAGCCA
CAAGTTGCCAAGAGTGTGTGCGAGGAGCTCGGTGGTGCCTGGTCGCCGCGTGCGACTTTGCCCGTTGTCGTCAGC
ATTGCTGCGGGTATTACCCTTGATAGCTTGAAGGGGTGGTTGACAACGAGCGATAGCCGTACCGCCCACACTGTT
CGCGTGATGCCCAACACCCCTGCCCTAGTTGGTGAGGGTGCTTCGGGTGCTTTTGCCGGCGCCGACATTACCCCA
GATGAGAAGGATCTTGTCAATGCTATGCTCGGAAGTGTTAGCAAGGCTACCGAGTGGGTGGACCGCGAAGAACTC
CTCGATGTTGTCACTGGATTGTCCGGATCTGGACCCGCCTACTTCTTTGCCATGGTCGAGCACTTGATCGCAAGT
GCAACTGCTCTAGGCCTCCCTGAGGAACAAGCCACTCGGTTGGCTACACAGACATGTCTTGGTGCTGGCAAGATG
CTGGTTGAGAGCGCTGACAGCCCTTCTCAGCTGCGTAAGAACGTTACTAGCCCCAACGGCACCACATATGCTGCT
CTCCAGACATTTGAGTCTCTCAACTTTAAAGAGATCGTCGACAAGTCTGTCCAAGCTGCCACTGCTCGGTCTGCT
GAGCTCGGAAAGTCATAG
Gene >Pro_DTO377G3_2|g2428.t1
ATGCCTTCCATTCAAGAGAGCAAACTGGCCTTCATTGGCGGTGGCAACATGGCCTCCGCCATCATTGGCGGCCTG
CTGAGCAAGGGGGTCAACAAGCAGAATATCTGCGTCTCGGAGCCGTGGGATGTCAACCGCGAGAAGATGGCCGCA
CTCGGAGTGCGCACCACCACTTCTAACGTTGAGGCTGGAGGCGATGCCGATTTGGTCATCATTGCGGTCAAGCCA
CAAGTTGCCAAGAGTGTGTGCGAGGAGCTCGGTGGTGCCTGGTCGCCGCGTGCGACTTTGCCCGTTGTCGTCAGC
ATTGCTGCGGGTATTACCCTTGATAGCTTGAAGGGGTGGTTGACAACGAGCGATAGCCGTACCGCCCACACTGTT
CGCGTGATGCCCAACACCCCTGCCCTAGTTGGTGAGGGTGCTTCGGGTGCTTTTGCCGGCGCCGACATTACCCCA
GATGAGAAGGATCTTGTCAATGCTATGCTCGGAAGTGTTAGCAAGGCTACCGAGTGGGTGGACCGCGAAGAACTC
CTCGATGTTGTCACTGGATTGTCCGGTAAGTCTCCTACGTAAAAGGCCATCAACAAGTATCGATCTGACCCAATC
AGGATCTGGACCCGCCTACTTCTTTGCCATGGTCGAGCACTTGATCGCAAGTGCAACTGCTCTAGGCCTCCCTGA
GGAACAAGCCACTCGGTTGGCTACACAGACATGTCTTGGTGCTGGCAAGATGCTGGTTGAGAGCGCTGACAGCCC
TTCTCAGCTGCGTAAGAACGTTACTAGCCCCAACGGCACCACATATGCTGCTCTCCAGACATTTGAGTCTCTCAA
CTTTAAAGAGATCGTCGACAAGTCTGTCCAAGCTGCCACTGCTCGGTCTGCTGAGCTCGGAAAGTCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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